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KYF_003616-T1, KYF_003616-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_003616-T1
Unique NameKYF_003616-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2119854..2120339-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_003616-T1 ID=KYF_003616-T1|Name=KYF_003616-T1|organism=Aspergillus niger KYF3|type=mRNA|length=486bp|location=Sequence derived from alignment at ch3:2119854..2120339- (Aspergillus niger KYF3)
ATGGCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTC
CATTGCTATCACCGTTGAGTTCACGTTCGGCTCTCACCCATATCATGCAA
GCACCCCAGGTTTGCACTCATTACTGATTCGGCTTTCGCAAACAGGGGAG
GTCTGGAGATCTTGTTTGCCAATGAGCGCAAACACCACGTCACGCTACCT
TCGCTTCTTGACGACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCA
TCTGGTGAAGAACTACATGAAGGATCAGAGGCAGGAATTGTTCATACTGG
AAGGCAATGTGTACGTTCACCGTATGGGAATACACGGCAAGGCAAGAACA
CTGACGTTGGGCGAACAGTCGACCGGGAATCTTGGTTCTCATCAACGACG
CCGATTGGGAGCTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGAT
AACATTGTCTTCGTTTCTACGCTTCATGGGGGCTAG
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Coding sequence (CDS) from alignment at ch3:2119854..2120339-

>KYF_003616-T1 ID=KYF_003616-T1|Name=KYF_003616-T1|organism=Aspergillus niger KYF3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch3:2119854..2120339- (Aspergillus niger KYF3)
TCGACCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAGCTCGAAG
GCGAGGAGAACTACGAACTTCAACAAAATGATAACATTGTCTTCGTTTCT
ACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTTGTTTGCCAATGAGC
GCAAACACCACGTCACGCTACCTTCGCTTCTTGACGACGGCAGCCGGCCA
ACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACTACATGAAGGATCA
GAGGCAGGAATTGTTCATACTGGAAGGCAATGTATGGCCACGAATTCTGG
AGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCATTGCTATCACCGTTG
AGTTCACTCGACCGGGAATCTTGGTTCTCATCAACGACGCCGATTGGGAG
CTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGATAACATTGTCTT
CGTTTCTACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTTGTTTGCC
AATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACGACGGCAG
CCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAACTACATGA
AGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTATGGCCACGA
ATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCATTGCTATC
ACCGTTGAGTTCACTCGACCGGGAATCTTGGTTCTCATCAACGACGCCGA
TTGGGAGCTCGAAGGCGAGGAGAACTACGAACTTCAACAAAATGATAACA
TTGTCTTCGTTTCTACGCTTCATGGGGGCTAGGGGAGGTCTGGAGATCTT
GTTTGCCAATGAGCGCAAACACCACGTCACGCTACCTTCGCTTCTTGACG
ACGGCAGCCGGCCAACTATCAGCTACCTCCTGGGTCATCTGGTGAAGAAC
TACATGAAGGATCAGAGGCAGGAATTGTTCATACTGGAAGGCAATGTATG
GCCACGAATTCTGGAGCCCCTGATCTGGGCAAAGATGGCTCCGGCTCCAT
TGCTATCACCGTTGAGTTCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0034227tRNA thio-modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
URM1KYF_003616Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_003616-T1KYF_003616-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003616-T1.cdsKYF_003616-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_003616-T1.exon3KYF_003616-T1.exon3Aspergillus niger KYF3exon
KYF_003616-T1.exon2KYF_003616-T1.exon2Aspergillus niger KYF3exon
KYF_003616-T1.exon1KYF_003616-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteBUSCO:EOG09265K1R
DBxrefInterPro:IPR016155
DBxrefInterPro:IPR015221
DBxrefInterPro:IPR012675
DBxrefPFAM:PF09138
DBxrefPFAM:PF02597
ProductUbiquitin- modifier 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2119854..2120339 -
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