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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:448527..449689+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003097-T1 ID=KYF_003097-T1|Name=KYF_003097-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1163bp|location=Sequence derived from alignment at ch3:448527..449689+ (Aspergillus niger KYF3)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGGT
ACCCCACCCATCCCATACCCACCACCACCACCGCCAGACCCAACATAACT
AACTTCCACCACCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAA
ACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGAGTAAACACCCCC
CAAGAATCCCCACCACCCACCACACTCCGTGGTTAACATAAGAGACAAAA
ACCAGGTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCA
CCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGAC
ACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGC
CCCCACCACCCAACCCTTCCCCATCCCCGTAAGCACCCTCCTCCCCACCC
TCTCCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTC
AAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAG
CCTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCC
GCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAG
GCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCT
CTCCGTGCTGGGTTGGCATACCGAGGAGAGCTCCAAGTGGTCGAGTAATC
GGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTT
TTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGA
TGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCC
CGATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTAT
GTGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTA
TGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTC
CTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGA
CGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGA
TTGGGAGGGTTAA back to topCoding sequence (CDS) from alignment at ch3:448527..449689+ >KYF_003097-T1 ID=KYF_003097-T1|Name=KYF_003097-T1|organism=Aspergillus niger KYF3|type=CDS|length=3087bp|location=Sequence derived from alignment at ch3:448527..449689+ (Aspergillus niger KYF3)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGAA
ACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAAACCCGACAATTTCACTG
ACACGAGCTTCAAATCCAAGAGTATAACCCTAACCCAACAATCCCTAACC
CTGCACGCCCCCAGCACCACCCACCAATTCACCCACCACGTCTCCCTCCT
CAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCGCGCATCTAACCA
CCCATCTCACCTCCGCCCCCACCACCCAACCCTTCCCCATCCCCGTAAGC
ACCCTCCTCCCCACCCTCTCCCCCCTAATCCTCGACGCCAGCACAACCGT
GCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGG
AAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCGGCATGACCCAC
CTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGT
CGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGA
CCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACCGAGGAGAGCTCC
AAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAA
GCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGA
TTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGG
ACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCATATGGTGCCTAA
GTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGCGCCGAGGGATG
AGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAG
GGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGA
TGGCGGGGAGGTTGGACGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGG
AGGCTAGGGGGGTGGATTGGGAGGGTTAAATGGGCTCCAGCTCCAAAAAG
AAGAAGGAGAAGCAGAAGGACTTCCAGAAACCCAAGCTCAAAGTCGGCAA
AGCCAAAGCCAAACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGA
GTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCACCACC
CACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGACACCCA
GCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGCCCCCA
CCACCCAACCCTTCCCCATCCCCGTAAGCACCCTCCTCCCCACCCTCTCC
CCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTCAAGCT
CCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAGCCTAA
TGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCCGCGTC
ACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAGGCCGT
GGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCTCTCCG
TGCTGGGTTGGCATACCGAGGAGAGCTCCAAGTGGTCGAGTAATCGGGCA
GCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTTTTGGG
GGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGATGAGA
TGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCCCGATT
GTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTATGTGTA
TTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTATGAGA
CCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTCCTGTT
GAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGACGGGC
GTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGATTGGG
AGGGTTAAATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGAC
TTCCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAAACCCGACAA
TTTCACTGACACGAGCTTCAAATCCAAGAGTATAACCCTAACCCAACAAT
CCCTAACCCTGCACGCCCCCAGCACCACCCACCAATTCACCCACCACGTC
TCCCTCCTCAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCGCGCA
TCTAACCACCCATCTCACCTCCGCCCCCACCACCCAACCCTTCCCCATCC
CCGTAAGCACCCTCCTCCCCACCCTCTCCCCCCTAATCCTCGACGCCAGC
ACAACCGTGCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGC
CGACGTGGAAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCGGCA
TGACCCACCTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTCTCG
TGGCTGGTCGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTG
GATCAAGACCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACCGAGG
AGAGCTCCAAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCG
AAGGGGAAGCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGA
GGCTGGGATTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTGGTG
GGAGTGGGACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCATATG
GTGCCTAAGTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGCGCC
GAGGGATGAGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCCGTG
TGTTTAAGGGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCG
AGGCAGGATGGCGGGGAGGTTGGACGGGCGTCGTCGGCTGTGAGTAAGGT
GTTGAAGGAGGCTAGGGGGGTGGATTGGGAGGGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR024679 |
| DBxref | PFAM:PF12333 |
| Product | rRNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:448527..449689 + |
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