You are here

Home

KYF_004005-T1, KYF_004005-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004005-T1
Unique NameKYF_004005-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3247079..3248757+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004005-T1 ID=KYF_004005-T1|Name=KYF_004005-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1679bp|location=Sequence derived from alignment at ch3:3247079..3248757+ (Aspergillus niger KYF3)
ATGTCGGGAAATGACGTACCTTCTTACGATGAGTTTGCCGTGGGCTGGAT
CTGTGCCCTACCACTGGAGATGACCGCAGCTAAAGCCGTCCTCGACGAAG
AATATCCAAGTCTACATTTACCTAAGCAGCATCACAACACCTACGTGCTT
GGAAGGATTTCCGGACATAAAGTGGTGATTACATGTCTTCCATTCGGGAT
TTACGGAACTACGTCGGCGACTGCGGTAGTTGAGCAGATGCTATTCACCT
TTCGGTCCATCCGCTTTGGCCTCATGGTCGGGATTGGCGGAGGAGTCCCG
TCTGCTGTCGATGTCAGACTGGGAGATGTGGTCGTAAGTAAGCCGACTGC
TGGCCTTCCCGGAGTGATCCAGTACGATTATGGCAAGACCGTTGCTTCAG
GTCGCTTTGAGCAGACCGGGACACTCAACAAGCCGCCGATAGTTCTCCTA
TCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTGGCTGGAGGCAGCGACAT
TGGTACCTATGAGAAGATTATCGCGGATTCTCTAAGGGCTGCCAAAGATC
CATCCGTGTTTCGGTATCCGGGTGCCGAACATGATTGGCTCTTCGATGCC
TCCTATGACCATGATCCTCGCTTCGCATCCTGTGCTGAGTGTGACCCAGA
ACGACGGGTGAGACGCAAGCCTCGACGCTCATGCACACCGGTCGTACATT
ATGGCAACATTGCGTCGGGCAATCAAGTCATGAAGCATGGCCTCACGCGC
GATCGCATTGCGCAGACAACACAGGGGATCTTGTGTTTTGAAATGGAGGC
GGCGGGGATCATGGATTACCTTCCGTGCCTCGTGATCAGAGGGATTTGTG
ACTATTCTGACTCCCACAAGAAGAAAGAGTGGCAGGGGTTCGCGGCTTTG
ACAGCCGCGGCCTATGCGAAATTGCTATTGTCGAAGATTCCTGTCCATCG
GAGTGAGGCGTCTACGCTGATACAGGCACCTGGTTCGAAGAATAGTAGTA
CGTGGGGCCCAAGCATGGTGTACTTTATACCCAGAGAGCTATTACTGATG
TTAATGAAGGCGATTCGTTCGATGTTCGCTTCGACACAATCGAAATGCCA
CAGGCTGCCATTTCTGTGGGCCGGGAGGCAGAGCTTGCAATGATAACGAA
GAGTCTTCTATCAGACAGATTTCGAGGCATTGTCACCCTATATGGAATGG
GTGGAATTGGGAAAACCGAACTCTCGATTATGTACATCATGCGCCATCGG
CAAAAGTATTCATCTGTCTTCTGGATTGATGGTAGCAGTCTTGACAAGTT
ATATTCCAGCTATACACAAGCGGCAATGCGGATCATACATGATCATCCAG
GTGACCAGTCTTTGAGAAAGGCCTTGAAGGAAGGTGATCAGATTCAATTG
GTTGGATCAGTCAATGAGTGGCTGAGTCGCCCTTCAAACAATCGGTGGTT
ACTCATATACGATGGCTTCGACCTTCCTATGGTCGAAGGTTTTGACAAAG
CCGAAATCATGAAAATGAGACTGCCTCCAAGCAAGCAGGGTCATATCATT
ATTACAATGAGAAGTTATGATATTGGAATAGGTGATCAGATTCAAGTAAG
AAAGCTGGCAGCAATTGATGACGGCCTCGATCTTCTGACTCATGTGTGCG
GACGACGGAATCTACGAGATGGCAAGTAA
back to top

Coding sequence (CDS) from alignment at ch3:3247079..3248757+

>KYF_004005-T1 ID=KYF_004005-T1|Name=KYF_004005-T1|organism=Aspergillus niger KYF3|type=CDS|length=3234bp|location=Sequence derived from alignment at ch3:3247079..3248757+ (Aspergillus niger KYF3)
ATGTCGGGAAATGACGTACCTTCTTACGATGAGTTTGCCGTGGGCTGGAT
CTGTGCCCTACCACTGGAGATGACCGCAGCTAAAGCCGTCCTCGACGAAG
AATATCCAAGTCTACATTTACCTAAGCAGCATCACAACACCTACGTGCTT
GGAAGGATTTCCGGACATAAAGTGGTGATTACATGTCTTCCATTCGGGAT
TTACGGAACTACGTCGGCGACTGCGGTAGTTGAGCAGATGCTATTCACCT
TTCGGTCCATCCGCTTTGGCCTCATGGTCGGGATTGGCGGAGGAGTCCCG
TCTGCTGTCGATGTCAGACTGGGAGATGTGGTCGTAAGTAAGCCGACTGC
TGGCCTTCCCGGAGTGATCCAGTACGATTATGGCAAGACCGTTGCTTCAG
GTCGCTTTGAGCAGACCGGGACACTCAACAAGCCGCCGATAGTTCTCCTA
TCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTGGCTGGAGGCAGCGACAT
TGGTACCTATGAGAAGATTATCGCGGATTCTCTAAGGGCTGCCAAAGATC
CATCCGTGTTTCGGTATCCGGGTGCCGAACATGATTGGCTCTTCGATGCC
TCCTATGACCATGATCCTCGCTTCGCATCCTGTGCTGAGTGTGACCCAGA
ACGACGGGTGAGACGCAAGCCTCGACGCTCATGCACACCGGTCGTACATT
ATGGCAACATTGCGTCGGGCAATCAAGTCATGAAGCATGGCCTCACGCGC
GATCGCATTGCGCAGACAACACAGGGGATCTTGTGTTTTGAAATGGAGGC
GGCGGGGATCATGGATTACCTTCCGTGCCTCGTGATCAGAGGGATTTGTG
ACTATTCTGACTCCCACAAGAAGAAAGAGTGGCAGGGGTTCGCGGCTTTG
ACAGCCGCGGCCTATGCGAAATTGCTATTGTCGAAGATTCCTGTCCATCG
GAGTGAGGCGTCTACGCTGATACAGGCACCTGGTTCGAAGAATAGTAGCG
ATTCGTTCGATGTTCGCTTCGACACAATCGAAATGCCACAGGCTGCCATT
TCTGTGGGCCGGGAGGCAGAGCTTGCAATGATAACGAAGAGTCTTCTATC
AGACAGATTTCGAGGCATTGTCACCCTATATGGAATGGGTGGAATTGGGA
AAACCGAACTCTCGATTATGTACATCATGCGCCATCGGCAAAAGTATTCA
TCTGTCTTCTGGATTGATGGTAGCAGTCTTGACAAGTTATATTCCAGCTA
TACACAAGCGGCAATGCGGATCATACATGATCATCCAGGTGACCAGTCTT
TGAGAAAGGCCTTGAAGGAAGGTGATCAGATTCAATTGGTTGGATCAGTC
AATGAGTGGCTGAGTCGCCCTTCAAACAATCGGTGGTTACTCATATACGA
TGGCTTCGACCTTCCTATGGTCGAAGGTTTTGACAAAGCCGAAATCATGA
AAATGAGACTGCCTCCAAGCAAGCAGGGTCATATCATTATTACAATGAGA
AGTTATGATATTGGAATAGGTGATCAGATTCAAGTAAGAAAGCTGGCAGC
AATTGATGACGGCCTCGATCTTCTGACTCATGTGTGCGGACGACGGAATC
TACGAGATGGCAAGTAAATGTCGGGAAATGACGTACCTTCTTACGATGAG
TTTGCCGTGGGCTGGATCTGTGCCCTACCACTGGAGATGACCGCAGCTAA
AGCCGTCCTCGACGAAGAATATCCAAGTCTACATTTACCTAAGCAGCATC
ACAACACCTACGTGCTTGGAAGGATTTCCGGACATAAAGTGGTGATTACA
TGTCTTCCATTCGGGATTTACGGAACTACGTCGGCGACTGCGGTAGTTGA
GCAGATGCTATTCACCTTTCGGTCCATCCGCTTTGGCCTCATGGTCGGGA
TTGGCGGAGGAGTCCCGTCTGCTGTCGATGTCAGACTGGGAGATGTGGTC
GTAAGTAAGCCGACTGCTGGCCTTCCCGGAGTGATCCAGTACGATTATGG
CAAGACCGTTGCTTCAGGTCGCTTTGAGCAGACCGGGACACTCAACAAGC
CGCCGATAGTTCTCCTATCAGCGTTGTCGTCGCTGGAAGCAGATCGTCTG
GCTGGAGGCAGCGACATTGGTACCTATGAGAAGATTATCGCGGATTCTCT
AAGGGCTGCCAAAGATCCATCCGTGTTTCGGTATCCGGGTGCCGAACATG
ATTGGCTCTTCGATGCCTCCTATGACCATGATCCTCGCTTCGCATCCTGT
GCTGAGTGTGACCCAGAACGACGGGTGAGACGCAAGCCTCGACGCTCATG
CACACCGGTCGTACATTATGGCAACATTGCGTCGGGCAATCAAGTCATGA
AGCATGGCCTCACGCGCGATCGCATTGCGCAGACAACACAGGGGATCTTG
TGTTTTGAAATGGAGGCGGCGGGGATCATGGATTACCTTCCGTGCCTCGT
GATCAGAGGGATTTGTGACTATTCTGACTCCCACAAGAAGAAAGAGTGGC
AGGGGTTCGCGGCTTTGACAGCCGCGGCCTATGCGAAATTGCTATTGTCG
AAGATTCCTGTCCATCGGAGTGAGGCGTCTACGCTGATACAGGCACCTGG
TTCGAAGAATAGTAGCGATTCGTTCGATGTTCGCTTCGACACAATCGAAA
TGCCACAGGCTGCCATTTCTGTGGGCCGGGAGGCAGAGCTTGCAATGATA
ACGAAGAGTCTTCTATCAGACAGATTTCGAGGCATTGTCACCCTATATGG
AATGGGTGGAATTGGGAAAACCGAACTCTCGATTATGTACATCATGCGCC
ATCGGCAAAAGTATTCATCTGTCTTCTGGATTGATGGTAGCAGTCTTGAC
AAGTTATATTCCAGCTATACACAAGCGGCAATGCGGATCATACATGATCA
TCCAGGTGACCAGTCTTTGAGAAAGGCCTTGAAGGAAGGTGATCAGATTC
AATTGGTTGGATCAGTCAATGAGTGGCTGAGTCGCCCTTCAAACAATCGG
TGGTTACTCATATACGATGGCTTCGACCTTCCTATGGTCGAAGGTTTTGA
CAAAGCCGAAATCATGAAAATGAGACTGCCTCCAAGCAAGCAGGGTCATA
TCATTATTACAATGAGAAGTTATGATATTGGAATAGGTGATCAGATTCAA
GTAAGAAAGCTGGCAGCAATTGATGACGGCCTCGATCTTCTGACTCATGT
GTGCGGACGACGGAATCTACGAGATGGCAAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0043531ADP binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004005KYF_004005Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004005-T1.exon1KYF_004005-T1.exon1Aspergillus niger KYF3exon
KYF_004005-T1.exon2KYF_004005-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004005-T1.cdsKYF_004005-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004005-T1KYF_004005-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.8
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR035994
DBxrefInterPro:IPR002182
DBxrefInterPro:IPR000845
DBxrefPFAM:PF01048
DBxrefPFAM:PF00931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3247079..3248757 +
Powered by Drupal