|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3158522..3161159- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_003972-T1 ID=KYF_003972-T1|Name=KYF_003972-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2638bp|location=Sequence derived from alignment at ch3:3158522..3161159- (Aspergillus niger KYF3)
ATGCCAATCGCAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGC
GTCTGTTATTTCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACG
CCTTGGATGCCGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATACA
CTTGATGTAATACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGA
TCATCCTTTTGTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCG
AAGATCTTAGAACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCA
CTTGCTAGTGCGGCTGAGGTATCCCGTGGCGTGACTATCACCACTAGATT
ACAGCATGAGCCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGC
TTCTAAGGTGATTCCTACCGCCAATTGAGATAACCAAAGCTGACCGATGT
AGTACCCAGCGAGCGTCACATCCGGTAGGAACCAGTGTTCGCATAGCGGA
TTTGTTCAAACACATCCCAGTCCGGAGACAAACTACGTTAAAGAAAGCGG
CCAAGACGGTCGTGAGGATCAAGAAGCTCGTACAAGCATACGCTATTGCC
CAACCCTCCAAACGTTTATCCTTGAAGGTCCTCAAAGCAAAGACAGAGAC
GAACAACTGGATGTATGCCCCAGGCAACAACACTAGCCTTGTAGATGCAG
TATTGAAAGTTGTGGGCACCGAAGTCGCCTCTAGCTGTCTGGTCAAGGTC
TGGCCATCTGAGAATGACAGCGACAGGCCATTTCGGATACTCGCGTTCCT
TCCAAAGCCAGAATCCGGTATGTAGCTGCTCTGTGAGACCCTGAGTGCGA
CTGACAGTGTCAGACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAG
TATTGATGGCAGGCCCTTATCGACCACCCGAGGGATCGCGCAAGATATTG
CGAAACTATATAAGTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCA
GCTATAAACATTACAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAA
TGCAAGCTACGACGTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTG
AAGATCGGGAAGAGCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTG
TACGGCGTTCAAGCAAAATCAACAGAGAGACCGAGAAATATCGATAAAGG
GAAAGAGCCCGCTTCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTA
AAAGTCCGGATGAATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACA
CCACGGACTCCGGATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCG
TCCGGAGACGAGAATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAA
GCAAGCAGATGCCGACGCGCGACAGTTCCTCATCGCGCAGTGACACTGAC
AAGATAGTGAGACATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAA
CTCACAGGAAACACTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTC
CCTCTATCAGCTCCACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTAC
GTGACTGAAGCTCAGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCC
TCTTCCGAGGACAAGGCAAACCTCGATGGACCATGACAGACATCCCGGAA
ACGGAGCCCTTGATGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAG
TCAACCACAGGCGAGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCA
GCAGTTGGCGCAAGAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACC
CAGGATCGACAGAGGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAA
TTTCAGGCTAGCTCTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTAC
TCCCTTGCTTGGGAGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCAC
CCGACCGTGGAAGGTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAAT
AACCACCAAGAGCTGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGA
GGCTATCCTTAAGCGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCT
CACCCCATCTAAGTCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCAC
CCAGATGCTGATCGGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGA
CCCACGGTCGTATTTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATG
GCATATCAAAGACCAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAAC
ATTCCAAATGGGTGTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGA
CATTTCGCTCATTTCAACCACATGCGACCATTTAACCAAGACAGATCTTT
ATACCGGATGCGGAGACCAGTGTGAAGCATTTAACCCGCCACATAAAGAT
ACAGAAACAATGCTTGATCTCTGGAGGAATCAACTGACGAGTTTGATACA
GCGCAATTACCGGACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGA
ATTTCTCTCGTTTAGCGCAGCGCGGGCATTCCAAGTGA back to topCoding sequence (CDS) from alignment at ch3:3158522..3161159- >KYF_003972-T1 ID=KYF_003972-T1|Name=KYF_003972-T1|organism=Aspergillus niger KYF3|type=CDS|length=7641bp|location=Sequence derived from alignment at ch3:3158522..3161159- (Aspergillus niger KYF3)
ACCTTACGAAACTGAACGGCTTGGGGCAGTATATCAGTATTGATGGCAGG
CCCTTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATATAA
GTCTTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCAGCTATAAACATTA
CAGATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAATGCAAGCTACGAC
GTCAACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGATCGGGAAGA
GCTTCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTGTACGGCGTTCAAG
CAAAATCAACAGAGAGACCGAGAAATATCGATAAAGGGAAAGAGCCCGCT
TCCTATCGAAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGATGA
ATCAAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACACCACGGACTCCGG
ATGTAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCCGGAGACGAGA
ATCGCGATTAGCAACCCCTGGTCAATATCTCAGCCAAGCAAGCAGATGCC
GACGCGCGACAGTTCCTCATCGCGCAGTGACACTGACAAGATAGTGAGAC
ATGAAATTGTGCGGTATCCGACTGAAAGCCGAAGAAACTCACAGGAAACA
CTGCAGACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTATCAGCTC
CACGACTGCTGCTGGCTCCACGACTGCTGCTGGCTACGTGACTGAAGCTC
AGTCTTCGCCGTCTAGTCCATGGACGCCTCGAACTCCTCTTCCGAGGACA
AGGCAAACCTCGATGGACCATGACAGACATCCCGGAAACGGAGCCCTTGA
TGGCTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAGTCAACCACAGGCG
AGGTGCCCACAGGAAATGGGGACGAGCGCTCATTGCAGCAGTTGGCGCAA
GAAAGATTCGGTTCACCAGAGAGGTCATCAGGCGACCCAGGATCGACAGA
GGATGGTGTTGTTACTACTCATAATCAGTCTCCCAAATTTCAGGCTAGCT
CTGCAGAAGCAGAAACGGAGCATGAAGGAGCTGGTACTCCCTTGCTTGGG
AGCGCTGCAGACTCCGAACTTCGGGAAAGCCACGCACCCGACCGTGGAAG
GTCCTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATAACCACCAAGAGC
TGGGACGTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCTATCCTTAAG
CGCCGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTCACCCCATCTAAG
TCGGTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAGATGCTGATC
GGGACGAGCCGACGAAGCCTGTGCTGGGTCCACATGACCCACGGTCGTAT
TTAATGCGTTACAAGGTGCAAGATCAGAACGAAGATGGCATATCAAAGAC
CAGAAGGATTAACACAGAGAAGCTGCCATTAGAAAACATTCCAAATGGGT
GTGAGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGACATTTCGCTCATT
TCAACCACATGCGACCATTTAACCAAGACAGATCTTTATACCGGATGCGG
AGACCAGTGTGAAGCATTTAACCCGCCACATAAAGATACAGAAACAATGC
TTGATCTCTGGAGGAATCAACTGACGAGTTTGATACAGCGCAATTACCGG
ACTTCAGAACGGTCGGGATTGCCGGATGTGCACTTGAATTTCTCTCGTTT
AGCGCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCACATCCGGTA
GGAACCAGTGTTCGCATAGCGGATTTGTTCAAACACATCCCAGTCCGGAG
ACAAACTACGTTAAAGAAAGCGGCCAAGACGGTCGTGAGGATCAAGAAGC
TCGTACAAGCATACGCTATTGCCCAACCCTCCAAACGTTTATCCTTGAAG
GTCCTCAAAGCAAAGACAGAGACGAACAACTGGATGTATGCCCCAGGCAA
CAACACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCACCGAAGTCG
CCTCTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGAATGACAGCGACAGG
CCATTTCGGATACTCGCGTTCCTTCCAAAGCCAGAATCCGATGCCAATCG
CAGCGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGCGTCTGTTATT
TCCGATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTTGGATGC
CGCAGCGACTTCGGTACTTATTGAGATCTCACAAAATACACTTGATGTAA
TACAAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGATCATCCTTTT
GTCTGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGATCTTAG
AACTATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTGCTAGTG
CGGCTGAGGTATCCCGTGGCGTGACTATCACCACTAGATTACAGCATGAG
CCGGTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGCTTCTAAGACC
TTACGAAACTGAACGGCTTGGGGCAGTATATCAGTATTGATGGCAGGCCC
TTATCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATATAAGTC
TTATATCCGCGTCGTTGCTTCCAGTAAGGAGGCAGCTATAAACATTACAG
ATCCGCTTCTGTGCCTTCACCTCCAGTGTACTAATGCAAGCTACGACGTC
AACATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGATCGGGAAGAGCT
TCTTTCTTTGGTAGAAGAGCTTTTGTGTGATGTGTACGGCGTTCAAGCAA
AATCAACAGAGAGACCGAGAAATATCGATAAAGGGAAAGAGCCCGCTTCC
TATCGAAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGATGAATC
AAGGGCTAGAAGCAGTTATGGCTCTTCCTCGACACCACGGACTCCGGATG
TAGAGGATCCAGACAGCTTCAATACTGAGAATCGTCCGGAGACGAGAATC
GCGATTAGCAACCCCTGGTCAATATCTCAGCCAAGCAAGCAGATGCCGAC
GCGCGACAGTTCCTCATCGCGCAGTGACACTGACAAGATAGTGAGACATG
AAATTGTGCGGTATCCGACTGAAAGCCGAAGAAACTCACAGGAAACACTG
CAGACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTATCAGCTCCAC
GACTGCTGCTGGCTCCACGACTGCTGCTGGCTACGTGACTGAAGCTCAGT
CTTCGCCGTCTAGTCCATGGACGCCTCGAACTCCTCTTCCGAGGACAAGG
CAAACCTCGATGGACCATGACAGACATCCCGGAAACGGAGCCCTTGATGG
CTGGTTGGGGAAAACTCCAGCCTCCTTGTCTCAGTCAACCACAGGCGAGG
TGCCCACAGGAAATGGGGACGAGCGCTCATTGCAGCAGTTGGCGCAAGAA
AGATTCGGTTCACCAGAGAGGTCATCAGGCGACCCAGGATCGACAGAGGA
TGGTGTTGTTACTACTCATAATCAGTCTCCCAAATTTCAGGCTAGCTCTG
CAGAAGCAGAAACGGAGCATGAAGGAGCTGGTACTCCCTTGCTTGGGAGC
GCTGCAGACTCCGAACTTCGGGAAAGCCACGCACCCGACCGTGGAAGGTC
CTCGGCTACTCTACGTCAGCTTCTTTCTGAGAATAACCACCAAGAGCTGG
GACGTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCTATCCTTAAGCGC
CGGGAACAACTCAAAAGCCAGCGAAACCCGAGCTCACCCCATCTAAGTCG
GTATCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAGATGCTGATCGGG
ACGAGCCGACGAAGCCTGTGCTGGGTCCACATGACCCACGGTCGTATTTA
ATGCGTTACAAGGTGCAAGATCAGAACGAAGATGGCATATCAAAGACCAG
AAGGATTAACACAGAGAAGCTGCCATTAGAAAACATTCCAAATGGGTGTG
AGTTGTACAGTCTGGCTCTGACCCAAGAGGCCGACATTTCGCTCATTTCA
ACCACATGCGACCATTTAACCAAGACAGATCTTTATACCGGATGCGGAGA
CCAGTGTGAAGCATTTAACCCGCCACATAAAGATACAGAAACAATGCTTG
ATCTCTGGAGGAATCAACTGACGAGTTTGATACAGCGCAATTACCGGACT
TCAGAACGGTCGGGATTGCCGGATGTGCACTTGAATTTCTCTCGTTTAGC
GCAGCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCACATCCGGTAGGA
ACCAGTGTTCGCATAGCGGATTTGTTCAAACACATCCCAGTCCGGAGACA
AACTACGTTAAAGAAAGCGGCCAAGACGGTCGTGAGGATCAAGAAGCTCG
TACAAGCATACGCTATTGCCCAACCCTCCAAACGTTTATCCTTGAAGGTC
CTCAAAGCAAAGACAGAGACGAACAACTGGATGTATGCCCCAGGCAACAA
CACTAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCACCGAAGTCGCCT
CTAGCTGTCTGGTCAAGGTCTGGCCATCTGAGAATGACAGCGACAGGCCA
TTTCGGATACTCGCGTTCCTTCCAAAGCCAGAATCCGATGCCAATCGCAG
CGCTCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGCGTCTGTTATTTCC
GATCCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTTGGATGCCGC
AGCGACTTCGGTACTTATTGAGATCTCACAAAATACACTTGATGTAATAC
AAGTGAAAGACAATGGCCATGGTATCCCCTCTACCGATCATCCTTTTGTC
TGCAAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGATCTTAGAAC
TATCGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTGCTAGTGCGG
CTGAGGTATCCCGTGGCGTGACTATCACCACTAGATTACAGCATGAGCCG
GTTGGTTCTTCTATCAGATACAGCAGAAATGGAGAGCTTCTAAGACCTTA
CGAAACTGAACGGCTTGGGGCAGTATATCAGTATTGATGGCAGGCCCTTA
TCGACCACCCGAGGGATCGCGCAAGATATTGCGAAACTATATAAGTCTTA
TATCCGCGTCGTTGCTTCCAGTAAGGAGGCAGCTATAAACATTACAGATC
CGCTTCTGTGCCTTCACCTCCAGTGTACTAATGCAAGCTACGACGTCAAC
ATTGAGCCCGCTAAAGATGATGTTCTTCTTGAAGATCGGGAAGAGCTTCT
TTCTTTGGTAGAAGAGCTTTTGTGTGATGTGTACGGCGTTCAAGCAAAAT
CAACAGAGAGACCGAGAAATATCGATAAAGGGAAAGAGCCCGCTTCCTAT
CGAAACTCATTCGAATTGCTTCTTGCCCGTAAAAGTCCGGATGAATCAAG
GGCTAGAAGCAGTTATGGCTCTTCCTCGACACCACGGACTCCGGATGTAG
AGGATCCAGACAGCTTCAATACTGAGAATCGTCCGGAGACGAGAATCGCG
ATTAGCAACCCCTGGTCAATATCTCAGCCAAGCAAGCAGATGCCGACGCG
CGACAGTTCCTCATCGCGCAGTGACACTGACAAGATAGTGAGACATGAAA
TTGTGCGGTATCCGACTGAAAGCCGAAGAAACTCACAGGAAACACTGCAG
ACATGCTCTCCAGGGTCTCTCCTACCGAGTCCCTCTATCAGCTCCACGAC
TGCTGCTGGCTCCACGACTGCTGCTGGCTACGTGACTGAAGCTCAGTCTT
CGCCGTCTAGTCCATGGACGCCTCGAACTCCTCTTCCGAGGACAAGGCAA
ACCTCGATGGACCATGACAGACATCCCGGAAACGGAGCCCTTGATGGCTG
GTTGGGGAAAACTCCAGCCTCCTTGTCTCAGTCAACCACAGGCGAGGTGC
CCACAGGAAATGGGGACGAGCGCTCATTGCAGCAGTTGGCGCAAGAAAGA
TTCGGTTCACCAGAGAGGTCATCAGGCGACCCAGGATCGACAGAGGATGG
TGTTGTTACTACTCATAATCAGTCTCCCAAATTTCAGGCTAGCTCTGCAG
AAGCAGAAACGGAGCATGAAGGAGCTGGTACTCCCTTGCTTGGGAGCGCT
GCAGACTCCGAACTTCGGGAAAGCCACGCACCCGACCGTGGAAGGTCCTC
GGCTACTCTACGTCAGCTTCTTTCTGAGAATAACCACCAAGAGCTGGGAC
GTGCACTCGACTTTGAGAACCGCAAGAGGGAGGCTATCCTTAAGCGCCGG
GAACAACTCAAAAGCCAGCGAAACCCGAGCTCACCCCATCTAAGTCGGTA
TCTAGCTGCCAAAGCCGCACTCCAGAAGCACCCAGATGCTGATCGGGACG
AGCCGACGAAGCCTGTGCTGGGTCCACATGACCCACGGTCGTATTTAATG
CGTTACAAGGTGCAAGATCAGAACGAAGATGGCATATCAAAGACCAGAAG
GATTAACACAGAGAAGCTGCCATTAGAAAACATTCCAAATGGGTGTGAGT
TGTACAGTCTGGCTCTGACCCAAGAGGCCGACATTTCGCTCATTTCAACC
ACATGCGACCATTTAACCAAGACAGATCTTTATACCGGATGCGGAGACCA
GTGTGAAGCATTTAACCCGCCACATAAAGATACAGAAACAATGCTTGATC
TCTGGAGGAATCAACTGACGAGTTTGATACAGCGCAATTACCGGACTTCA
GAACGGTCGGGATTGCCGGATGTGCACTTGAATTTCTCTCGTTTAGCGCA
GCGCGGGCATTCCAAGTGATACCCAGCGAGCGTCACATCCGGTAGGAACC
AGTGTTCGCATAGCGGATTTGTTCAAACACATCCCAGTCCGGAGACAAAC
TACGTTAAAGAAAGCGGCCAAGACGGTCGTGAGGATCAAGAAGCTCGTAC
AAGCATACGCTATTGCCCAACCCTCCAAACGTTTATCCTTGAAGGTCCTC
AAAGCAAAGACAGAGACGAACAACTGGATGTATGCCCCAGGCAACAACAC
TAGCCTTGTAGATGCAGTATTGAAAGTTGTGGGCACCGAAGTCGCCTCTA
GCTGTCTGGTCAAGGTCTGGCCATCTGAGAATGACAGCGACAGGCCATTT
CGGATACTCGCGTTCCTTCCAAAGCCAGAATCCGATGCCAATCGCAGCGC
TCCCCCTAGCGGCGGTGCGGGCAATTGGCTCCGCGTCTGTTATTTCCGAT
CCTTGCTCCATTGTCAAGGAGCTCCTGGACAACGCCTTGGATGCCGCAGC
GACTTCGGTACTTATTGAGATCTCACAAAATACACTTGATGTAATACAAG
TGAAAGACAATGGCCATGGTATCCCCTCTACCGATCATCCTTTTGTCTGC
AAACGCACCTTCACTAGCAAAATTCAATCCGTCGAAGATCTTAGAACTAT
CGGCGGAAAGTCTCTAGGTTTTAGAGGCGAAGCACTTGCTAGTGCGGCTG
AGGTATCCCGTGGCGTGACTATCACCACTAGATTACAGCATGAGCCGGTT
GGTTCTTCTATCAGATACAGCAGAAATGGAGAGCTTCTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006298 | mismatch repair |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0030983 | mismatched DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR020568 |
| DBxref | InterPro:IPR014762 |
| DBxref | InterPro:IPR036890 |
| DBxref | InterPro:IPR014721 |
| DBxref | InterPro:IPR013507 |
| DBxref | PFAM:PF13589 |
| DBxref | PFAM:PF02518 |
| DBxref | PFAM:PF01119 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3158522..3161159 - |
|
