|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3630602..3631686- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004132-T1 ID=KYF_004132-T1|Name=KYF_004132-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1085bp|location=Sequence derived from alignment at ch3:3630602..3631686- (Aspergillus niger KYF3)
ATGCAGGCTGCCCAGCAGTCCTGGGGTACGTCCATCCCCAACCCCATCCC
CACCCCCACTCCATCTCACAGCACTCTAACCCCATAACCACAGAATTCGA
AAATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTACAAATACG
ATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTCCAAAGAC
CCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCCTCAAGAT
GGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGCCTAATGC
AAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTTCCGACTT
CCCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAGCCAACGA
ATACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGGATGGAAA
ATGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTGGTTATCG
GGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGACCGTTTGT
GGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAGGTGGATA
TTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAAAGGGGAG
GGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGTTGAACAA
GGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTGGAGGTGT
CGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCTGTGGAAT
AAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGACGAGGGA
TTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAGCGGGCCA
CGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCAAGTTAAG
GATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTGTCTCGGA
AGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTGTTTCAAA
ATGTTGGGGAGGGGAATAGATCGGAGAAATCATGA back to topCoding sequence (CDS) from alignment at ch3:3630602..3631686- >KYF_004132-T1 ID=KYF_004132-T1|Name=KYF_004132-T1|organism=Aspergillus niger KYF3|type=CDS|length=2034bp|location=Sequence derived from alignment at ch3:3630602..3631686- (Aspergillus niger KYF3)
AATTCGAAAATGCCGTCACCCTCATAGACCCCCACCGAGACGCGCTCTAC
AAATACGATGAAGAGACACACAAAGCTCTTAGCGCTCAGCGCCCTTGGTC
CAAAGACCCACACTACTTCAAATCGATCCGAATCTCCGCCGTCGCACTCC
TCAAGATGGTAATGCACGCGCGGTCCGGCGGCTCCCTCGAAGTAATGGGC
CTAATGCAAGGCTATGTCCTGCCCGAAACCTTCGTGGTAACCGACGCCTT
CCGACTTCCCGTAGAGGGAACCGAAACGCGAGTCAACGCCCAAGACGAAG
CCAACGAATACATGGTCTCATACCTACAGTCGTGCCGGGATGCAGGACGG
ATGGAAAATGCAGTGGGCTGGTACCACAGTCATCCCGGGTACGGGTGCTG
GTTATCGGGCATTGATGTGACGACGCAGGATATGCAGCAGCTCGGGGGAC
CGTTTGTGGCGGTGGTGGTTGATCCAGAGAGGACGATCTCAGCAGGGAAG
GTGGATATTGGGGCATTTAGGACGTTTCCGAAGGATTATACGCCGCCGAA
AGGGGAGGGGGGTAGTGGTGCTGGGGAGGATGACTATCAGACGGTGCCGT
TGAACAAGGCGGAGGACTTTGGGGCACATGCGTCACATTATTATTCGCTG
GAGGTGTCGGTGTTTAAGAGTGCGTTGGATACGGAGATTCTGTCGTTGCT
GTGGAATAAGTATTGGGTTGCGACGTTGAGTCAGAGTCCGTTGTTTACGA
CGAGGGATTATGGGAGTAAGCAGATGGTGGATTTGAGTCAGAAGATTAAG
CGGGCCACGAGGGGCGTGGAGAGTAGTGCTTCGCGAGGGAATCTGGCGCA
AGTTAAGGATCCGCAGTTGGAGAGGGTGGCGAGGGATGGGCAGCGGATTG
TCTCGGAAGAAGTGAAGGGTTTGTTGGCGGCGGAAGTGAAGATGAAGCTG
TTTCAAAATGTTGGGGAGGGGAATAGATCGGAGAAATCATGAATGCAGGC
TGCCCAGCAGTCCTGGGAATTCGAAAATGCCGTCACCCTCATAGACCCCC
ACCGAGACGCGCTCTACAAATACGATGAAGAGACACACAAAGCTCTTAGC
GCTCAGCGCCCTTGGTCCAAAGACCCACACTACTTCAAATCGATCCGAAT
CTCCGCCGTCGCACTCCTCAAGATGGTAATGCACGCGCGGTCCGGCGGCT
CCCTCGAAGTAATGGGCCTAATGCAAGGCTATGTCCTGCCCGAAACCTTC
GTGGTAACCGACGCCTTCCGACTTCCCGTAGAGGGAACCGAAACGCGAGT
CAACGCCCAAGACGAAGCCAACGAATACATGGTCTCATACCTACAGTCGT
GCCGGGATGCAGGACGGATGGAAAATGCAGTGGGCTGGTACCACAGTCAT
CCCGGGTACGGGTGCTGGTTATCGGGCATTGATGTGACGACGCAGGATAT
GCAGCAGCTCGGGGGACCGTTTGTGGCGGTGGTGGTTGATCCAGAGAGGA
CGATCTCAGCAGGGAAGGTGGATATTGGGGCATTTAGGACGTTTCCGAAG
GATTATACGCCGCCGAAAGGGGAGGGGGGTAGTGGTGCTGGGGAGGATGA
CTATCAGACGGTGCCGTTGAACAAGGCGGAGGACTTTGGGGCACATGCGT
CACATTATTATTCGCTGGAGGTGTCGGTGTTTAAGAGTGCGTTGGATACG
GAGATTCTGTCGTTGCTGTGGAATAAGTATTGGGTTGCGACGTTGAGTCA
GAGTCCGTTGTTTACGACGAGGGATTATGGGAGTAAGCAGATGGTGGATT
TGAGTCAGAAGATTAAGCGGGCCACGAGGGGCGTGGAGAGTAGTGCTTCG
CGAGGGAATCTGGCGCAAGTTAAGGATCCGCAGTTGGAGAGGGTGGCGAG
GGATGGGCAGCGGATTGTCTCGGAAGAAGTGAAGGGTTTGTTGGCGGCGG
AAGTGAAGATGAAGCTGTTTCAAAATGTTGGGGAGGGGAATAGATCGGAG
AAATCATGAATGCAGGCTGCCCAGCAGTCCTGGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263RDD |
| Note | MEROPS:MER0122119 |
| DBxref | InterPro:IPR037518 |
| DBxref | InterPro:IPR040961 |
| DBxref | InterPro:IPR000555 |
| DBxref | PFAM:PF01398 |
| DBxref | PFAM:PF18323 |
| Product | proteasome regulatory particle subunit RPN11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3630602..3631686 - |
|
