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KYF_004379-T1, KYF_004379-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004379-T1
Unique NameKYF_004379-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:334127..334744+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004379-T1 ID=KYF_004379-T1|Name=KYF_004379-T1|organism=Aspergillus niger KYF3|type=mRNA|length=618bp|location=Sequence derived from alignment at ch4:334127..334744+ (Aspergillus niger KYF3)
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTGTACGTTTTGACT
TGCTCTGAAATGGCTAATGTGTATCTAACACACTTGTGCGCAGTTGACTT
CGAGTCGTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTG
GCGAGCCCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTG
ACTGGGTTTATCGGTGTGGGACAGCTCCGATACAGTATGTGAAGCAGGAT
GGAGTTTATTGGGTTGATACTGATGATGGCTACAGTCCTGACGAATCTCG
GTGAGAAGATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGAC
ACCAGCTCCGGCGAGATCAACTACACCGGTATGTTACACCAACTGAAAGT
TCACCATGCCTTTGTGTTGGGTCAGGCTAACAGCAGCAGACCTCGTCCGC
ACCATCCTGGCCAACTAA
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Coding sequence (CDS) from alignment at ch4:334127..334744+

>KYF_004379-T1 ID=KYF_004379-T1|Name=KYF_004379-T1|organism=Aspergillus niger KYF3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch4:334127..334744+ (Aspergillus niger KYF3)
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGCT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGCT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGCT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
ATGTCTCGCTCACCAGATATGCACCATGACCAGGCCTCGACCAACTACAA
GGAAGCCTTCTCTCTCTTCGATAAGCGTGGTACCGGCAAGGTCGCGCTCG
AGTCGCTAGGCGACCTCCTGCGCGCATGCGGTCAGAATCCTACTTTGGCG
GAGATCGCAGATTTGGAGAAGTCCATCGGTGGAGACTTTGACTTCGAGTC
GTTCTTGAAGGTCCTCAACCGCCCTGGAGGCTTCCGTGACCCTGGCGAGC
CCGAAGAATACTGCCGCGGATTCCAGGTGTTCGACAAGGACCTGACTGGG
TTTATCGGTGTGGGACAGCTCCGATACATCCTGACGAATCTCGGTGAGAA
GATGTCGGATGAGGAGGTTGACGAGCTACTCAAGGCCGTCGACACCAGCT
CCGGCGAGATCAACTACACCGACCTCGTCCGCACCATCCTGGCCAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC4KYF_004379Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004379-T1.exon1KYF_004379-T1.exon1Aspergillus niger KYF3exon
KYF_004379-T1.exon2KYF_004379-T1.exon2Aspergillus niger KYF3exon
KYF_004379-T1.exon3KYF_004379-T1.exon3Aspergillus niger KYF3exon
KYF_004379-T1.exon4KYF_004379-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004379-T1.cdsKYF_004379-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004379-T1KYF_004379-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265591
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR002048
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
ProductSCF ubiquitin ligase complex subunit cdc4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:334127..334744 +
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