You are here

Home

KYF_002500-T1, KYF_002500-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002500-T1
Unique NameKYF_002500-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3629929..3632343+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002500-T1 ID=KYF_002500-T1|Name=KYF_002500-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2415bp|location=Sequence derived from alignment at ch2:3629929..3632343+ (Aspergillus niger KYF3)
ATGGCGCACTCAATGTCTCGTCCCGTGGCTGCCACTGCCGCTGCTCTGCT
GGCTCTGGCTCTTCCTCAAGCTCTTGCCCAGGCCAACACCAGCTACGTCG
ACTACAACATCGAAGCCAACCCGGACTTGTATCCTTTGTGCATAGAAACC
ATCCCACTGAGCTTCCCCGACTGCCAGAATGGTCCCCTGCGCAGCCATCT
CATCTGTGATGAAACAGCCACCCCCTATGACCGAGCAGCATCGCTCATCT
CGCTCTTCACCCTGGACGAGCTGATCGCCAACACCGGCAACACCGGCCTC
GGTGTCTCCCGACTGGGCCTCCCTGCATACCAAGTATGGAGTGAAGCTCT
TCACGGCCTCGACCGTGCCAATTTCAGCGACTCAGGAGCCTACAATTGGG
CCACCTCATTCCCCCAGCCCATCCTGACCACCGCGGCCCTCAACCGCACC
CTCATCCACCAAATCGCCTCCATCATCTCTACCCAAGGCCGCGCCTTCAA
CAACGCCGGCCGCTACGGCCTCGACGTCTACGCCCCCAACATCAACACCT
TCCGCCACCCCGTCTGGGGTCGCGGACAAGAAACCCCAGGAGAGGACGTC
TCTCTCGCCGCCGTCTACGCCTACGAATACATCACCGGCATCCAGGGTCC
CGACCCAGAATCAAACCTCAAACTCGCCGCCACGGCCAAGCACTACGCCG
GCTATGACATCGAGAACTGGCACAACCACTCCCGCCTGGGCAACGACATG
AACATCACCCAGCAAGACCTCTCCGAATACTACACGCCCCAATTCCACGT
CGCCGCCCGCGACGCCAAAGTCCAGAGTGTCATGTGCGCCTACAACGCCG
TCAACGGCGTCCCTGCCTGCGCCGACTCCTACTTCCTCCAGACCCTCCTC
CGCGACACCTTCGGATTTGTCGACCACGGATACGTCTCCAGCGACTGCGA
TGCCGCCTATAACATCTACAACCCCCACGGCTATGCCTCCTCCCAGGCTG
CCGCTGCCGCTGAGGCCATCCTCGCCGGCACCGACATCGACTGCGGTACC
ACCTACCAATGGCACCTGAACGAGTCCATCGCTGCGGGAGATCTCTCTCG
CGATGATATTGAGCAGGGTGTGATTCGTCTCTACACGACCCTCGTGCAGG
CCGGATACTTCGACTCCAACACCACAAAGGCGAACAACCCCTACCGCGAC
CTCTCCTGGTCCGACGTCCTTGAGACGGACGCATGGAACATCTCCTACCA
AGCCGCGACGCAGGGCATTGTCCTTCTCAAGAACTCCAACAACGTCCTCC
CCCTCACCGAGAAAGCTTACCCACCATCCAACACCACCGTCGCCCTCATC
GGTCCCTGGGCCAACGCCACCACCCAACTCCTGGGCAACTACTACGGCAA
CGCTCCCTACATGATCAGCCCCCGCGCCGCCTTCGAAGAAGCCGGATACA
AAGTCAACTTCGCCGAGGGCACCGGTATCTCCTCCACAAGCACCTCGGGC
TTCGCTGCCGCCTTATCCGCCGCACAATCCGCCGACGTGATAATCTACGC
CGGTGGTATCGACAATACCCTTGAAGCGGAGGCACTGGATCGAGAGAGTA
TCGCGTGGCCGGGTAACCAACTGGACTTGATCCAGAAGCTCGCCTCGGCG
GCCGGAAAGAAGCCGCTCATCGTCCTCCAAATGGGCGGCGGACAGGTCGA
TTCCTCTTCGCTCAAGAACAACACCAATGTTTCTGCACTTCTCTGGGGCG
GATACCCCGGCCAATCTGGCGGCTTCGCTTTGCGGGATATCATCACGGGG
AAGAAGAACCCCGCGGGTAGACTAGTCACGACGCAGTACCCTGCCAGCTA
CGCGGAGGAGTTCCCGGCGACAGATATGAACCTTCGTCCTGAGGGTGATA
ACCCTGGTCAGACGTATAAATGGTACACCGGCGAAGCCGTGTACGAGTTC
GGCCACGGGTTATTCTACACGACCTTCGCGGAATCCTCCAGCAACACCAC
TACAAAGGAAGTTAAGCTCAACATCCAGGACATTCTTTCCCAGACACACG
AAGACCTGGCGTCGATTACCCAGCTCCCTGTGCTGAACTTCACCGCCAAT
ATCAGGAACACTGGAAAGCTGGAATCGGATTACACCGCTATGGTATTCGC
CAATACCTCTGATGCCGGGCCGGCGCCGTATCCCAAGAAGTGGCTGGTCG
GGTGGGATCGGCTTGGGGAGGTGAAGGTCGGGGAGACGAGGGAGTTGAGG
GTCCCCGTTGAGGTGGGGAGCTTTGCGAGGGTGAATGAGGATGGCGATTG
GGTGGTGTTTCCGGGAACGTTTGAGTTGGCGTTGAATTTGGAGAGGAAGG
TTCGGGTGAAGGTTGTTCTTGAGGGTGAGGAGGAAGTCGTGCTGAAGTGG
CCGGGGAAGGAGTAG
back to top

Coding sequence (CDS) from alignment at ch2:3629929..3632343+

>KYF_002500-T1 ID=KYF_002500-T1|Name=KYF_002500-T1|organism=Aspergillus niger KYF3|type=CDS|length=2415bp|location=Sequence derived from alignment at ch2:3629929..3632343+ (Aspergillus niger KYF3)
ATGGCGCACTCAATGTCTCGTCCCGTGGCTGCCACTGCCGCTGCTCTGCT
GGCTCTGGCTCTTCCTCAAGCTCTTGCCCAGGCCAACACCAGCTACGTCG
ACTACAACATCGAAGCCAACCCGGACTTGTATCCTTTGTGCATAGAAACC
ATCCCACTGAGCTTCCCCGACTGCCAGAATGGTCCCCTGCGCAGCCATCT
CATCTGTGATGAAACAGCCACCCCCTATGACCGAGCAGCATCGCTCATCT
CGCTCTTCACCCTGGACGAGCTGATCGCCAACACCGGCAACACCGGCCTC
GGTGTCTCCCGACTGGGCCTCCCTGCATACCAAGTATGGAGTGAAGCTCT
TCACGGCCTCGACCGTGCCAATTTCAGCGACTCAGGAGCCTACAATTGGG
CCACCTCATTCCCCCAGCCCATCCTGACCACCGCGGCCCTCAACCGCACC
CTCATCCACCAAATCGCCTCCATCATCTCTACCCAAGGCCGCGCCTTCAA
CAACGCCGGCCGCTACGGCCTCGACGTCTACGCCCCCAACATCAACACCT
TCCGCCACCCCGTCTGGGGTCGCGGACAAGAAACCCCAGGAGAGGACGTC
TCTCTCGCCGCCGTCTACGCCTACGAATACATCACCGGCATCCAGGGTCC
CGACCCAGAATCAAACCTCAAACTCGCCGCCACGGCCAAGCACTACGCCG
GCTATGACATCGAGAACTGGCACAACCACTCCCGCCTGGGCAACGACATG
AACATCACCCAGCAAGACCTCTCCGAATACTACACGCCCCAATTCCACGT
CGCCGCCCGCGACGCCAAAGTCCAGAGTGTCATGTGCGCCTACAACGCCG
TCAACGGCGTCCCTGCCTGCGCCGACTCCTACTTCCTCCAGACCCTCCTC
CGCGACACCTTCGGATTTGTCGACCACGGATACGTCTCCAGCGACTGCGA
TGCCGCCTATAACATCTACAACCCCCACGGCTATGCCTCCTCCCAGGCTG
CCGCTGCCGCTGAGGCCATCCTCGCCGGCACCGACATCGACTGCGGTACC
ACCTACCAATGGCACCTGAACGAGTCCATCGCTGCGGGAGATCTCTCTCG
CGATGATATTGAGCAGGGTGTGATTCGTCTCTACACGACCCTCGTGCAGG
CCGGATACTTCGACTCCAACACCACAAAGGCGAACAACCCCTACCGCGAC
CTCTCCTGGTCCGACGTCCTTGAGACGGACGCATGGAACATCTCCTACCA
AGCCGCGACGCAGGGCATTGTCCTTCTCAAGAACTCCAACAACGTCCTCC
CCCTCACCGAGAAAGCTTACCCACCATCCAACACCACCGTCGCCCTCATC
GGTCCCTGGGCCAACGCCACCACCCAACTCCTGGGCAACTACTACGGCAA
CGCTCCCTACATGATCAGCCCCCGCGCCGCCTTCGAAGAAGCCGGATACA
AAGTCAACTTCGCCGAGGGCACCGGTATCTCCTCCACAAGCACCTCGGGC
TTCGCTGCCGCCTTATCCGCCGCACAATCCGCCGACGTGATAATCTACGC
CGGTGGTATCGACAATACCCTTGAAGCGGAGGCACTGGATCGAGAGAGTA
TCGCGTGGCCGGGTAACCAACTGGACTTGATCCAGAAGCTCGCCTCGGCG
GCCGGAAAGAAGCCGCTCATCGTCCTCCAAATGGGCGGCGGACAGGTCGA
TTCCTCTTCGCTCAAGAACAACACCAATGTTTCTGCACTTCTCTGGGGCG
GATACCCCGGCCAATCTGGCGGCTTCGCTTTGCGGGATATCATCACGGGG
AAGAAGAACCCCGCGGGTAGACTAGTCACGACGCAGTACCCTGCCAGCTA
CGCGGAGGAGTTCCCGGCGACAGATATGAACCTTCGTCCTGAGGGTGATA
ACCCTGGTCAGACGTATAAATGGTACACCGGCGAAGCCGTGTACGAGTTC
GGCCACGGGTTATTCTACACGACCTTCGCGGAATCCTCCAGCAACACCAC
TACAAAGGAAGTTAAGCTCAACATCCAGGACATTCTTTCCCAGACACACG
AAGACCTGGCGTCGATTACCCAGCTCCCTGTGCTGAACTTCACCGCCAAT
ATCAGGAACACTGGAAAGCTGGAATCGGATTACACCGCTATGGTATTCGC
CAATACCTCTGATGCCGGGCCGGCGCCGTATCCCAAGAAGTGGCTGGTCG
GGTGGGATCGGCTTGGGGAGGTGAAGGTCGGGGAGACGAGGGAGTTGAGG
GTCCCCGTTGAGGTGGGGAGCTTTGCGAGGGTGAATGAGGATGGCGATTG
GGTGGTGTTTCCGGGAACGTTTGAGTTGGCGTTGAATTTGGAGAGGAAGG
TTCGGGTGAAGGTTGTTCTTGAGGGTGAGGAGGAAGTCGTGCTGAAGTGG
CCGGGGAAGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002500KYF_002500Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002500-T1.exon1KYF_002500-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002500-T1.cdsKYF_002500-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002500-T1KYF_002500-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
NoteCAZy:GH3
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR036881
DBxrefInterPro:IPR013783
DBxrefInterPro:IPR001764
DBxrefInterPro:IPR036962
DBxrefInterPro:IPR002772
DBxrefInterPro:IPR026891
DBxrefPFAM:PF01915
DBxrefPFAM:PF00933
DBxrefPFAM:PF14310
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3629929..3632343 +
Powered by Drupal