You are here

KYF_003514-T1, KYF_003514-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003514-T1
Unique NameKYF_003514-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1648320..1648911+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003514-T1 ID=KYF_003514-T1|Name=KYF_003514-T1|organism=Aspergillus niger KYF3|type=mRNA|length=592bp|location=Sequence derived from alignment at ch3:1648320..1648911+ (Aspergillus niger KYF3)
ATGCTTACCCTGACCGTCCCTGAAAACTACGGGTATGTGCCAATTCTACA ATTCCTTGCAGACAATGCCATTCTCCCCATGAAGTCTGATGCTAACTATC CTGCAGCTCTGTCATTGCCGTCGCTCTGGGTGCCATCCCCGTCCTGAGCT TCGTCCATGGCGCCGTCGTGTCTCGTCTCCGCAAGGAAGCTGATTGCCCC TACCCTCACTGCTATGCGACCGTAGAGCAGTGCAAGACCAACGTAAGCCA ACCTCACACAAACAGGATTCCTCGAGCTAACATACATTCCGAACCGTGCA GCCCAAGGCCGAGCAGTTCAACTGCGCTCAGCGCGCTCATGCCAACTTCC TTGAGAACTCCAGCCAAACTATGCTCTTCCTCCTGGTAGCTGGACTGAAG TACCCCCAGTTGGCGACTGGCCTCGGAAGCATCTGGGTCCTCGGTCGCTC ACTGTTCCTTTACGGATATGTGTACTCCGGCAAGCCGCGGGGTCGCGGTC GTTTGTACGGCAGCTTCTACTTGCTTGCACAGGGAGCTCTCTGGGGCTTG ACGTCTTTTGGAGTTGCGAGGGAGTTGATTTCCTACTTCTAA
back to top

Coding sequence (CDS) from alignment at ch3:1648320..1648911+

>KYF_003514-T1 ID=KYF_003514-T1|Name=KYF_003514-T1|organism=Aspergillus niger KYF3|type=CDS|length=1377bp|location=Sequence derived from alignment at ch3:1648320..1648911+ (Aspergillus niger KYF3)
ATGCTTACCCTGACCGTCCCTGAAAACTACGGCTCTGTCATTGCCGTCGC
TCTGGGTGCCATCCCCGTCCTGAGCTTCGTCCATGGCGCCGTCGTGTCTC
GTCTCCGCAAGGAAGCTGATTGCCCCTACCCTCACTGCTATGCGACCGTA
GAGCAGTGCAAGACCAACCCCAAGGCCGAGCAGTTCAACTGCGCTCAGCG
CGCTCATGCCAACTTCCTTGAGAACTCCAGCCAAACTATGCTCTTCCTCC
TGGTAGCTGGACTGAAGTACCCCCAGTTGGCGACTGGCCTCGGAAGCATC
TGGGTCCTCGGTCGCTCACTGTTCCTTTACGGATATGTGTACTCCGGCAA
GCCGCGGGGTCGCGGTCGTTTGTACGGCAGCTTCTACTTGCTTGCACAGG
GAGCTCTCTGGGGCTTGACGTCTTTTGGAGTTGCGAGGGAGTTGATTTCC
TACTTCTAAATGCTTACCCTGACCGTCCCTGAAAACTACGGCTCTGTCAT
TGCCGTCGCTCTGGGTGCCATCCCCGTCCTGAGCTTCGTCCATGGCGCCG
TCGTGTCTCGTCTCCGCAAGGAAGCTGATTGCCCCTACCCTCACTGCTAT
GCGACCGTAGAGCAGTGCAAGACCAACCCCAAGGCCGAGCAGTTCAACTG
CGCTCAGCGCGCTCATGCCAACTTCCTTGAGAACTCCAGCCAAACTATGC
TCTTCCTCCTGGTAGCTGGACTGAAGTACCCCCAGTTGGCGACTGGCCTC
GGAAGCATCTGGGTCCTCGGTCGCTCACTGTTCCTTTACGGATATGTGTA
CTCCGGCAAGCCGCGGGGTCGCGGTCGTTTGTACGGCAGCTTCTACTTGC
TTGCACAGGGAGCTCTCTGGGGCTTGACGTCTTTTGGAGTTGCGAGGGAG
TTGATTTCCTACTTCTAAATGCTTACCCTGACCGTCCCTGAAAACTACGG
CTCTGTCATTGCCGTCGCTCTGGGTGCCATCCCCGTCCTGAGCTTCGTCC
ATGGCGCCGTCGTGTCTCGTCTCCGCAAGGAAGCTGATTGCCCCTACCCT
CACTGCTATGCGACCGTAGAGCAGTGCAAGACCAACCCCAAGGCCGAGCA
GTTCAACTGCGCTCAGCGCGCTCATGCCAACTTCCTTGAGAACTCCAGCC
AAACTATGCTCTTCCTCCTGGTAGCTGGACTGAAGTACCCCCAGTTGGCG
ACTGGCCTCGGAAGCATCTGGGTCCTCGGTCGCTCACTGTTCCTTTACGG
ATATGTGTACTCCGGCAAGCCGCGGGGTCGCGGTCGTTTGTACGGCAGCT
TCTACTTGCTTGCACAGGGAGCTCTCTGGGGCTTGACGTCTTTTGGAGTT
GCGAGGGAGTTGATTTCCTACTTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003514KYF_003514Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003514-T1.exon1KYF_003514-T1.exon1Aspergillus niger KYF3exon
KYF_003514-T1.exon2KYF_003514-T1.exon2Aspergillus niger KYF3exon
KYF_003514-T1.exon3KYF_003514-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003514-T1.cdsKYF_003514-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003514-T1KYF_003514-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001129
DBxrefInterPro:IPR023352
DBxrefPFAM:PF01124
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1648320..1648911 +