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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1307674..1309672+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004701-T1 ID=KYF_004701-T1|Name=KYF_004701-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1999bp|location=Sequence derived from alignment at ch4:1307674..1309672+ (Aspergillus niger KYF3)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT
CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA
CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG
ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG
AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG
AGACTGTGGGCTTATCCGATCCCTGTTGAAGCGCTTACTCAATGAGGGGC
TGCTGCTAACTTGTGTTGTCTGATAGTGCATGGAACAGTTCAAGGCAGTA
GAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGC
ATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCC
TATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCG
GAAGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTGGC
CAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGT
GGCATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAAC
CTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGT
GGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACG
ACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGG
GACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGA
GCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAAAGCGCAGGATTACGAA
GGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCAT
CCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCC
TACCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGCTG
CTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCT
CCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTC
AGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGG
CCGCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCA
AAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACA
TACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGA
CGAACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAG
CAGGAGAGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCT
TATTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCA
ACGCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGC
CCGGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCC
TTACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATG
ATCCGCGCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTAC
CTGTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGC
GTTGAAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCC
AACGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACA
TATCGCTTCTTCGATTATGAGAGTACATGGTACGTAACCCACTCGGAAAT
CCCGAAGACCCGCAGAACCCAGCTAACAATCCTTGCAGGATGAACCGTCG
CAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAA back to topCoding sequence (CDS) from alignment at ch4:1307674..1309672+ >KYF_004701-T1 ID=KYF_004701-T1|Name=KYF_004701-T1|organism=Aspergillus niger KYF3|type=CDS|length=5607bp|location=Sequence derived from alignment at ch4:1307674..1309672+ (Aspergillus niger KYF3)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT
CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA
CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG
ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG
AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG
AGACTTGCATGGAACAGTTCAAGGCAGTAGAGAAGGAGATGAAGACAAAG
GCATATTCGAAAGAAGGGTTGTCGGCTGCATCGAGATTAGATCCTAAAGA
GAAGGAGAAGGTCGAGACTTGCGACTTCCTATCGAATATGGTGGACGAGC
TGCAACAGAAGATCGAGGCCTTCGAAGCGGAAGAGGAAACGCTTCACATG
CAAATGAAGAAGGGCAAGAAGGACGTGGCCAAGACGAATCGCCTATCAGA
CCTTTCACGCTTAACAGAACGCCATAAGTGGCATGTCAATAAGTTGGAAC
TGTTGCTACGGTCGCTGCAGAACGGCAACCTCGAAGTTGCTCAGGTGCTG
GATATCAAGGAAAGCATTAAGTACTATGTGGAGGATGGGCACAACATTGA
CTACTCTGGTGAGGATGAAACCTTGTACGACGACCTGAACCTGGACAACG
AGGCAGAGGTGCAGTTCGGCATGACAGGGGACAACGATAAAGTATCCTCG
CAAGACACCCAGTCGATCCAAGACGAGGAGCCGGAAATCAAGCCCAAGGT
CAACAAGGGTGAAAGCGCAGGATTACGAAGGCCATCTGCACAGATGAAGT
CCCCTCTACCTGTGTTAGCAACACTTCATCCGTCGACCTCCACGACTGCC
GCCTCAGGCATGAAACCCGCACCACCGCCTACCCGCCTCCCCGGAGAAAC
ACTCAAGTACGCGTCCGCTGCCGCTGCTGCTGCTGCAAGTGACAAGAACG
GGGTGGGCATTGCACCACTTCCGCCACCTCCAGGCGCAAGCCCCGCTTTC
CCGCACGCTGTGCCTGCAAACAAAGCTTCAGCCACTGCCTCGCCGAGCGT
TGCATCGGTACAACCTACTACATCCAAGGCCGCGCCGGTTCTCACGATAG
CGGCGGAGGACATCACCGGTGCACGATCAAAAACACCTTCTGTCAGCCCC
AACGTGGCTGCTGCGAGCACATCGTCACATACAATGGATAAAGTTGAGGC
CCCAGCAGCTGCCAAGGAGCAACCTGCGACGAACGGTGAGGCGACGAGTA
AGCAAGAGGAGCAGGAGCAGGAGCAGGAGCAGGAGAGCGAGGAATCGATC
TTCCACCTCCCTCCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCAC
GAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGC
GCATGCTTGCAACATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAG
AAGCCTCGTCATTACAAGCCTCAAAACCCTTACAATACGCCTTTATACTA
TCCTCAGGAACCGCTCTCCATCTTCGATGATCCGCGCTTGTACGAAACCG
GGCGCATCGACACGGATACACTGTTCTACCTGTTCTACTACCGACAAGGC
AGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAAGAACCAGAGCTGGCG
CTTCCACAAACAGTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGA
CGATCACGGAGGAGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAG
AGTACATGGATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATA
CTTGGAAGATGAACTGTAAATGACGTCCCGGAAGACGCAGCAGGAGATTG
ACAAGACCTTCAAGAAGGTCGCTGAAGGCATTCAAACATTCGAGGGTATC
TATGAGAAGATCCGGTCAACATCAAATATCACGCAACGGGATAAGCTCGA
GGAGAACCTGAAACGGGAGATCAAGAAGTTACAACGATATCGTGACCAAA
TCAAGTCATGGGCATCAGGAAACGAGGTCAAGGATAAGGGGCCGCTGCTA
GAGCAGCGCAGGGCCATTGAGACTTGCATGGAACAGTTCAAGGCAGTAGA
GAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGCAT
CGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCCTA
TCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCGGA
AGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTGGCCA
AGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGTGG
CATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAACCT
CGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGTGG
AGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACGAC
GACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGGGA
CAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGAGC
CGGAAATCAAGCCCAAGGTCAACAAGGGTGAAAGCGCAGGATTACGAAGG
CCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCATCC
GTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCCTA
CCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGCTGCT
GCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCTCC
AGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTCAG
CCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGGCC
GCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCAAA
AACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACATA
CAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGACG
AACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAGCA
GGAGAGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCTTA
TTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAAC
GCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCC
GGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTT
ACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGAT
CCGCGCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTACCT
GTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGT
TGAAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAA
CGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATA
TCGCTTCTTCGATTATGAGAGTACATGGATGAACCGTCGCAAGGCTGACT
TCAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAAATGACGTCCCGG
AAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGTCGCTGAAGGCAT
TCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAACATCAAATATCA
CGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAGATCAAGAAGTTA
CAACGATATCGTGACCAAATCAAGTCATGGGCATCAGGAAACGAGGTCAA
GGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTGAGACTTGCATGG
AACAGTTCAAGGCAGTAGAGAAGGAGATGAAGACAAAGGCATATTCGAAA
GAAGGGTTGTCGGCTGCATCGAGATTAGATCCTAAAGAGAAGGAGAAGGT
CGAGACTTGCGACTTCCTATCGAATATGGTGGACGAGCTGCAACAGAAGA
TCGAGGCCTTCGAAGCGGAAGAGGAAACGCTTCACATGCAAATGAAGAAG
GGCAAGAAGGACGTGGCCAAGACGAATCGCCTATCAGACCTTTCACGCTT
AACAGAACGCCATAAGTGGCATGTCAATAAGTTGGAACTGTTGCTACGGT
CGCTGCAGAACGGCAACCTCGAAGTTGCTCAGGTGCTGGATATCAAGGAA
AGCATTAAGTACTATGTGGAGGATGGGCACAACATTGACTACTCTGGTGA
GGATGAAACCTTGTACGACGACCTGAACCTGGACAACGAGGCAGAGGTGC
AGTTCGGCATGACAGGGGACAACGATAAAGTATCCTCGCAAGACACCCAG
TCGATCCAAGACGAGGAGCCGGAAATCAAGCCCAAGGTCAACAAGGGTGA
AAGCGCAGGATTACGAAGGCCATCTGCACAGATGAAGTCCCCTCTACCTG
TGTTAGCAACACTTCATCCGTCGACCTCCACGACTGCCGCCTCAGGCATG
AAACCCGCACCACCGCCTACCCGCCTCCCCGGAGAAACACTCAAGTACGC
GTCCGCTGCCGCTGCTGCTGCTGCAAGTGACAAGAACGGGGTGGGCATTG
CACCACTTCCGCCACCTCCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTG
CCTGCAAACAAAGCTTCAGCCACTGCCTCGCCGAGCGTTGCATCGGTACA
ACCTACTACATCCAAGGCCGCGCCGGTTCTCACGATAGCGGCGGAGGACA
TCACCGGTGCACGATCAAAAACACCTTCTGTCAGCCCCAACGTGGCTGCT
GCGAGCACATCGTCACATACAATGGATAAAGTTGAGGCCCCAGCAGCTGC
CAAGGAGCAACCTGCGACGAACGGTGAGGCGACGAGTAAGCAAGAGGAGC
AGGAGCAGGAGCAGGAGCAGGAGAGCGAGGAATCGATCTTCCACCTCCCT
CCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCACGAGGTCCCGGGC
GTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGCGCATGCTTGCAA
CATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAGAAGCCTCGTCAT
TACAAGCCTCAAAACCCTTACAATACGCCTTTATACTATCCTCAGGAACC
GCTCTCCATCTTCGATGATCCGCGCTTGTACGAAACCGGGCGCATCGACA
CGGATACACTGTTCTACCTGTTCTACTACCGACAAGGCAGTTACCAACAG
TATCTCGCGGCCAAGGCGTTGAAGAACCAGAGCTGGCGCTTCCACAAACA
GTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGACGATCACGGAGG
AGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAGAGTACATGGATG
AACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGAAGATGA
ACTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030015 | CCR4-NOT core complex |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007282 |
| DBxref | InterPro:IPR012270 |
| DBxref | InterPro:IPR038635 |
| DBxref | InterPro:IPR007207 |
| DBxref | PFAM:PF04065 |
| DBxref | PFAM:PF04153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1307674..1309672 + |
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