|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:83918..85847- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_002963-T1 ID=KYF_002963-T1|Name=KYF_002963-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1930bp|location=Sequence derived from alignment at ch3:83918..85847- (Aspergillus niger KYF3)
ATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAA
GATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCT
CGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGACGAAAGAAACGG
CCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGT
GCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGC
ATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAA
TTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGT
TAATCTAGCAACCCAGGTTGGTAGGCTTTACAAGCATAACACTTCCGATA
CTGACACAGGGCTCCTTGGCGAGCCGTGACAGACGAACGAAGATAGCGAA
CACTTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGA
AGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTG
TGTTTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGC
AGCGCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCC
GCTGGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTG
CAGGTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTTT
GCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTGA
AACATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGGTTTGCCAC
ACAGCAAGCATTGGCGCGTGCCAATTTCCTCCAGTCGCAGAGCCTGGCCG
TGCTTCAGGCAACGACCCTCTTCTTAACTTGTTTGCGTGGGGCAGATGAT
GCCGCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGGG
ACTCGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAAA
CCGAGGTACGGCGGCGGCTCTGGTGGACCATATACTTGTTAGACTGCCAG
TCTTCCGAGTTTCGTGCTTATCGGTCGGTATGCAAATAAAAGAAGGCACC
TACAACACCAAGTTACCCCTGAATATCCACGACTCGGATATATCCCCACA
GTCTAGTGCGGTTCCTGATGAAAGGTCTTGTTTCACTGATATGTAATTTT
GTTTGATACGGTGTGAAATGACGGTGCTTCATCGAAAGCTTCATTCAGAT
CTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGT
GAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGT
ACCTGGGGCTCTGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACC
GTCATCCGCCTGGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGA
AGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGG
AAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAA
TTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCT
CTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGA
TTGGCATTGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTA
GTCAAAGTCGTCACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGT
GATCTCAATCTTAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGG
GATGCATCTGGGACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCT
GAAAACCTATCCTATAGCAAGAATCAATAA back to topCoding sequence (CDS) from alignment at ch3:83918..85847- >KYF_002963-T1 ID=KYF_002963-T1|Name=KYF_002963-T1|organism=Aspergillus niger KYF3|type=CDS|length=6108bp|location=Sequence derived from alignment at ch3:83918..85847- (Aspergillus niger KYF3)
CTTCATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTC
ACTGAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGAT
TGCAGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATTCCATTGCAGTGG
GTGACAGCCACCGTCATCCGCCTGGCTCTTGCTCGATCATGGTTGATTGC
CCACCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCAC
GCTCAGACGTGGAAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGCCATT
GAAATATTGGAATTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAA
GTGGTCATGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTC
TCCTTGAGCAGATTGGCATTGGACCACAGACAATGCTGACTGACCGGGCC
TGGGCTGTAGTAGTCAAAGTCGTCACACGTTGGAGAAACACCGACTATCA
AAAGGACGGGGTGATCTCAATCTTAGTCTCCCGGCTTATGGCGCAAGCTG
CAGTCGCACAGGGATGCATCTGGGACGGGAGAGAGAGAGAAGACGGGCCA
GGATCACCGCCTGAAAACCTATCCTATAGCAAGAATCAATAAATGATGCC
GCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGGGACT
CGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAAACCG
AGACGAACGAAGATAGCGAACACTTTAAGCATCGTCTCGAGAAGGGGGAG
GATGAATCTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTGAATT
GGCGACCGGGAATCAATTTGTGTTTCAGTATTCGTCGATGGCAGTTTCCC
TGTCCGACTTCTACCCCAGCAGCGCCCATCACCGTATCTTATGGAACTTA
TTCGAGGAGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGTGGCT
TACTAGCATCTTGAACAGTGCAGGTGCAACGGCTATCGTGGATGACAAGG
CTTTCGAGGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAGCATG
AGCCCAGAGCAGTGTACTGAAACATCCAGCCAGGGCAGTCATCCCTGCAG
CGATACTACCGATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGT
AGCCAGAAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCAT
CAAGTCGGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAACGAC
GAAAGAAACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTG
GAGAAGGAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAG
GTCGAAACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCG
AGCATGGGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAACCAC
CAGGTTCTTGTTAATCTAGCAACCCAGCTTCATTCAGATCTGCGTTGTAG
CAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGTGAAAAGGCTCC
ATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGTACCTGGGGCTC
TGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACCGTCATCCGCCT
GGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGAAGGCATGTCCG
CGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGGAAGACCTCAAG
CGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAATTTGCGTATTT
GCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCTCTTCCAGGGAT
ACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGATTGGCATTGGA
CCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTAGTCAAAGTCGT
CACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGTGATCTCAATCT
TAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGGGATGCATCTGG
GACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCTGAAAACCTATC
CTATAGCAAGAATCAATAAATGATGCCGCCTTCGTCCGGGCTACGACAGC
GGCTATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGTACCT
ACCCCGGACTGAGCCCTTTCGAAACCGAGACGAACGAAGATAGCGAACAC
TTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGAAGT
GGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTGTGT
TTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGCAGC
GCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCCGCT
GGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTGCAG
GTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTTTGCC
GTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTGAAAC
ATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGATGGACAGCGCT
TCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAAGATACGATGTGA
CAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGCATCT
TCCCAGGTCCCGGCCGAGCCCAACGACGAAAGAAACGGCCACTGAAGGCT
CAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGTGCAGGTTTTGAC
TCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGCATCCCCTGACGA
CAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAATTGTTAGTGGAC
AGAGAATCCATCCACTATATCAACCACCAGGTTCTTGTTAATCTAGCAAC
CCAGCTTCATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCG
GCTCACTGAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAAT
CGATTGCAGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATTCCATTGCA
GTGGGTGACAGCCACCGTCATCCGCCTGGCTCTTGCTCGATCATGGTTGA
TTGCCCACCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATG
GCACGCTCAGACGTGGAAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGC
CATTGAAATATTGGAATTTGCGTATTTGCTCGAGACCGACCCTCGCACCA
AGAAGTGGTCATGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATC
TTTCTCCTTGAGCAGATTGGCATTGGACCACAGACAATGCTGACTGACCG
GGCCTGGGCTGTAGTAGTCAAAGTCGTCACACGTTGGAGAAACACCGACT
ATCAAAAGGACGGGGTGATCTCAATCTTAGTCTCCCGGCTTATGGCGCAA
GCTGCAGTCGCACAGGGATGCATCTGGGACGGGAGAGAGAGAGAAGACGG
GCCAGGATCACCGCCTGAAAACCTATCCTATAGCAAGAATCAATAAATGA
TGCCGCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGG
GACTCGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAA
ACCGAGACGAACGAAGATAGCGAACACTTTAAGCATCGTCTCGAGAAGGG
GGAGGATGAATCTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTG
AATTGGCGACCGGGAATCAATTTGTGTTTCAGTATTCGTCGATGGCAGTT
TCCCTGTCCGACTTCTACCCCAGCAGCGCCCATCACCGTATCTTATGGAA
CTTATTCGAGGAGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGT
GGCTTACTAGCATCTTGAACAGTGCAGGTGCAACGGCTATCGTGGATGAC
AAGGCTTTCGAGGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAG
CATGAGCCCAGAGCAGTGTACTGAAACATCCAGCCAGGGCAGTCATCCCT
GCAGCGATACTACCGATGGACAGCGCTTCAACTACACGTAGTTGCCGGCG
TTGTAGCCAGAAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTT
GCATCAAGTCGGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCAA
CGACGAAAGAAACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAG
CCTGGAGAAGGAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATC
AGAGGTCGAAACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAA
GGCGAGCATGGGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAA
CCACCAGGTTCTTGTTAATCTAGCAACCCAGCTTCATTCAGATCTGCGTT
GTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGTGAAAAGG
CTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGTACCTGGG
GCTCTGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACCGTCATCC
GCCTGGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGAAGGCATG
TCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGGAAGACCT
CAAGCGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAATTTGCGT
ATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCTCTTCCAG
GGATACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGATTGGCAT
TGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTAGTCAAAG
TCGTCACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGTGATCTCA
ATCTTAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGGGATGCAT
CTGGGACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCTGAAAACC
TATCCTATAGCAAGAATCAATAAATGATGCCGCCTTCGTCCGGGCTACGA
CAGCGGCTATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGT
ACCTACCCCGGACTGAGCCCTTTCGAAACCGAGACGAACGAAGATAGCGA
ACACTTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAG
AAGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTT
GTGTTTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAG
CAGCGCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCC
CGCTGGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGT
GCAGGTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTT
TGCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTG
AAACATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGATGGACAG
CGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAAGATACGAT
GTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGC
ATCTTCCCAGGTCCCGGCCGAGCCCAACGACGAAAGAAACGGCCACTGAA
GGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGTGCAGGTTT
TGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGCATCCCCTG
ACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAATTGTTAGT
GGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGTTAATCTAG
CAACCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.2 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:83918..85847 - |
|
