You are here

Home

KYF_003382-T1, KYF_003382-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003382-T1
Unique NameKYF_003382-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1280288..1281217+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003382-T1 ID=KYF_003382-T1|Name=KYF_003382-T1|organism=Aspergillus niger KYF3|type=mRNA|length=930bp|location=Sequence derived from alignment at ch3:1280288..1281217+ (Aspergillus niger KYF3)
ATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAATAACCGGTGCCTC
CGGAGGGTCAGTTTTCTCCTCCAATCAATCCCTGGGAATCTAGTCCTCCA
ATTGGCCCCAAATTGAATCACCAGAACTAATAAGCCTCTAACTATCAGCA
TCGGCTCCGCCTGCGCCCACAAGCTCGCCGAAAATGGCGCCCACCTAGCC
CTCACTTACTCCACCAATCTTGCCGCGATACAATCCCTCCACGCAGATCT
GCAATCTCGCCATCCTGATCTTCGCATTTCCACCCACAAAGTCGACCTCC
GCTCCGCTACCGACATCACCTTATTATTCGACCAAATCATTGCCCAACAT
GATGGCCACAGCCCCGACATCCTCATCTCCAACGCAGGCACTGGCAAACG
AATCACCAATATCTGGGACATCAACCTATCAGACTTCGACGACATGATCA
CTACTAATCTCCGCGCATCATTCATCCTAGTCAAGGGCGTGGTCGAACAC
ATGAAGGCGCAACGTTGGGGCCGTATTGTTTTTATGTCGTCTATTGCCGC
TTATGGGGGTGGTATTAATGGGTGCCGTAAGTTAATCCCTATCAATTCTA
CTTAACATATGCGTATAGGGAAAACGAACATTACTAATAGTGATTATATG
ATATATAGATTATGCAGCTTCCAAAGGTGGCCTCACCGGCATGATGAAGA
ATCTTGCTACCAGACTATCTGAGTATAATATCAGCGTGAATGATGTCGCT
CCCGCAATGATTGGGGATACGGGGATGATACCGAATGCCGAGGCTGTGCC
GGAGGTGGTGAAGGGGATCCCGTTGGGGAGGCTGGGGACACCGGAGGAGA
CGGCCAACGTGGTTCTGATGTTGGTGACCACGGGGTATATGACGGGGCAG
AGTCTTTTGCTGGCGGGAGGGTTGAGATGA
back to top

Coding sequence (CDS) from alignment at ch3:1280288..1281217+

>KYF_003382-T1 ID=KYF_003382-T1|Name=KYF_003382-T1|organism=Aspergillus niger KYF3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch3:1280288..1281217+ (Aspergillus niger KYF3)
ATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAATAACCGGTGCCTC
CGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCGAAAATGGCGCCC
ACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATACAATCCCTCCAC
GCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTCCACCCACAAAGT
CGACCTCCGCTCCGCTACCGACATCACCTTATTATTCGACCAAATCATTG
CCCAACATGATGGCCACAGCCCCGACATCCTCATCTCCAACGCAGGCACT
GGCAAACGAATCACCAATATCTGGGACATCAACCTATCAGACTTCGACGA
CATGATCACTACTAATCTCCGCGCATCATTCATCCTAGTCAAGGGCGTGG
TCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTTTTTATGTCGTCT
ATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTATGCAGCTTCCAA
AGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCAGACTATCTGAGT
ATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATTGGGGATACGGGG
ATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAAGGGGATCCCGTT
GGGGAGGCTGGGGACACCGGAGGAGACGGCCAACGTGGTTCTGATGTTGG
TGACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTGGCGGGAGGGTTG
AGATGAATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAATAACCGG
TGCCTCCGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCGAAAATG
GCGCCCACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATACAATCC
CTCCACGCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTCCACCCA
CAAAGTCGACCTCCGCTCCGCTACCGACATCACCTTATTATTCGACCAAA
TCATTGCCCAACATGATGGCCACAGCCCCGACATCCTCATCTCCAACGCA
GGCACTGGCAAACGAATCACCAATATCTGGGACATCAACCTATCAGACTT
CGACGACATGATCACTACTAATCTCCGCGCATCATTCATCCTAGTCAAGG
GCGTGGTCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTTTTTATG
TCGTCTATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTATGCAGC
TTCCAAAGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCAGACTAT
CTGAGTATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATTGGGGAT
ACGGGGATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAAGGGGAT
CCCGTTGGGGAGGCTGGGGACACCGGAGGAGACGGCCAACGTGGTTCTGA
TGTTGGTGACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTGGCGGGA
GGGTTGAGATGAATGTCCACAAACGACATCCGAGGCCGACTAGCCCTAAT
AACCGGTGCCTCCGGAGGCATCGGCTCCGCCTGCGCCCACAAGCTCGCCG
AAAATGGCGCCCACCTAGCCCTCACTTACTCCACCAATCTTGCCGCGATA
CAATCCCTCCACGCAGATCTGCAATCTCGCCATCCTGATCTTCGCATTTC
CACCCACAAAGTCGACCTCCGCTCCGCTACCGACATCACCTTATTATTCG
ACCAAATCATTGCCCAACATGATGGCCACAGCCCCGACATCCTCATCTCC
AACGCAGGCACTGGCAAACGAATCACCAATATCTGGGACATCAACCTATC
AGACTTCGACGACATGATCACTACTAATCTCCGCGCATCATTCATCCTAG
TCAAGGGCGTGGTCGAACACATGAAGGCGCAACGTTGGGGCCGTATTGTT
TTTATGTCGTCTATTGCCGCTTATGGGGGTGGTATTAATGGGTGCCATTA
TGCAGCTTCCAAAGGTGGCCTCACCGGCATGATGAAGAATCTTGCTACCA
GACTATCTGAGTATAATATCAGCGTGAATGATGTCGCTCCCGCAATGATT
GGGGATACGGGGATGATACCGAATGCCGAGGCTGTGCCGGAGGTGGTGAA
GGGGATCCCGTTGGGGAGGCTGGGGACACCGGAGGAGACGGCCAACGTGG
TTCTGATGTTGGTGACCACGGGGTATATGACGGGGCAGAGTCTTTTGCTG
GCGGGAGGGTTGAGATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003382KYF_003382Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003382-T1.exon1KYF_003382-T1.exon1Aspergillus niger KYF3exon
KYF_003382-T1.exon2KYF_003382-T1.exon2Aspergillus niger KYF3exon
KYF_003382-T1.exon3KYF_003382-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003382-T1.cdsKYF_003382-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003382-T1KYF_003382-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1280288..1281217 +
Powered by Drupal