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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:590081..590885- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003133-T1 ID=KYF_003133-T1|Name=KYF_003133-T1|organism=Aspergillus niger KYF3|type=mRNA|length=805bp|location=Sequence derived from alignment at ch3:590081..590885- (Aspergillus niger KYF3)
ATGGTGATTATCAACCTTGTCCAGGGGATCGGTTTACAATCCAAGCTAAC
AGAACCAGTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCA
TTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAG
ACAGTACGTTGGGCCGGTTCCCATCCCCTCACCCTTTTGGGTCGGACCAG
GCTAATTATGTATCTGGATAGCAATGTCCCCGAAATTGAAGCCGCAACTT
CTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAG
AGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAAT
CAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGT
TCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTG
AAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGAT
GCTGAAACACAAATTGGTGGACTTCATCATTCAATTGTATGTTTCATCTG
CCTTGTCCATATGTCATTCGATCAATGAGAGGCTAACGATTTCTTCGTCT
AATAGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCGT
ATGTGTCCATGTCCATCTGATTGATGGAGGCTTCTAACCCACATTTGCTG
TAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGGT
AAGTCGCCCTGGCTACTTCAGCTGAACCTGGCTGATAAAATTACAGTTTG
ATTAG back to topCoding sequence (CDS) from alignment at ch3:590081..590885- >KYF_003133-T1 ID=KYF_003133-T1|Name=KYF_003133-T1|organism=Aspergillus niger KYF3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch3:590081..590885- (Aspergillus niger KYF3)
TTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGAC
ACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAA
TGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCC
TTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTG
AACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACA
TATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCT
TCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTC
ATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTT
CATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATC
TTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCG
AAAGACAATGTTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGT
CGTTCTTGACACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAA
GCTCTTCCAATGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTT
CTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGA
GCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATG
AGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGC
GCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACAT
TTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTGAAACACAAAT
TGGTGGACTTCATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGG
CTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCT
CAAACCTCCGAAAGACAATGTTTGATTAGTTGAATGCTCGTGCTCGTTTC
GTTGCTGAGTCGTTCTTGACACCGTATGGAGGAAGTGGATAAGGAAATCT
CGGAAATGAAGCTCTTCCAATGTCCCCGAAATTGAAGCCGCAACTTCTCC
GGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAGAACGAGAGGG
TCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCATCCGAATCAAG
CAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCACTAGGTTCCT
GACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAGCCAGTGAAGG
GATATGACATTTCATTCCTCATTACGAACTTCCATACTGAACAGATGCTG
AAACACAAATTGGTGGACTTCATCATTCAATTTCTCAATCATTGCGTCCG
TACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCGCGATATCGAA
CTTCGCTTCTCAAACCTCCGAAAGACAATGTTTGATTAGTTGAATGCTCG
TGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTATGGAGGAAGTGGAT
AAGGAAATCTCGGAAATGAAGCTCTTCCAATGTCCCCGAAATTGAAGCCG
CAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTCCCGGAATGAG
AACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCCGTGTCAGCAT
CCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTCCACAAGTTCA
CTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCTACGGAGAAAG
CCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACTTCCATACTGA
ACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAATTTCTCAATC
ATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACGGCAGCACTCG
CGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACAATGTTTGATTAGT
TGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGACACCGTATGGA
GGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAATGTCCCCGAA
ATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCCTTACAATCTC
CCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTGAACAGTGTCC
GTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACATATCTTGGTC
CACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCTTCTTCATTCT
ACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTCATTACGAACT
TCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTTCATCATTCAA
TTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATCTTCATTGACG
GCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCGAAAGACAATG
TTTGATTAGTTGAATGCTCGTGCTCGTTTCGTTGCTGAGTCGTTCTTGAC
ACCGTATGGAGGAAGTGGATAAGGAAATCTCGGAAATGAAGCTCTTCCAA
TGTCCCCGAAATTGAAGCCGCAACTTCTCCGGAACTACTTCTCAACCCCC
TTACAATCTCCCGGAATGAGAACGAGAGGGTCCTTATCGAGCCCAGCGTG
AACAGTGTCCGTGTCAGCATCCGAATCAAGCAGGCAGATGAGATCGAACA
TATCTTGGTCCACAAGTTCACTAGGTTCCTGACGCAGCGCGCGGAATCCT
TCTTCATTCTACGGAGAAAGCCAGTGAAGGGATATGACATTTCATTCCTC
ATTACGAACTTCCATACTGAACAGATGCTGAAACACAAATTGGTGGACTT
CATCATTCAATTTCTCAATCATTGCGTCCGTACCTTTTGGCTGTTAGATC
TTCATTGACGGCAGCACTCGCGATATCGAACTTCGCTTCTCAAACCTCCG
AAAGACAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015629 | actin cytoskeleton |
| GO:0005885 | Arp2/3 protein complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030833 | regulation of actin filament polymerization |
| GO:0034314 | Arp2/3 complex-mediated actin nucleation |
| GO:0030041 | actin filament polymerization |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265CCT |
| DBxref | InterPro:IPR034666 |
| DBxref | InterPro:IPR008384 |
| DBxref | PFAM:PF05856 |
| Product | Actin- protein 2/3 complex subunit 4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:590081..590885 - |
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