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KYF_003190-T1, KYF_003190-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003190-T1
Unique NameKYF_003190-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:762262..762889-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003190-T1 ID=KYF_003190-T1|Name=KYF_003190-T1|organism=Aspergillus niger KYF3|type=mRNA|length=628bp|location=Sequence derived from alignment at ch3:762262..762889- (Aspergillus niger KYF3)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA
CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTC
ATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTTT
TTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT
ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA
CTCGGAAAAACATCCCGGAATGCGCTAA
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Coding sequence (CDS) from alignment at ch3:762262..762889-

>KYF_003190-T1 ID=KYF_003190-T1|Name=KYF_003190-T1|organism=Aspergillus niger KYF3|type=CDS|length=816bp|location=Sequence derived from alignment at ch3:762262..762889- (Aspergillus niger KYF3)
AAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTTAAAGTTTC
AGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGACAATTTGG
CAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGAGGAAGCAA
ATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTTTGTATCAT
TATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAGCGCTATCC
TCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAATGCGCTAA
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAG
CGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAA
TGCGCTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCC
AATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGAC
ACGGGAAATCGACAAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYB1KYF_003190Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003190-T1KYF_003190-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003190-T1.cdsKYF_003190-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003190-T1.exon2KYF_003190-T1.exon2Aspergillus niger KYF3exon
KYF_003190-T1.exon1KYF_003190-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR016444
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
Product synaptobrevin
ProductSNAP receptor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:762262..762889 -
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