You are here

Home

KYF_003589-T1, KYF_003589-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003589-T1
Unique NameKYF_003589-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1950869..1952341+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003589-T1 ID=KYF_003589-T1|Name=KYF_003589-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1473bp|location=Sequence derived from alignment at ch3:1950869..1952341+ (Aspergillus niger KYF3)
ATGTCGCTTACACAGTCTTCTGCCGGCAGTATCGCAAGCGCCGCATCCGT
AGCTGCTCGGCGGCTAGCGGTCCTATCAAACGCCGAGCGCAATGAAGCAT
TAACGGCGCTCTATGAGGGTCTTTTGGCTAATAAGGACGCCATCTTGGCC
GCCAATGCAAAGGATGTCGCATTGGCAAGCCGTGCCGCGGAGGATGGTGA
TTTGAATTCCAGCGTATTGAAGAGGCTTGACTTATCAAGGCCGGGGAAAT
ATGATGATATGTTGCAAGGAATCCTCAGTGTGCGGGGTTTGAACGATCCA
AGTAAGAATGTTCAATTGATTCAAAGTACGCGTTCTGACCTGTCGAAGTT
GGAAATGTGACTCTGAGGACACTGCTCGATGACGGAATTACTTTGGAGAG
GGTGAGCTGTCCCATTGGGGTGTTGTTGATAATTTTCGAAGCTCGCCCTG
AGGTGATCGCGAATATTGCTGCCTTATCTATCAAGTCTGGCAATGCGGCT
ATCCTGAAAGGTTGCTCCCGATTACATACCCGCTTTGAATCTTCATGCAT
TGCTGACCATAATAACAGGTGGGAAAGAATCAACCGAATCTTTTGTCGCA
ATATCGACGGTGATCTCCCAGGCCATATCAGGCACTCGTGTTCCCAAGTC
CTCCATCCAGCTCGTACAGACCAGAGATGTAGTTTCTTCATTGCTGGCCC
AGGACACTTTGATTGATCTAGTCATCCCTCGCGGTTCGAATGACCTTGTT
CGCTTCGTCAAAGACAACACCAAAATTCCAGTATTAGGCCACGCAGACGG
CCTTTGCTCCGCTTACATACATCATGACGCGGACCCGGAAGTTTCTGTCA
AAGTGCTCGTGGATTCCAAGACGGATTATCCTGCCGCTTGCAACTCTCTA
GAGACCCTGCTGGTGAATGAAGCAGTCTTGAGGACCATACTACCTACTGT
TGCCAGAGCCCTCGTGGCGAAGGGCGTTACTCTGAAGTGTGACGAATCCT
CGAAACGTGCGCTAGCCGATACTTTAGAGCCTGCGCAAATGGGTTCTATC
CTGGATGCCGTTGAGTCCGACTATGACACAGAATTTTTGGATCTCATCCT
TGCTATCAAAACGATACCTACATCTGCTCCCGGTTCAGGTGTTGATGCAG
CGATTGACCACATCAATACCCATTCCTCAAAACACACCGACATAATTTTG
ACCAATTCGAAGGCCACTGCGGATTACTTCATGAGCAGCATCGACAGTGC
TGGTGTTTTCTGGAATGCTTCAACGAGATTTGCAGACGGTATGAGGTATG
GCTTTGGCACAGAGGTCGGGATCAGCACCAATAAGATTCACTCCAGAGGC
CCTGTGGGACTAGATGGCCTCACAATTTACAAGTACCTCATTCGTGGAGA
TGGGCATAGAGCAGGAGACTACTTTGATGGTGCTGGGGGTAAAAAATGGA
AACACAAAGCTCTACCATTTTGA
back to top

Coding sequence (CDS) from alignment at ch3:1950869..1952341+

>KYF_003589-T1 ID=KYF_003589-T1|Name=KYF_003589-T1|organism=Aspergillus niger KYF3|type=CDS|length=4104bp|location=Sequence derived from alignment at ch3:1950869..1952341+ (Aspergillus niger KYF3)
ATGTCGCTTACACAGTCTTCTGCCGGCAGTATCGCAAGCGCCGCATCCGT
AGCTGCTCGGCGGCTAGCGGTCCTATCAAACGCCGAGCGCAATGAAGCAT
TAACGGCGCTCTATGAGGGTCTTTTGGCTAATAAGGACGCCATCTTGGCC
GCCAATGCAAAGGATGTCGCATTGGCAAGCCGTGCCGCGGAGGATGGTGA
TTTGAATTCCAGCGTATTGAAGAGGCTTGACTTATCAAGGCCGGGGAAAT
ATGATGATATGTTGCAAGGAATCCTCAGTGTGCGGGGTTTGAACGATCCA
ATTGGAAATGTGACTCTGAGGACACTGCTCGATGACGGAATTACTTTGGA
GAGGGTGAGCTGTCCCATTGGGGTGTTGTTGATAATTTTCGAAGCTCGCC
CTGAGGTGATCGCGAATATTGCTGCCTTATCTATCAAGTCTGGCAATGCG
GCTATCCTGAAAGGTGGGAAAGAATCAACCGAATCTTTTGTCGCAATATC
GACGGTGATCTCCCAGGCCATATCAGGCACTCGTGTTCCCAAGTCCTCCA
TCCAGCTCGTACAGACCAGAGATGTAGTTTCTTCATTGCTGGCCCAGGAC
ACTTTGATTGATCTAGTCATCCCTCGCGGTTCGAATGACCTTGTTCGCTT
CGTCAAAGACAACACCAAAATTCCAGTATTAGGCCACGCAGACGGCCTTT
GCTCCGCTTACATACATCATGACGCGGACCCGGAAGTTTCTGTCAAAGTG
CTCGTGGATTCCAAGACGGATTATCCTGCCGCTTGCAACTCTCTAGAGAC
CCTGCTGGTGAATGAAGCAGTCTTGAGGACCATACTACCTACTGTTGCCA
GAGCCCTCGTGGCGAAGGGCGTTACTCTGAAGTGTGACGAATCCTCGAAA
CGTGCGCTAGCCGATACTTTAGAGCCTGCGCAAATGGGTTCTATCCTGGA
TGCCGTTGAGTCCGACTATGACACAGAATTTTTGGATCTCATCCTTGCTA
TCAAAACGATACCTACATCTGCTCCCGGTTCAGGTGTTGATGCAGCGATT
GACCACATCAATACCCATTCCTCAAAACACACCGACATAATTTTGACCAA
TTCGAAGGCCACTGCGGATTACTTCATGAGCAGCATCGACAGTGCTGGTG
TTTTCTGGAATGCTTCAACGAGATTTGCAGACGGTATGAGGTATGGCTTT
GGCACAGAGGTCGGGATCAGCACCAATAAGATTCACTCCAGAGGCCCTGT
GGGACTAGATGGCCTCACAATTTACAAGTACCTCATTCGTGGAGATGGGC
ATAGAGCAGGAGACTACTTTGATGGTGCTGGGGGTAAAAAATGGAAACAC
AAAGCTCTACCATTTTGAATGTCGCTTACACAGTCTTCTGCCGGCAGTAT
CGCAAGCGCCGCATCCGTAGCTGCTCGGCGGCTAGCGGTCCTATCAAACG
CCGAGCGCAATGAAGCATTAACGGCGCTCTATGAGGGTCTTTTGGCTAAT
AAGGACGCCATCTTGGCCGCCAATGCAAAGGATGTCGCATTGGCAAGCCG
TGCCGCGGAGGATGGTGATTTGAATTCCAGCGTATTGAAGAGGCTTGACT
TATCAAGGCCGGGGAAATATGATGATATGTTGCAAGGAATCCTCAGTGTG
CGGGGTTTGAACGATCCAATTGGAAATGTGACTCTGAGGACACTGCTCGA
TGACGGAATTACTTTGGAGAGGGTGAGCTGTCCCATTGGGGTGTTGTTGA
TAATTTTCGAAGCTCGCCCTGAGGTGATCGCGAATATTGCTGCCTTATCT
ATCAAGTCTGGCAATGCGGCTATCCTGAAAGGTGGGAAAGAATCAACCGA
ATCTTTTGTCGCAATATCGACGGTGATCTCCCAGGCCATATCAGGCACTC
GTGTTCCCAAGTCCTCCATCCAGCTCGTACAGACCAGAGATGTAGTTTCT
TCATTGCTGGCCCAGGACACTTTGATTGATCTAGTCATCCCTCGCGGTTC
GAATGACCTTGTTCGCTTCGTCAAAGACAACACCAAAATTCCAGTATTAG
GCCACGCAGACGGCCTTTGCTCCGCTTACATACATCATGACGCGGACCCG
GAAGTTTCTGTCAAAGTGCTCGTGGATTCCAAGACGGATTATCCTGCCGC
TTGCAACTCTCTAGAGACCCTGCTGGTGAATGAAGCAGTCTTGAGGACCA
TACTACCTACTGTTGCCAGAGCCCTCGTGGCGAAGGGCGTTACTCTGAAG
TGTGACGAATCCTCGAAACGTGCGCTAGCCGATACTTTAGAGCCTGCGCA
AATGGGTTCTATCCTGGATGCCGTTGAGTCCGACTATGACACAGAATTTT
TGGATCTCATCCTTGCTATCAAAACGATACCTACATCTGCTCCCGGTTCA
GGTGTTGATGCAGCGATTGACCACATCAATACCCATTCCTCAAAACACAC
CGACATAATTTTGACCAATTCGAAGGCCACTGCGGATTACTTCATGAGCA
GCATCGACAGTGCTGGTGTTTTCTGGAATGCTTCAACGAGATTTGCAGAC
GGTATGAGGTATGGCTTTGGCACAGAGGTCGGGATCAGCACCAATAAGAT
TCACTCCAGAGGCCCTGTGGGACTAGATGGCCTCACAATTTACAAGTACC
TCATTCGTGGAGATGGGCATAGAGCAGGAGACTACTTTGATGGTGCTGGG
GGTAAAAAATGGAAACACAAAGCTCTACCATTTTGAATGTCGCTTACACA
GTCTTCTGCCGGCAGTATCGCAAGCGCCGCATCCGTAGCTGCTCGGCGGC
TAGCGGTCCTATCAAACGCCGAGCGCAATGAAGCATTAACGGCGCTCTAT
GAGGGTCTTTTGGCTAATAAGGACGCCATCTTGGCCGCCAATGCAAAGGA
TGTCGCATTGGCAAGCCGTGCCGCGGAGGATGGTGATTTGAATTCCAGCG
TATTGAAGAGGCTTGACTTATCAAGGCCGGGGAAATATGATGATATGTTG
CAAGGAATCCTCAGTGTGCGGGGTTTGAACGATCCAATTGGAAATGTGAC
TCTGAGGACACTGCTCGATGACGGAATTACTTTGGAGAGGGTGAGCTGTC
CCATTGGGGTGTTGTTGATAATTTTCGAAGCTCGCCCTGAGGTGATCGCG
AATATTGCTGCCTTATCTATCAAGTCTGGCAATGCGGCTATCCTGAAAGG
TGGGAAAGAATCAACCGAATCTTTTGTCGCAATATCGACGGTGATCTCCC
AGGCCATATCAGGCACTCGTGTTCCCAAGTCCTCCATCCAGCTCGTACAG
ACCAGAGATGTAGTTTCTTCATTGCTGGCCCAGGACACTTTGATTGATCT
AGTCATCCCTCGCGGTTCGAATGACCTTGTTCGCTTCGTCAAAGACAACA
CCAAAATTCCAGTATTAGGCCACGCAGACGGCCTTTGCTCCGCTTACATA
CATCATGACGCGGACCCGGAAGTTTCTGTCAAAGTGCTCGTGGATTCCAA
GACGGATTATCCTGCCGCTTGCAACTCTCTAGAGACCCTGCTGGTGAATG
AAGCAGTCTTGAGGACCATACTACCTACTGTTGCCAGAGCCCTCGTGGCG
AAGGGCGTTACTCTGAAGTGTGACGAATCCTCGAAACGTGCGCTAGCCGA
TACTTTAGAGCCTGCGCAAATGGGTTCTATCCTGGATGCCGTTGAGTCCG
ACTATGACACAGAATTTTTGGATCTCATCCTTGCTATCAAAACGATACCT
ACATCTGCTCCCGGTTCAGGTGTTGATGCAGCGATTGACCACATCAATAC
CCATTCCTCAAAACACACCGACATAATTTTGACCAATTCGAAGGCCACTG
CGGATTACTTCATGAGCAGCATCGACAGTGCTGGTGTTTTCTGGAATGCT
TCAACGAGATTTGCAGACGGTATGAGGTATGGCTTTGGCACAGAGGTCGG
GATCAGCACCAATAAGATTCACTCCAGAGGCCCTGTGGGACTAGATGGCC
TCACAATTTACAAGTACCTCATTCGTGGAGATGGGCATAGAGCAGGAGAC
TACTTTGATGGTGCTGGGGGTAAAAAATGGAAACACAAAGCTCTACCATT
TTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661NADP binding
GO:0004350glutamate-5-semialdehyde dehydrogenase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006561proline biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_003589KYF_003589Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003589-T1.exon1KYF_003589-T1.exon1Aspergillus niger KYF3exon
KYF_003589-T1.exon2KYF_003589-T1.exon2Aspergillus niger KYF3exon
KYF_003589-T1.exon3KYF_003589-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003589-T1.cdsKYF_003589-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003589-T1KYF_003589-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926388H
DBxrefInterPro:IPR016161
DBxrefInterPro:IPR016163
DBxrefInterPro:IPR012134
DBxrefInterPro:IPR016162
DBxrefInterPro:IPR000965
DBxrefInterPro:IPR015590
DBxrefPFAM:PF00171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1950869..1952341 +
Powered by Drupal