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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:762262..762889- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003190-T1 ID=KYF_003190-T1|Name=KYF_003190-T1|organism=Aspergillus niger KYF3|type=mRNA|length=628bp|location=Sequence derived from alignment at ch3:762262..762889- (Aspergillus niger KYF3)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA
CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTC
ATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTTT
TTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT
ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA
CTCGGAAAAACATCCCGGAATGCGCTAA back to topCoding sequence (CDS) from alignment at ch3:762262..762889- >KYF_003190-T1 ID=KYF_003190-T1|Name=KYF_003190-T1|organism=Aspergillus niger KYF3|type=CDS|length=816bp|location=Sequence derived from alignment at ch3:762262..762889- (Aspergillus niger KYF3)
AAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTTAAAGTTTC
AGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGACAATTTGG
CAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGAGGAAGCAA
ATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTTTGTATCAT
TATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAGCGCTATCC
TCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAATGCGCTAA
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAG
CGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAA
TGCGCTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCC
AATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGAC
ACGGGAAATCGACAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016444 |
| DBxref | InterPro:IPR001388 |
| DBxref | PFAM:PF00957 |
| Product | synaptobrevin |
| Product | SNAP receptor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:762262..762889 - |
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