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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1115462..1116730- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004622-T1 ID=KYF_004622-T1|Name=KYF_004622-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1269bp|location=Sequence derived from alignment at ch4:1115462..1116730- (Aspergillus niger KYF3)
ATGAAAGGCCTCCCGTCACTGCTGAACAGCAGCAGCACCAAAAAATGGAC
ACAATCCACCCCATCCACAGGCGAGGGTGAGAATGAGAGTGGTAGTACTA
TATCACCCACCAAGCCGCCCGAGCCATCCACACCCCCAGGAGGCTCAAAC
ACCTCCATGATCTGGACGCGGAAGAAGATAATATGGCTCATCACCCTGAT
AGCTCTAAGCGTAGCCATAATCGTGGTGGTGATAACCGTCCCAGTAGTTC
TCCTGCTGGACGATAAACACAACGACGATCCCAGCTACTACAATAGCGCC
AACCGTCCAGTCCGCGTCGTGCATGACTTCCCCGACCCGGGTCTAATCCA
GGTGAACAGCACGTGGTATGCATACGCTACAGTCGCCACACCGGACAATC
CTGACGTCCCTCACGTCCCGGTATCGACATCGCGGAACTTTAGCAGCTGG
ACCTGGTTGCAGGGATACGATGTCATGCCTGCAATTAGCAGTTGGGAAAC
GAATATGAACCAGTACGCTCCGGACGTGATTCAACGCGTAAGTACCAGCC
CAGCCATCAAGCATAACCAAATCAACTAAATACCCTTATAGAAAGACGGC
CACTTCGTCCTCTACTACTCAGGCGAACTAAAAGACTGGCTCCGCCACCA
CTGCGTCGGCGCCGCTGTCTCCAACGGCACAAGTCCCCTAGGACCATACA
TCCCCCACAACACCACCCTCGCCTGTCCCCGCGACCACGGCGGTGCCATC
GACCCCGCCCCCTTCAGAGACGTCAACGGGACCCTCTACGTCGTGTACAA
AATCGACGGCAACAGCATCGGCCACGGCGGAGGCTGCAACAACGGCAAGA
AACCCATCGTTTCCACGCCCATCATGCTCCAACAACTCAAAGACGATGGA
GTCACCCCCGTCGGTGATCCCGTTGAAATTCTAACCAACGAAAAAGTCGA
TGGGCCGTTAGTCGAGGCTCCGGCCATTATTCGAACTGATCGCGGCATCT
ATTATCTGTTCTTCTCTTCGCATTGCTTTACATCGTCGAAGTATAGTGTT
AAGTATGCATGGTCAACATCGTTAAAGGGGCCGTATACCAGGGCTGAGAG
GCCCTTGTTCCGGTCTGGGGACTTTGGGCTAAAGTCTCCTGGCGGTGCGA
CGGCTTCGGTTGATGGGTCTAGGATTGTTTTTCATGCCTTTTGTGGGGAT
TATAGATGTATGTATGCCGCGGCGATGAATATTACGGCTAATTATACGAT
TTTGCCGGCGGCGCTTTGA back to topCoding sequence (CDS) from alignment at ch4:1115462..1116730- >KYF_004622-T1 ID=KYF_004622-T1|Name=KYF_004622-T1|organism=Aspergillus niger KYF3|type=CDS|length=2430bp|location=Sequence derived from alignment at ch4:1115462..1116730- (Aspergillus niger KYF3)
AAAGACGGCCACTTCGTCCTCTACTACTCAGGCGAACTAAAAGACTGGCT
CCGCCACCACTGCGTCGGCGCCGCTGTCTCCAACGGCACAAGTCCCCTAG
GACCATACATCCCCCACAACACCACCCTCGCCTGTCCCCGCGACCACGGC
GGTGCCATCGACCCCGCCCCCTTCAGAGACGTCAACGGGACCCTCTACGT
CGTGTACAAAATCGACGGCAACAGCATCGGCCACGGCGGAGGCTGCAACA
ACGGCAAGAAACCCATCGTTTCCACGCCCATCATGCTCCAACAACTCAAA
GACGATGGAGTCACCCCCGTCGGTGATCCCGTTGAAATTCTAACCAACGA
AAAAGTCGATGGGCCGTTAGTCGAGGCTCCGGCCATTATTCGAACTGATC
GCGGCATCTATTATCTGTTCTTCTCTTCGCATTGCTTTACATCGTCGAAG
TATAGTGTTAAGTATGCATGGTCAACATCGTTAAAGGGGCCGTATACCAG
GGCTGAGAGGCCCTTGTTCCGGTCTGGGGACTTTGGGCTAAAGTCTCCTG
GCGGTGCGACGGCTTCGGTTGATGGGTCTAGGATTGTTTTTCATGCCTTT
TGTGGGGATTATAGATGTATGTATGCCGCGGCGATGAATATTACGGCTAA
TTATACGATTTTGCCGGCGGCGCTTTGAATGAAAGGCCTCCCGTCACTGC
TGAACAGCAGCAGCACCAAAAAATGGACACAATCCACCCCATCCACAGGC
GAGGGTGAGAATGAGAGTGGTAGTACTATATCACCCACCAAGCCGCCCGA
GCCATCCACACCCCCAGGAGGCTCAAACACCTCCATGATCTGGACGCGGA
AGAAGATAATATGGCTCATCACCCTGATAGCTCTAAGCGTAGCCATAATC
GTGGTGGTGATAACCGTCCCAGTAGTTCTCCTGCTGGACGATAAACACAA
CGACGATCCCAGCTACTACAATAGCGCCAACCGTCCAGTCCGCGTCGTGC
ATGACTTCCCCGACCCGGGTCTAATCCAGGTGAACAGCACGTGGTATGCA
TACGCTACAGTCGCCACACCGGACAATCCTGACGTCCCTCACGTCCCGGT
ATCGACATCGCGGAACTTTAGCAGCTGGACCTGGTTGCAGGGATACGATG
TCATGCCTGCAATTAGCAGTTGGGAAACGAATATGAACCAGTACGCTCCG
GACGTGATTCAACGCAAAGACGGCCACTTCGTCCTCTACTACTCAGGCGA
ACTAAAAGACTGGCTCCGCCACCACTGCGTCGGCGCCGCTGTCTCCAACG
GCACAAGTCCCCTAGGACCATACATCCCCCACAACACCACCCTCGCCTGT
CCCCGCGACCACGGCGGTGCCATCGACCCCGCCCCCTTCAGAGACGTCAA
CGGGACCCTCTACGTCGTGTACAAAATCGACGGCAACAGCATCGGCCACG
GCGGAGGCTGCAACAACGGCAAGAAACCCATCGTTTCCACGCCCATCATG
CTCCAACAACTCAAAGACGATGGAGTCACCCCCGTCGGTGATCCCGTTGA
AATTCTAACCAACGAAAAAGTCGATGGGCCGTTAGTCGAGGCTCCGGCCA
TTATTCGAACTGATCGCGGCATCTATTATCTGTTCTTCTCTTCGCATTGC
TTTACATCGTCGAAGTATAGTGTTAAGTATGCATGGTCAACATCGTTAAA
GGGGCCGTATACCAGGGCTGAGAGGCCCTTGTTCCGGTCTGGGGACTTTG
GGCTAAAGTCTCCTGGCGGTGCGACGGCTTCGGTTGATGGGTCTAGGATT
GTTTTTCATGCCTTTTGTGGGGATTATAGATGTATGTATGCCGCGGCGAT
GAATATTACGGCTAATTATACGATTTTGCCGGCGGCGCTTTGAATGAAAG
GCCTCCCGTCACTGCTGAACAGCAGCAGCACCAAAAAATGGACACAATCC
ACCCCATCCACAGGCGAGGGTGAGAATGAGAGTGGTAGTACTATATCACC
CACCAAGCCGCCCGAGCCATCCACACCCCCAGGAGGCTCAAACACCTCCA
TGATCTGGACGCGGAAGAAGATAATATGGCTCATCACCCTGATAGCTCTA
AGCGTAGCCATAATCGTGGTGGTGATAACCGTCCCAGTAGTTCTCCTGCT
GGACGATAAACACAACGACGATCCCAGCTACTACAATAGCGCCAACCGTC
CAGTCCGCGTCGTGCATGACTTCCCCGACCCGGGTCTAATCCAGGTGAAC
AGCACGTGGTATGCATACGCTACAGTCGCCACACCGGACAATCCTGACGT
CCCTCACGTCCCGGTATCGACATCGCGGAACTTTAGCAGCTGGACCTGGT
TGCAGGGATACGATGTCATGCCTGCAATTAGCAGTTGGGAAACGAATATG
AACCAGTACGCTCCGGACGTGATTCAACGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:GH43_33 |
| Note | CAZy:GH43_5 |
| Note | CAZy:GH43_31 |
| Note | CAZy:GH43_3 |
| Note | CAZy:GH43_8 |
| Note | CAZy:GH43 |
| Note | CAZy:GH43_30 |
| DBxref | InterPro:IPR006710 |
| DBxref | InterPro:IPR023296 |
| DBxref | PFAM:PF04616 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1115462..1116730 - |
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