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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2855270..2856437- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003864-T1 ID=KYF_003864-T1|Name=KYF_003864-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1168bp|location=Sequence derived from alignment at ch3:2855270..2856437- (Aspergillus niger KYF3)
ATGTCGGCCGGGGGAGAACACCTCAAGGATGAGGTACGCAGCCACCTCAG
ATCCCCATGCACCATCCATCCATTTAACAATCCAGCCATGGACATCCCAG
GCCCCTAGCACCATCTCTCAATCCTCAATCCAAATGCACAAGCTAATCAA
CTCTACAACTATCCAGGGCACACGACGACAAGTCGTCCTAGCAGGCGGAA
TAGCCGGCCTCGTATCACGGTGCGCCCACACCCATATCCCCTAAAACAAT
CTTCCAAACAACCACCTAATCCATCAATATACATCCAGATTCTGCGTCGC
CCCCCTCGACGTCGTCAAAATCCGCCTGCAGCTACAAATACATTCCCTAT
CGGACCCCATCTCCCACCGCGATGTAACCGGTCCCATCTACAAGGGCACC
CTCTCGACAATGCGAGATATCATCCGTCAAGAGGGTATAACAGGCCTCTG
GAAAGGCAACATCCCCGCCGAACTAATGTACGTCTGCTACGGGGTGATCC
AATTCAGCGCATACCGAACAACAACCCAAGCGCTAGCACAACTCGACACC
TATCGTCTTCCACCATCCGCAGAGTCCTTCGTCGCGGGCGCCACAGCCGG
AGGTCTCGCAACGGCATCTACATACCCACTGGATCTACTGAGGACGCGGT
TCGCCGCGCAGGGCACGGACCGGGTGTACACGTCGCTGATGTCGTCGGTG
AGGGATATTGCGCGGAATGAAGGGTATGCCGGGTTTTTTCGGGGGTGTAG
TGCGGCGGTGGGACAGATTGTCCCGTATATGGGACTGTTCTTCGCGACGT
ATGAGGCGTTGAGGCCGCCGTTGGCGCAGTATCAGGATTTGCCGTTTGGA
TCGGGGGATGCGGCGGCCGGTGTGATTGCGAGTGTGTCGTCGAAGACGGT
GATGTTTCCGTTGGATTTGATTCGGAAGAGGTTGCAGGTGCAGGGCCCGA
CGCGGCAGTTATATATTCATCGCAATATTCCTGAGTATCAGGGTGTGTTT
AATACGATGAAATTGATCCTACGGACACAGGGTATCCGGGGACTTTATCG
GGGCTTGACGGTCAGCTTGTTCAAGGCTGCTCCCGCGAGTGCGGTGACGA
TGTGGACCTATGAGACTTCTTTACGGCTTCTCCAGGATATGGAGGTAGCT
ACGAGCAAGGAGGATTGA back to topCoding sequence (CDS) from alignment at ch3:2855270..2856437- >KYF_003864-T1 ID=KYF_003864-T1|Name=KYF_003864-T1|organism=Aspergillus niger KYF3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch3:2855270..2856437- (Aspergillus niger KYF3)
ATTCTGCGTCGCCCCCCTCGACGTCGTCAAAATCCGCCTGCAGCTACAAA
TACATTCCCTATCGGACCCCATCTCCCACCGCGATGTAACCGGTCCCATC
TACAAGGGCACCCTCTCGACAATGCGAGATATCATCCGTCAAGAGGGTAT
AACAGGCCTCTGGAAAGGCAACATCCCCGCCGAACTAATGTACGTCTGCT
ACGGGGTGATCCAATTCAGCGCATACCGAACAACAACCCAAGCGCTAGCA
CAACTCGACACCTATCGTCTTCCACCATCCGCAGAGTCCTTCGTCGCGGG
CGCCACAGCCGGAGGTCTCGCAACGGCATCTACATACCCACTGGATCTAC
TGAGGACGCGGTTCGCCGCGCAGGGCACGGACCGGGTGTACACGTCGCTG
ATGTCGTCGGTGAGGGATATTGCGCGGAATGAAGGGTATGCCGGGTTTTT
TCGGGGGTGTAGTGCGGCGGTGGGACAGATTGTCCCGTATATGGGACTGT
TCTTCGCGACGTATGAGGCGTTGAGGCCGCCGTTGGCGCAGTATCAGGAT
TTGCCGTTTGGATCGGGGGATGCGGCGGCCGGTGTGATTGCGAGTGTGTC
GTCGAAGACGGTGATGTTTCCGTTGGATTTGATTCGGAAGAGGTTGCAGG
TGCAGGGCCCGACGCGGCAGTTATATATTCATCGCAATATTCCTGAGTAT
CAGGGTGTGTTTAATACGATGAAATTGATCCTACGGACACAGGGTATCCG
GGGACTTTATCGGGGCTTGACGGTCAGCTTGTTCAAGGCTGCTCCCGCGA
GTGCGGTGACGATGTGGACCTATGAGACTTCTTTACGGCTTCTCCAGGAT
ATGGAGGTAGCTACGAGCAAGGAGGATTGAGGCACACGACGACAAGTCGT
CCTAGCAGGCGGAATAGCCGGCCTCGTATCACGATGTCGGCCGGGGGAGA
ACACCTCAAGGATGAGATTCTGCGTCGCCCCCCTCGACGTCGTCAAAATC
CGCCTGCAGCTACAAATACATTCCCTATCGGACCCCATCTCCCACCGCGA
TGTAACCGGTCCCATCTACAAGGGCACCCTCTCGACAATGCGAGATATCA
TCCGTCAAGAGGGTATAACAGGCCTCTGGAAAGGCAACATCCCCGCCGAA
CTAATGTACGTCTGCTACGGGGTGATCCAATTCAGCGCATACCGAACAAC
AACCCAAGCGCTAGCACAACTCGACACCTATCGTCTTCCACCATCCGCAG
AGTCCTTCGTCGCGGGCGCCACAGCCGGAGGTCTCGCAACGGCATCTACA
TACCCACTGGATCTACTGAGGACGCGGTTCGCCGCGCAGGGCACGGACCG
GGTGTACACGTCGCTGATGTCGTCGGTGAGGGATATTGCGCGGAATGAAG
GGTATGCCGGGTTTTTTCGGGGGTGTAGTGCGGCGGTGGGACAGATTGTC
CCGTATATGGGACTGTTCTTCGCGACGTATGAGGCGTTGAGGCCGCCGTT
GGCGCAGTATCAGGATTTGCCGTTTGGATCGGGGGATGCGGCGGCCGGTG
TGATTGCGAGTGTGTCGTCGAAGACGGTGATGTTTCCGTTGGATTTGATT
CGGAAGAGGTTGCAGGTGCAGGGCCCGACGCGGCAGTTATATATTCATCG
CAATATTCCTGAGTATCAGGGTGTGTTTAATACGATGAAATTGATCCTAC
GGACACAGGGTATCCGGGGACTTTATCGGGGCTTGACGGTCAGCTTGTTC
AAGGCTGCTCCCGCGAGTGCGGTGACGATGTGGACCTATGAGACTTCTTT
ACGGCTTCTCCAGGATATGGAGGTAGCTACGAGCAAGGAGGATTGAGGCA
CACGACGACAAGTCGTCCTAGCAGGCGGAATAGCCGGCCTCGTATCACGA
TGTCGGCCGGGGGAGAACACCTCAAGGATGAGATTCTGCGTCGCCCCCCT
CGACGTCGTCAAAATCCGCCTGCAGCTACAAATACATTCCCTATCGGACC
CCATCTCCCACCGCGATGTAACCGGTCCCATCTACAAGGGCACCCTCTCG
ACAATGCGAGATATCATCCGTCAAGAGGGTATAACAGGCCTCTGGAAAGG
CAACATCCCCGCCGAACTAATGTACGTCTGCTACGGGGTGATCCAATTCA
GCGCATACCGAACAACAACCCAAGCGCTAGCACAACTCGACACCTATCGT
CTTCCACCATCCGCAGAGTCCTTCGTCGCGGGCGCCACAGCCGGAGGTCT
CGCAACGGCATCTACATACCCACTGGATCTACTGAGGACGCGGTTCGCCG
CGCAGGGCACGGACCGGGTGTACACGTCGCTGATGTCGTCGGTGAGGGAT
ATTGCGCGGAATGAAGGGTATGCCGGGTTTTTTCGGGGGTGTAGTGCGGC
GGTGGGACAGATTGTCCCGTATATGGGACTGTTCTTCGCGACGTATGAGG
CGTTGAGGCCGCCGTTGGCGCAGTATCAGGATTTGCCGTTTGGATCGGGG
GATGCGGCGGCCGGTGTGATTGCGAGTGTGTCGTCGAAGACGGTGATGTT
TCCGTTGGATTTGATTCGGAAGAGGTTGCAGGTGCAGGGCCCGACGCGGC
AGTTATATATTCATCGCAATATTCCTGAGTATCAGGGTGTGTTTAATACG
ATGAAATTGATCCTACGGACACAGGGTATCCGGGGACTTTATCGGGGCTT
GACGGTCAGCTTGTTCAAGGCTGCTCCCGCGAGTGCGGTGACGATGTGGA
CCTATGAGACTTCTTTACGGCTTCTCCAGGATATGGAGGTAGCTACGAGC
AAGGAGGATTGAGGCACACGACGACAAGTCGTCCTAGCAGGCGGAATAGC
CGGCCTCGTATCACGATGTCGGCCGGGGGAGAACACCTCAAGGATGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR023395 |
| DBxref | InterPro:IPR002067 |
| DBxref | PFAM:PF00153 |
| Product | mitochondrial thiamine pyrophosphate transporter |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2855270..2856437 - |
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