You are here

Home

KYF_003173-T1, KYF_003173-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003173-T1
Unique NameKYF_003173-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:712458..713316+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003173-T1 ID=KYF_003173-T1|Name=KYF_003173-T1|organism=Aspergillus niger KYF3|type=mRNA|length=859bp|location=Sequence derived from alignment at ch3:712458..713316+ (Aspergillus niger KYF3)
ATGCGATTCCTTTGTCTCCACGGCGCAGGTACCAACGCAGAAGTAAGCAA
GCATCTCCCCTGCTGGCGGGCTCTCTGGCTTATCTCCGCTTCCCCGCCAT
CCAAATCTAACCGTTGAACAAACATTAGATCTTCGAGATCCAATCCGGTA
ATTGAACAACAGTCCAATCCGCCAGGCCAAGATTGTCAATCTGACTTGTA
CCGCAACCAGGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTT
CAAATACTACAATGGCTGCATGGAAGCTGAAGTTGAGCCTCGTACATCAC
CCCCACCCTCCACACCAGAAGATTCGGAGACATGTGATGGCTAACATATT
GAATAGAGCTAAAGGGCCTCTTTACTGGCCCTTTCTATAACCACTATCCG
CGCGACCGGGCACCGGGCGAATATCTCGCCCCCGCCATGAAGCACGTCTA
CGATATCATCGAGCGTGATGGACCCTTTGACGCCGTTATGGGATTCTCGC
AAGGTGCTGCCCTGGCATGCGCCATGATCGCACATCATGCAAAGATGCAT
CAGGAGCCTCTGTTCAAGGTCGCCGTATTTATCTGCGGTGCCGTACCGTT
CGATAGCACTGGCAACGAGATCATTCCTGAGCCTTCAGCTGGGGACGAGT
ATCCGGTCAATATCCCCACGGCAAACATTGTGGGAAAGCAGGATGAGCTA
TATCCGTCTAGTATGCGTTTGTCCAGGCTGTGTGATCCGAGCAAGATGAG
TTTCCATGATCACGGGTCGAAGCATATGGTGCCGTTTGATGTGAAGAACA
CCGAGGCCATGGTCGCTGTTATTGAGGCTGCGGTCCAGAAGGCTTTGAGG
GGAGAATAG
back to top

Coding sequence (CDS) from alignment at ch3:712458..713316+

>KYF_003173-T1 ID=KYF_003173-T1|Name=KYF_003173-T1|organism=Aspergillus niger KYF3|type=CDS|length=2580bp|location=Sequence derived from alignment at ch3:712458..713316+ (Aspergillus niger KYF3)
ATGCGATTCCTTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGA
GATCCAATCCGGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGT
TCAAATACTACAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAG
GGCCTCTTTACTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACC
GGGCGAATATCTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGC
GTGATGGACCCTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTG
GCATGCGCCATGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTT
CAAGGTCGCCGTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCA
ACGAGATCATTCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATC
CCCACGGCAAACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTAT
GCGTTTGTCCAGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACG
GGTCGAAGCATATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTC
GCTGTTATTGAGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCG
ATTCCTTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCC
AATCCGGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAA
TACTACAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCT
CTTTACTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCG
AATATCTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGAT
GGACCCTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATG
CGCCATGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGG
TCGCCGTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAG
ATCATTCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCAC
GGCAAACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTT
TGTCCAGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCG
AAGCATATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGT
TATTGAGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCGATTCC
TTTGTCTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCCAATCC
GGTGGAATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAATACTA
CAATGGCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCTCTTTA
CTGGCCCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCGAATAT
CTCGCCCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGATGGACC
CTTTGACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATGCGCCA
TGATCGCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGGTCGCC
GTATTTATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAGATCAT
TCCTGAGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCACGGCAA
ACATTGTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTTTGTCC
AGGCTGTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCGAAGCA
TATGGTGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGTTATTG
AGGCTGCGGTCCAGAAGGCTTTGAGGGGAGAATAGATGCGATTCCTTTGT
CTCCACGGCGCAGGTACCAACGCAGAAATCTTCGAGATCCAATCCGGTGG
AATTACATACGACCTCGCAAAGTATGGCCATACGTTCAAATACTACAATG
GCTGCATGGAAGCTGAAGTTGAGCCTCAGCTAAAGGGCCTCTTTACTGGC
CCTTTCTATAACCACTATCCGCGCGACCGGGCACCGGGCGAATATCTCGC
CCCCGCCATGAAGCACGTCTACGATATCATCGAGCGTGATGGACCCTTTG
ACGCCGTTATGGGATTCTCGCAAGGTGCTGCCCTGGCATGCGCCATGATC
GCACATCATGCAAAGATGCATCAGGAGCCTCTGTTCAAGGTCGCCGTATT
TATCTGCGGTGCCGTACCGTTCGATAGCACTGGCAACGAGATCATTCCTG
AGCCTTCAGCTGGGGACGAGTATCCGGTCAATATCCCCACGGCAAACATT
GTGGGAAAGCAGGATGAGCTATATCCGTCTAGTATGCGTTTGTCCAGGCT
GTGTGATCCGAGCAAGATGAGTTTCCATGATCACGGGTCGAAGCATATGG
TGCCGTTTGATGTGAAGAACACCGAGGCCATGGTCGCTGTTATTGAGGCT
GCGGTCCAGAAGGCTTTGAGGGGAGAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003173KYF_003173Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003173-T1.exon1KYF_003173-T1.exon1Aspergillus niger KYF3exon
KYF_003173-T1.exon2KYF_003173-T1.exon2Aspergillus niger KYF3exon
KYF_003173-T1.exon3KYF_003173-T1.exon3Aspergillus niger KYF3exon
KYF_003173-T1.exon4KYF_003173-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003173-T1.cdsKYF_003173-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003173-T1KYF_003173-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR005645
DBxrefInterPro:IPR029058
DBxrefPFAM:PF03959
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:712458..713316 +
Powered by Drupal