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KYF_003593-T1, KYF_003593-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003593-T1
Unique NameKYF_003593-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2048039..2049080-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003593-T1 ID=KYF_003593-T1|Name=KYF_003593-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1042bp|location=Sequence derived from alignment at ch3:2048039..2049080- (Aspergillus niger KYF3)
ATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATT
CCAGGTAATCTTTCCTCACCCCATCCGGCTCTTTCGGCGAAGTCATATTA
ATAGCTTTCAGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGAC
ATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTC
GGCTGAATCCAGTGCACTGTTAGCGCTCTCACGACTACCTTGAACAACCA
GGAGAGCTAACTTGTGTTCTTACAGACAATCGACCGAACTGCAAACGAAA
CAATGGTCTGAACTTTGACTGATAATTCCAATAAATTGGTCTCGATGACA
TGCGCTTACTCATGATTAGGAGGGAACGCCTTGAGAGCATTAATAGTAAG
GCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAG
GAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACA
GTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTAC
TACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGA
ACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGA
ATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAAC
CCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTA
TGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGGTATAT
TGCTATTCTCATCTCGCTTTGTCCTGGTCACTGTTTGCCACGTCACTAAC
GATATCGTGGACACAGATGTAGCTGCAAACATGGACAGCACTCTTCCAGA
AGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAG
ATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTC
GTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAA
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Coding sequence (CDS) from alignment at ch3:2048039..2049080-

>KYF_003593-T1 ID=KYF_003593-T1|Name=KYF_003593-T1|organism=Aspergillus niger KYF3|type=CDS|length=3960bp|location=Sequence derived from alignment at ch3:2048039..2049080- (Aspergillus niger KYF3)
ATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTT
GAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGA
CTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCC
CTTTAACTACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAA
TAGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCC
TCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGA
TCTTACAGTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGC
CGCTTACTACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAA
TCGTTGAACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGT
CAGGAGAATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGA
CGGCAACCCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATG
CTTTCTATGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTC
GACAATCGACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAG
GCTACAGCACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGAT
TCCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTC
CTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCT
GCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTA
CCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCT
TAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACT
ACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGG
CTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGG
AAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAG
TGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACT
ACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAA
CGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAA
TTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACC
CTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTAT
GGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCG
ACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGC
ACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCA
CCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTC
TCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACAT
GGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCAC
AATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATC
CTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACG
CAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTT
CCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGA
GTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGA
ACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAAC
CTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGAC
CGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAA
GAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTT
GTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGG
CATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACT
GCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTC
TGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAG
CCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTAC
TCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCA
CTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGT
CAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAA
CGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCAT
AAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAG
CGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCC
TTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAA
TTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGT
CTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTA
GAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACA
CTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGAC
ATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAG
CAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGA
AACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAA
CCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCT
GAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGC
ACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCACTCTTCCA
GAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCA
AGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCT
TCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAAGAGGGA
ACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAGCGTTCAAG
CTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTC
TGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAATTTTTCGC
CGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGTCTCGGGGC
CGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTAGAAGTAAC
TTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACACTTCGACG
CTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGACATGGCTAG
CATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAGCAAATGTC
TGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGAAACAATGT
TACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAACCCATCAT
GCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAATCCAG
TGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAG
ACAATTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM10KYF_003593Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003593-T1KYF_003593-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003593-T1.cdsKYF_003593-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003593-T1.exon5KYF_003593-T1.exon5Aspergillus niger KYF3exon
KYF_003593-T1.exon4KYF_003593-T1.exon4Aspergillus niger KYF3exon
KYF_003593-T1.exon3KYF_003593-T1.exon3Aspergillus niger KYF3exon
KYF_003593-T1.exon2KYF_003593-T1.exon2Aspergillus niger KYF3exon
KYF_003593-T1.exon1KYF_003593-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR001848
DBxrefInterPro:IPR036838
DBxrefInterPro:IPR027486
DBxrefPFAM:PF00338
Productmitochondrial 37S ribosomal protein rsm10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2048039..2049080 -
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