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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3696504..3698775+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002523-T1 ID=KYF_002523-T1|Name=KYF_002523-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2272bp|location=Sequence derived from alignment at ch2:3696504..3698775+ (Aspergillus niger KYF3)
ATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGA
TAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAA
TTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTC
GAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGG
TATCCTAAAGAAAAGGTATAACTACTCTCTGAATACTGTAATCATGCAGG
CGCTTACCGACCTCTTCTACTAGATATACCGACTTCCTTGTCAACGAGAT
CGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAG
CAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCA
GAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGC
GCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGA
CGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCG
CTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACC
TAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGC
ACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGAC
AGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAG
TGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGG
ATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAG
GATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACAC
GAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTC
AGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAAC
CCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGG
CCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTG
AGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCA
AAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGG
TTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTA
CAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGC
GATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGG
CGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAG
CTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAG
CTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCG
TGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGC
GGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCC
GGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGT
GCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCG
CGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGA
GACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGC
CGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCC
AGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTAC
AAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACAT
GCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGC
TCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAG
GACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAA
GGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGG
AGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCC
ACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCC
CGATTTCGGCAAGGGTCGGTAG back to topCoding sequence (CDS) from alignment at ch2:3696504..3698775+ >KYF_002523-T1 ID=KYF_002523-T1|Name=KYF_002523-T1|organism=Aspergillus niger KYF3|type=CDS|length=4428bp|location=Sequence derived from alignment at ch2:3696504..3698775+ (Aspergillus niger KYF3)
ATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGA
TAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAA
TTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTC
GAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGG
TATCCTAAAGAAAAGATATACCGACTTCCTTGTCAACGAGATCGTACCGT
CCGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAG
GAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGA
TCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTG
CAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTT
GAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAA
ACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTC
CCACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCC
ATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGG
GATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGG
GCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTG
GGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTAT
GGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACT
TCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCC
TGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCT
TCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACC
TGGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGAT
ATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAA
GGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCA
ACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACG
GTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCAT
CCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACT
CGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCAC
ATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCG
AAAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGA
ACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATG
TATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCG
CTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGC
ACGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAG
GTTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGC
TTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGG
CAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGC
TACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATT
CATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCA
AGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGC
CCGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGA
GCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGA
CTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTC
GCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGC
TCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCG
GCAAGGGTCGGTAGATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAG
CGGCTCAAGACCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTC
CTCCAACGAGGCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGG
AGGCGAGAGAACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAAT
GAAGGGTTCTACGGTATCCTAAAGAAAAGATATACCGACTTCCTTGTCAA
CGAGATCGTACCGTCCGGCGAAGTCCTGCATCTTCACAACATCCCCACCC
CGGAAGCAGAACAGGAGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAA
CCCGCAGAAAATGATCAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGA
TGCTGCGCCAAGTGCAGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAG
ACATGACGCTCCTTGAATCCCTGTTTGGCGAAGAATCTACCAAGAAGATT
GTATCGCTGAACAAACGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGA
CCTACCTAAGATTCCCACTCTTCTTGTCGATGACCGCGACCTGCGCATCA
AGATGCACCAGGCCATCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAA
ACCGACAGCGAAGGGATGATGGTTATTTCTGCTGCGCCAAACCGGAACAA
CCGTAGTGCGCAGGGCGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCA
ACTGGGATGAGCTGGGTGGTCCCTATCTGCACTTCACTCTGTACAAGGAG
AATAAGGATACTATGGAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGAT
TAACACGAAGAACTTCCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTA
CTGTTCAGAGGGCCTGTGCGCACCGTTTACATGCTGAGCGCCTCACAAAG
ATCAACCCTACGCTTCGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAA
ACATGGCCTTGACCTGGGAGATCTGAATGGCAACGAATTCGTTATCAGTC
TCCGTGAGTGCGATATTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCT
GTTGCAAAGGCAAAGGAGGTCGTGGGCACAGCACTACGGAATCTCCGCGA
GCGCGGTTACTTCAACTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTA
CCCGTACAGACACGGTCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGC
GCCTGCGATGCCATCCTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCA
GGAGGGCGAGAACTCGACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCG
CAGAAGCTATCCACATTTTTGAAACGACCGGAAACGCCAACAAGGCTCTT
GAGAAGCTGCCTCGAAAATTCGCGGCAGAATCCACCGTCATGCGTCAACT
CAGCCGTGCCCAGAACGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTA
ACCTGCGGTTGATGTATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTT
GCCGCCGGTGAGCGCTGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGA
TCTCGTGCTGGTGCACGAGCACAGCGACAAGGATGACACGGCAGCTGCCG
CCGCCGCGGGCGAGGTTGACGCCGATGGCGAAGTCATCATCACCCCGCAG
GCGGGAGACAGCGCTTACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTT
GACTGCCGAGGAGGCAGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTC
TGACCCAGCCCGGCTACGATGTCCTTTACCCGCCCAACAAGATGACGGAC
TTCTACAAACAATTCATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTT
CGACATGCGTCGCAAGTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCA
AGCTGCTCAACCGCCCGGGACCCGACTTCTCCTTCGACGTGCATGTGTAT
ACTCAGGACGATGAGCAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGG
CAAGAAGGCTGAGACTGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACG
CTCAGGAGAAGCTCGCCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAG
TATGCCACCATGGCTCTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTA
CCAGCCCGATTTCGGCAAGGGTCGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0001522 | pseudouridine synthesis |
| GO:0009451 | RNA modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0009982 | pseudouridine synthase activity |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261EY9 |
| DBxref | InterPro:IPR020103 |
| DBxref | InterPro:IPR011760 |
| DBxref | InterPro:IPR042214 |
| DBxref | InterPro:IPR001656 |
| DBxref | PFAM:PF01142 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3696504..3698775 + |
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