|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:827723..829217+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004541-T1 ID=KYF_004541-T1|Name=KYF_004541-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1495bp|location=Sequence derived from alignment at ch4:827723..829217+ (Aspergillus niger KYF3)
ATGTCTATGTCAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCGCGTCCAC
GTCGACTTCGGCGTCGTCGATGACCAAGGCTGCGGGCGATATCTCCAGCG
TCTTCCCCAGTTTGAGACCAGACTACAAGCCAGAGCCACTGCCCCCGCGG
TTCAGGGATCTGAAGCTGAAATACTTTGAAAAGAATGAAAAGGCTCTGAA
GCAAAGCTGGGAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTGCACAAGA
TCAAGGCCAAAGGAAGCGATGTAAATTTCCATGGCATCTTCTATATGCAT
TGAGTGACACTAACAAAATGCCCAGATCATTCCATCGGTGCAATATTCCG
ACGTGGTCAATGGAACCGTCCCAGACCATCTCCTTGCAGAGATCCGTCAC
AGAGGTTCCGTGGTCATCAGGAACGTGATGCCTCGAGAGAAAGCCCTCGA
CTGGAAGGAGAGGATCAAGGACTATGCTGCTGCCAATCAAGAGCGCGTGA
AGGCCTTTCCTCCCGACTCCCCAGCGGTCTATGAGCTGTACTGGACTCCA
TCTCAAGCAGAGGCCCGAGCACATCCGAACATGCTCGGAACCCAGCGCTT
CCTGCAGCGTCTCTGGCACTCGTCCGATCCCAACACCCCCATCTCGACCC
GGAACCCCTTGACCTACGCAGACCGACTCCGTATCAGGCAGCCGGGTGAC
GCAAAGTTCACTCTTGGCCCTCACATCGACGGTGGATCATTGGAGCGCTG
GGAGGATCCTGAATACTCCCGGGTCTATACCAAGATTCTAGAGGGCAAAT
GGGAAGAGTACGACCCATGGGACGCCAAGCACCGTGTCTCGGCCAATATG
GACTTATACAATGGCGCCGGTTCCTGCTCCATGCTGAGATTCTTCCAAGG
ATGGCTGTCCATGTCCAACACAGCTCCTGGCGAAGGCTCACTGCATGTGT
GCCCCATGCTCATCCAGAGTACCGCCTACACTATCCTCCGACCTTTCTTC
GACCCAGTGTCCTCGCAGCCGGTGCTGGACAACACATTCCCCGGTGCCGT
ACCCGGAACGTGTCAAGAGTACAACCCCGTAACACATCCTCACCTGGATC
TCGAAACTACCATGGTGTCCGTCCCCGAGGTAGAACCGGGTGACTACGTT
GCCTGGCACTGTGATTCCTTGCACTCCGTTGACAAGGAACATCGCGGCAA
GGGAGACTCCAGCGTTCTCTACATCCCTGCCACGCCTATGTGCGAAATGA
ACGTGGACTACCTGCTCAAGCAGCGCCAGGCTGCGCTTGCTTACTCTCCG
CCCTGGGATTTCCCGGGCGCTGGTGGACCCGGTGAGATCGGTTTCCAGGG
AGCACTTGACTGGAGCTCTGTTGATGCAGAAGGCCTGCGCGCCATGGGTA
TGGGAAGTCAGCCATGGGAGATTACCGACGACATGAGCGAGGGAGAGAAG
GCGGTTGTCAGAGCTGCCAACAAGACCTGCTTCGGGCAAGCATGA back to topCoding sequence (CDS) from alignment at ch4:827723..829217+ >KYF_004541-T1 ID=KYF_004541-T1|Name=KYF_004541-T1|organism=Aspergillus niger KYF3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch4:827723..829217+ (Aspergillus niger KYF3)
ATGTCTATGTCAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCGCGTCCAC
GTCGACTTCGGCGTCGTCGATGACCAAGGCTGCGGGCGATATCTCCAGCG
TCTTCCCCAGTTTGAGACCAGACTACAAGCCAGAGCCACTGCCCCCGCGG
TTCAGGGATCTGAAGCTGAAATACTTTGAAAAGAATGAAAAGGCTCTGAA
GCAAAGCTGGGAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTGCACAAGA
TCAAGGCCAAAGGAAGCGATATCATTCCATCGGTGCAATATTCCGACGTG
GTCAATGGAACCGTCCCAGACCATCTCCTTGCAGAGATCCGTCACAGAGG
TTCCGTGGTCATCAGGAACGTGATGCCTCGAGAGAAAGCCCTCGACTGGA
AGGAGAGGATCAAGGACTATGCTGCTGCCAATCAAGAGCGCGTGAAGGCC
TTTCCTCCCGACTCCCCAGCGGTCTATGAGCTGTACTGGACTCCATCTCA
AGCAGAGGCCCGAGCACATCCGAACATGCTCGGAACCCAGCGCTTCCTGC
AGCGTCTCTGGCACTCGTCCGATCCCAACACCCCCATCTCGACCCGGAAC
CCCTTGACCTACGCAGACCGACTCCGTATCAGGCAGCCGGGTGACGCAAA
GTTCACTCTTGGCCCTCACATCGACGGTGGATCATTGGAGCGCTGGGAGG
ATCCTGAATACTCCCGGGTCTATACCAAGATTCTAGAGGGCAAATGGGAA
GAGTACGACCCATGGGACGCCAAGCACCGTGTCTCGGCCAATATGGACTT
ATACAATGGCGCCGGTTCCTGCTCCATGCTGAGATTCTTCCAAGGATGGC
TGTCCATGTCCAACACAGCTCCTGGCGAAGGCTCACTGCATGTGTGCCCC
ATGCTCATCCAGAGTACCGCCTACACTATCCTCCGACCTTTCTTCGACCC
AGTGTCCTCGCAGCCGGTGCTGGACAACACATTCCCCGGTGCCGTACCCG
GAACGTGTCAAGAGTACAACCCCGTAACACATCCTCACCTGGATCTCGAA
ACTACCATGGTGTCCGTCCCCGAGGTAGAACCGGGTGACTACGTTGCCTG
GCACTGTGATTCCTTGCACTCCGTTGACAAGGAACATCGCGGCAAGGGAG
ACTCCAGCGTTCTCTACATCCCTGCCACGCCTATGTGCGAAATGAACGTG
GACTACCTGCTCAAGCAGCGCCAGGCTGCGCTTGCTTACTCTCCGCCCTG
GGATTTCCCGGGCGCTGGTGGACCCGGTGAGATCGGTTTCCAGGGAGCAC
TTGACTGGAGCTCTGTTGATGCAGAAGGCCTGCGCGCCATGGGTATGGGA
AGTCAGCCATGGGAGATTACCGACGACATGAGCGAGGGAGAGAAGGCGGT
TGTCAGAGCTGCCAACAAGACCTGCTTCGGGCAAGCATGAATGTCTATGT
CAAAGTTTCTTTCAAAAACGGCCGCCCGCGCCGCGTCCACGTCGACTTCG
GCGTCGTCGATGACCAAGGCTGCGGGCGATATCTCCAGCGTCTTCCCCAG
TTTGAGACCAGACTACAAGCCAGAGCCACTGCCCCCGCGGTTCAGGGATC
TGAAGCTGAAATACTTTGAAAAGAATGAAAAGGCTCTGAAGCAAAGCTGG
GAGCGACTCCTCCCTAGCTTGGAGGAGGAAGTGCACAAGATCAAGGCCAA
AGGAAGCGATATCATTCCATCGGTGCAATATTCCGACGTGGTCAATGGAA
CCGTCCCAGACCATCTCCTTGCAGAGATCCGTCACAGAGGTTCCGTGGTC
ATCAGGAACGTGATGCCTCGAGAGAAAGCCCTCGACTGGAAGGAGAGGAT
CAAGGACTATGCTGCTGCCAATCAAGAGCGCGTGAAGGCCTTTCCTCCCG
ACTCCCCAGCGGTCTATGAGCTGTACTGGACTCCATCTCAAGCAGAGGCC
CGAGCACATCCGAACATGCTCGGAACCCAGCGCTTCCTGCAGCGTCTCTG
GCACTCGTCCGATCCCAACACCCCCATCTCGACCCGGAACCCCTTGACCT
ACGCAGACCGACTCCGTATCAGGCAGCCGGGTGACGCAAAGTTCACTCTT
GGCCCTCACATCGACGGTGGATCATTGGAGCGCTGGGAGGATCCTGAATA
CTCCCGGGTCTATACCAAGATTCTAGAGGGCAAATGGGAAGAGTACGACC
CATGGGACGCCAAGCACCGTGTCTCGGCCAATATGGACTTATACAATGGC
GCCGGTTCCTGCTCCATGCTGAGATTCTTCCAAGGATGGCTGTCCATGTC
CAACACAGCTCCTGGCGAAGGCTCACTGCATGTGTGCCCCATGCTCATCC
AGAGTACCGCCTACACTATCCTCCGACCTTTCTTCGACCCAGTGTCCTCG
CAGCCGGTGCTGGACAACACATTCCCCGGTGCCGTACCCGGAACGTGTCA
AGAGTACAACCCCGTAACACATCCTCACCTGGATCTCGAAACTACCATGG
TGTCCGTCCCCGAGGTAGAACCGGGTGACTACGTTGCCTGGCACTGTGAT
TCCTTGCACTCCGTTGACAAGGAACATCGCGGCAAGGGAGACTCCAGCGT
TCTCTACATCCCTGCCACGCCTATGTGCGAAATGAACGTGGACTACCTGC
TCAAGCAGCGCCAGGCTGCGCTTGCTTACTCTCCGCCCTGGGATTTCCCG
GGCGCTGGTGGACCCGGTGAGATCGGTTTCCAGGGAGCACTTGACTGGAG
CTCTGTTGATGCAGAAGGCCTGCGCGCCATGGGTATGGGAAGTCAGCCAT
GGGAGATTACCGACGACATGAGCGAGGGAGAGAAGGCGGTTGTCAGAGCT
GCCAACAAGACCTGCTTCGGGCAAGCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR027443 |
| DBxref | InterPro:IPR010856 |
| DBxref | PFAM:PF07350 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:827723..829217 + |
|
