|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:4868743..4870409- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002924-T1 ID=KYF_002924-T1|Name=KYF_002924-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1667bp|location=Sequence derived from alignment at ch2:4868743..4870409- (Aspergillus niger KYF3)
ATGGCATCACAAGTGTGGCCAAGTCGGTGGGGCGGAACTAGTTCGTTAGT
AATCTATGCAGAGCAGTATTAGTAAGAGGACATAACTACTAACTAGTTGT
TCACTAATTCTACCGTGGCTTGGCCCACTGATCAGGATTCTTGAGTTGAG
CATCAGCCTTGGCAATAAATCCTTAGTCGGAAGAAGGCTTTCATCAACTA
CCACATCATCGGCGCCTCCTCCAATGTCCGCGCCTCGACGTGCGAGCATC
TGCAGATAAAGGTATGTATATATAAATCCCCCATATAGCTTGATCTTCCT
CCCTTCATTCTTGCCCAATCCTACAGGTTATTAATCAGAAAGAAGACTGT
CCCAAGTGCCGAACCCGTCGCATCAAATGCGACAGGTCGGTCCCAGTATG
CCGGAAATGCACCACACGAGGTTTCTCATGTCCAGGATACGGCCTTATTC
TCCGATGGAACCAAGGAGTTGCCAGCAGAGGTAGACTGGCAGGCCGGCAG
CTACCTATACCATCCACCCCGACTATTGACCACTACCCGGATGCGGTGAC
ATCCGAACTCATGCATCACTACCATCGGATCGTCTCTGCCAAGCTGGCCT
GGGTGGATGGTCCGACGAACCCCTGGAGACAGGTTATCGTCCCACTGGCT
GGGGCATCGTCGACGGTCCTCCATGCGGTGCTCGCACTTTCGTCGGAAGA
CCTTGCGGTACGATTCCCGATCGGGCATCCGCGCCGCCAGCAGCTGCAGC
TCGTCTCAATGTGCCGCCGGAATCAGGCCTTATCGTCGGTTGCTCGTCTG
CTGTGCCACATGAGGCAGGAGGGCTCCTCCACCAGCCAGGCCCAATGTGC
GCTGGCCGCCACGCTCATCCTATATAACGTCGAGCTCCTCGGCGCCGCGT
CGGCTAAGTGGCGAATGCACCTGGAGGCCGCGCGTGTGATCCGTCAATGG
AAAGATCATACACTTACGGACGCCGGACGCGAGGATGAGATCGATGCTTT
TTTGATCTACGAGCAGTACTACGCAAGTGTCTTTGCTGGCCTCACAACAT
TCGATGCCCTGGAGGAGTACGAAGCCGTTCCACTAACTGATGCAAATGCC
ATTTTTGGCGATTTCATCATCATTATCAGTCGTGCGACACATGTGGAACG
CTTGCAATATAGTCATGGCCATCCGATCGATTCTTCATTGCTTCGCACTA
TGACAGGGGACTTGGAAGCCGCCAAGGCCCGCATGCTTCAGCTTAGTCTC
ATACTTCGCTGGCAAACAGACCAGGCGTGTAGCAGTTTCCAGCACCTGGT
GTGGATTTTTTATTACGCTAGCCTAATCTATGTCTACCACGTCCTCGCCC
GGGATGGTTCTTTAGACACGACACGCCAGTCCTGGAGAGATTCCATCTTT
GCTCATCTAGCCCTTCTCGTTGACAAGCGCTCATTCGCTCATGACCTTGT
TTGGCCGCTATTCATTGCAGGCACCGAGTGCCGCGGGTGTCCGCAGAAGC
AGGAGGTGGTAGCGCACGAGATCGAACTGGTGATGGAGATAAGCGGCACA
TTGGACCGACGCAACGTCTTGGCGTTTCTGCAGCGGTTCTGGTCTCTGCC
GGACAGTGGCCTTACGTGGATCCAATACATGAGACTGGCACCCGAACGGC
GGATGCTTATCCTTTAA back to topCoding sequence (CDS) from alignment at ch2:4868743..4870409- >KYF_002924-T1 ID=KYF_002924-T1|Name=KYF_002924-T1|organism=Aspergillus niger KYF3|type=CDS|length=4410bp|location=Sequence derived from alignment at ch2:4868743..4870409- (Aspergillus niger KYF3)
GTTATTAATCAGAAAGAAGACTGTCCCAAGTGCCGAACCCGTCGCATCAA
ATGCGACAGGTCGGTCCCAGTATGCCGGAAATGCACCACACGAGGTTTCT
CATGTCCAGGATACGGCCTTATTCTCCGATGGAACCAAGGAGTTGCCAGC
AGAGGTAGACTGGCAGGCCGGCAGCTACCTATACCATCCACCCCGACTAT
TGACCACTACCCGGATGCGGTGACATCCGAACTCATGCATCACTACCATC
GGATCGTCTCTGCCAAGCTGGCCTGGGTGGATGGTCCGACGAACCCCTGG
AGACAGGTTATCGTCCCACTGGCTGGGGCATCGTCGACGGTCCTCCATGC
GGTGCTCGCACTTTCGTCGGAAGACCTTGCGGTACGATTCCCGATCGGGC
ATCCGCGCCGCCAGCAGCTGCAGCTCGTCTCAATGTGCCGCCGGAATCAG
GCCTTATCGTCGGTTGCTCGTCTGCTGTGCCACATGAGGCAGGAGGGCTC
CTCCACCAGCCAGGCCCAATGTGCGCTGGCCGCCACGCTCATCCTATATA
ACGTCGAGCTCCTCGGCGCCGCGTCGGCTAAGTGGCGAATGCACCTGGAG
GCCGCGCGTGTGATCCGTCAATGGAAAGATCATACACTTACGGACGCCGG
ACGCGAGGATGAGATCGATGCTTTTTTGATCTACGAGCAGTACTACGCAA
GTGTCTTTGCTGGCCTCACAACATTCGATGCCCTGGAGGAGTACGAAGCC
GTTCCACTAACTGATGCAAATGCCATTTTTGGCGATTTCATCATCATTAT
CAGTCGTGCGACACATGTGGAACGCTTGCAATATAGTCATGGCCATCCGA
TCGATTCTTCATTGCTTCGCACTATGACAGGGGACTTGGAAGCCGCCAAG
GCCCGCATGCTTCAGCTTAGTCTCATACTTCGCTGGCAAACAGACCAGGC
GTGTAGCAGTTTCCAGCACCTGGTGTGGATTTTTTATTACGCTAGCCTAA
TCTATGTCTACCACGTCCTCGCCCGGGATGGTTCTTTAGACACGACACGC
CAGTCCTGGAGAGATTCCATCTTTGCTCATCTAGCCCTTCTCGTTGACAA
GCGCTCATTCGCTCATGACCTTGTTTGGCCGCTATTCATTGCAGGCACCG
AGTGCCGCGGGTGTCCGCAGAAGCAGGAGGTGGTAGCGCACGAGATCGAA
CTGGTGATGGAGATAAGCGGCACATTGGACCGACGCAACGTCTTGGCGTT
TCTGCAGCGGTTCTGGTCTCTGCCGGACAGTGGCCTTACGTGGATCCAAT
ACATGAGACTGGCACCCGAACGGCGGATGCTTATCCTTTAATCGGAAGAA
GGCTTTCATCAACTACCACATCATCGGCGCCTCCTCCAATGTCCGCGCCT
CGACGTGCGAGCATCTGCAGATAAAGATGGCATCACAAGTGTGGCCAAGT
CGGTGGGGCGGAACTAGTTCGTTATTAATCAGAAAGAAGACTGTCCCAAG
TGCCGAACCCGTCGCATCAAATGCGACAGGTCGGTCCCAGTATGCCGGAA
ATGCACCACACGAGGTTTCTCATGTCCAGGATACGGCCTTATTCTCCGAT
GGAACCAAGGAGTTGCCAGCAGAGGTAGACTGGCAGGCCGGCAGCTACCT
ATACCATCCACCCCGACTATTGACCACTACCCGGATGCGGTGACATCCGA
ACTCATGCATCACTACCATCGGATCGTCTCTGCCAAGCTGGCCTGGGTGG
ATGGTCCGACGAACCCCTGGAGACAGGTTATCGTCCCACTGGCTGGGGCA
TCGTCGACGGTCCTCCATGCGGTGCTCGCACTTTCGTCGGAAGACCTTGC
GGTACGATTCCCGATCGGGCATCCGCGCCGCCAGCAGCTGCAGCTCGTCT
CAATGTGCCGCCGGAATCAGGCCTTATCGTCGGTTGCTCGTCTGCTGTGC
CACATGAGGCAGGAGGGCTCCTCCACCAGCCAGGCCCAATGTGCGCTGGC
CGCCACGCTCATCCTATATAACGTCGAGCTCCTCGGCGCCGCGTCGGCTA
AGTGGCGAATGCACCTGGAGGCCGCGCGTGTGATCCGTCAATGGAAAGAT
CATACACTTACGGACGCCGGACGCGAGGATGAGATCGATGCTTTTTTGAT
CTACGAGCAGTACTACGCAAGTGTCTTTGCTGGCCTCACAACATTCGATG
CCCTGGAGGAGTACGAAGCCGTTCCACTAACTGATGCAAATGCCATTTTT
GGCGATTTCATCATCATTATCAGTCGTGCGACACATGTGGAACGCTTGCA
ATATAGTCATGGCCATCCGATCGATTCTTCATTGCTTCGCACTATGACAG
GGGACTTGGAAGCCGCCAAGGCCCGCATGCTTCAGCTTAGTCTCATACTT
CGCTGGCAAACAGACCAGGCGTGTAGCAGTTTCCAGCACCTGGTGTGGAT
TTTTTATTACGCTAGCCTAATCTATGTCTACCACGTCCTCGCCCGGGATG
GTTCTTTAGACACGACACGCCAGTCCTGGAGAGATTCCATCTTTGCTCAT
CTAGCCCTTCTCGTTGACAAGCGCTCATTCGCTCATGACCTTGTTTGGCC
GCTATTCATTGCAGGCACCGAGTGCCGCGGGTGTCCGCAGAAGCAGGAGG
TGGTAGCGCACGAGATCGAACTGGTGATGGAGATAAGCGGCACATTGGAC
CGACGCAACGTCTTGGCGTTTCTGCAGCGGTTCTGGTCTCTGCCGGACAG
TGGCCTTACGTGGATCCAATACATGAGACTGGCACCCGAACGGCGGATGC
TTATCCTTTAATCGGAAGAAGGCTTTCATCAACTACCACATCATCGGCGC
CTCCTCCAATGTCCGCGCCTCGACGTGCGAGCATCTGCAGATAAAGATGG
CATCACAAGTGTGGCCAAGTCGGTGGGGCGGAACTAGTTCGTTATTAATC
AGAAAGAAGACTGTCCCAAGTGCCGAACCCGTCGCATCAAATGCGACAGG
TCGGTCCCAGTATGCCGGAAATGCACCACACGAGGTTTCTCATGTCCAGG
ATACGGCCTTATTCTCCGATGGAACCAAGGAGTTGCCAGCAGAGGTAGAC
TGGCAGGCCGGCAGCTACCTATACCATCCACCCCGACTATTGACCACTAC
CCGGATGCGGTGACATCCGAACTCATGCATCACTACCATCGGATCGTCTC
TGCCAAGCTGGCCTGGGTGGATGGTCCGACGAACCCCTGGAGACAGGTTA
TCGTCCCACTGGCTGGGGCATCGTCGACGGTCCTCCATGCGGTGCTCGCA
CTTTCGTCGGAAGACCTTGCGGTACGATTCCCGATCGGGCATCCGCGCCG
CCAGCAGCTGCAGCTCGTCTCAATGTGCCGCCGGAATCAGGCCTTATCGT
CGGTTGCTCGTCTGCTGTGCCACATGAGGCAGGAGGGCTCCTCCACCAGC
CAGGCCCAATGTGCGCTGGCCGCCACGCTCATCCTATATAACGTCGAGCT
CCTCGGCGCCGCGTCGGCTAAGTGGCGAATGCACCTGGAGGCCGCGCGTG
TGATCCGTCAATGGAAAGATCATACACTTACGGACGCCGGACGCGAGGAT
GAGATCGATGCTTTTTTGATCTACGAGCAGTACTACGCAAGTGTCTTTGC
TGGCCTCACAACATTCGATGCCCTGGAGGAGTACGAAGCCGTTCCACTAA
CTGATGCAAATGCCATTTTTGGCGATTTCATCATCATTATCAGTCGTGCG
ACACATGTGGAACGCTTGCAATATAGTCATGGCCATCCGATCGATTCTTC
ATTGCTTCGCACTATGACAGGGGACTTGGAAGCCGCCAAGGCCCGCATGC
TTCAGCTTAGTCTCATACTTCGCTGGCAAACAGACCAGGCGTGTAGCAGT
TTCCAGCACCTGGTGTGGATTTTTTATTACGCTAGCCTAATCTATGTCTA
CCACGTCCTCGCCCGGGATGGTTCTTTAGACACGACACGCCAGTCCTGGA
GAGATTCCATCTTTGCTCATCTAGCCCTTCTCGTTGACAAGCGCTCATTC
GCTCATGACCTTGTTTGGCCGCTATTCATTGCAGGCACCGAGTGCCGCGG
GTGTCCGCAGAAGCAGGAGGTGGTAGCGCACGAGATCGAACTGGTGATGG
AGATAAGCGGCACATTGGACCGACGCAACGTCTTGGCGTTTCTGCAGCGG
TTCTGGTCTCTGCCGGACAGTGGCCTTACGTGGATCCAATACATGAGACT
GGCACCCGAACGGCGGATGCTTATCCTTTAATCGGAAGAAGGCTTTCATC
AACTACCACATCATCGGCGCCTCCTCCAATGTCCGCGCCTCGACGTGCGA
GCATCTGCAGATAAAGATGGCATCACAAGTGTGGCCAAGTCGGTGGGGCG
GAACTAGTTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:4868743..4870409 - |
|
