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KYF_004701-T1, KYF_004701-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004701-T1
Unique NameKYF_004701-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1307674..1309672+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004701-T1 ID=KYF_004701-T1|Name=KYF_004701-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1999bp|location=Sequence derived from alignment at ch4:1307674..1309672+ (Aspergillus niger KYF3)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG AGACTGTGGGCTTATCCGATCCCTGTTGAAGCGCTTACTCAATGAGGGGC TGCTGCTAACTTGTGTTGTCTGATAGTGCATGGAACAGTTCAAGGCAGTA GAGAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGC ATCGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCC TATCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCG GAAGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTGGC CAAGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGT GGCATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAAC CTCGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGT GGAGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACG ACGACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGG GACAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGA GCCGGAAATCAAGCCCAAGGTCAACAAGGGTGAAAGCGCAGGATTACGAA GGCCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCAT CCGTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCC TACCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGCTG CTGCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCT CCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTC AGCCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGG CCGCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCA AAAACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACA TACAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGA CGAACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAG CAGGAGAGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCT TATTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCA ACGCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGC CCGGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCC TTACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATG ATCCGCGCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTAC CTGTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGC GTTGAAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCC AACGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACA TATCGCTTCTTCGATTATGAGAGTACATGGTACGTAACCCACTCGGAAAT CCCGAAGACCCGCAGAACCCAGCTAACAATCCTTGCAGGATGAACCGTCG CAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAA
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Coding sequence (CDS) from alignment at ch4:1307674..1309672+

>KYF_004701-T1 ID=KYF_004701-T1|Name=KYF_004701-T1|organism=Aspergillus niger KYF3|type=CDS|length=5607bp|location=Sequence derived from alignment at ch4:1307674..1309672+ (Aspergillus niger KYF3)
ATGACGTCCCGGAAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGT
CGCTGAAGGCATTCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAA
CATCAAATATCACGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAG
ATCAAGAAGTTACAACGATATCGTGACCAAATCAAGTCATGGGCATCAGG
AAACGAGGTCAAGGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTG
AGACTTGCATGGAACAGTTCAAGGCAGTAGAGAAGGAGATGAAGACAAAG
GCATATTCGAAAGAAGGGTTGTCGGCTGCATCGAGATTAGATCCTAAAGA
GAAGGAGAAGGTCGAGACTTGCGACTTCCTATCGAATATGGTGGACGAGC
TGCAACAGAAGATCGAGGCCTTCGAAGCGGAAGAGGAAACGCTTCACATG
CAAATGAAGAAGGGCAAGAAGGACGTGGCCAAGACGAATCGCCTATCAGA
CCTTTCACGCTTAACAGAACGCCATAAGTGGCATGTCAATAAGTTGGAAC
TGTTGCTACGGTCGCTGCAGAACGGCAACCTCGAAGTTGCTCAGGTGCTG
GATATCAAGGAAAGCATTAAGTACTATGTGGAGGATGGGCACAACATTGA
CTACTCTGGTGAGGATGAAACCTTGTACGACGACCTGAACCTGGACAACG
AGGCAGAGGTGCAGTTCGGCATGACAGGGGACAACGATAAAGTATCCTCG
CAAGACACCCAGTCGATCCAAGACGAGGAGCCGGAAATCAAGCCCAAGGT
CAACAAGGGTGAAAGCGCAGGATTACGAAGGCCATCTGCACAGATGAAGT
CCCCTCTACCTGTGTTAGCAACACTTCATCCGTCGACCTCCACGACTGCC
GCCTCAGGCATGAAACCCGCACCACCGCCTACCCGCCTCCCCGGAGAAAC
ACTCAAGTACGCGTCCGCTGCCGCTGCTGCTGCTGCAAGTGACAAGAACG
GGGTGGGCATTGCACCACTTCCGCCACCTCCAGGCGCAAGCCCCGCTTTC
CCGCACGCTGTGCCTGCAAACAAAGCTTCAGCCACTGCCTCGCCGAGCGT
TGCATCGGTACAACCTACTACATCCAAGGCCGCGCCGGTTCTCACGATAG
CGGCGGAGGACATCACCGGTGCACGATCAAAAACACCTTCTGTCAGCCCC
AACGTGGCTGCTGCGAGCACATCGTCACATACAATGGATAAAGTTGAGGC
CCCAGCAGCTGCCAAGGAGCAACCTGCGACGAACGGTGAGGCGACGAGTA
AGCAAGAGGAGCAGGAGCAGGAGCAGGAGCAGGAGAGCGAGGAATCGATC
TTCCACCTCCCTCCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCAC
GAGGTCCCGGGCGTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGC
GCATGCTTGCAACATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAG
AAGCCTCGTCATTACAAGCCTCAAAACCCTTACAATACGCCTTTATACTA
TCCTCAGGAACCGCTCTCCATCTTCGATGATCCGCGCTTGTACGAAACCG
GGCGCATCGACACGGATACACTGTTCTACCTGTTCTACTACCGACAAGGC
AGTTACCAACAGTATCTCGCGGCCAAGGCGTTGAAGAACCAGAGCTGGCG
CTTCCACAAACAGTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGA
CGATCACGGAGGAGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAG
AGTACATGGATGAACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATA
CTTGGAAGATGAACTGTAAATGACGTCCCGGAAGACGCAGCAGGAGATTG
ACAAGACCTTCAAGAAGGTCGCTGAAGGCATTCAAACATTCGAGGGTATC
TATGAGAAGATCCGGTCAACATCAAATATCACGCAACGGGATAAGCTCGA
GGAGAACCTGAAACGGGAGATCAAGAAGTTACAACGATATCGTGACCAAA
TCAAGTCATGGGCATCAGGAAACGAGGTCAAGGATAAGGGGCCGCTGCTA
GAGCAGCGCAGGGCCATTGAGACTTGCATGGAACAGTTCAAGGCAGTAGA
GAAGGAGATGAAGACAAAGGCATATTCGAAAGAAGGGTTGTCGGCTGCAT
CGAGATTAGATCCTAAAGAGAAGGAGAAGGTCGAGACTTGCGACTTCCTA
TCGAATATGGTGGACGAGCTGCAACAGAAGATCGAGGCCTTCGAAGCGGA
AGAGGAAACGCTTCACATGCAAATGAAGAAGGGCAAGAAGGACGTGGCCA
AGACGAATCGCCTATCAGACCTTTCACGCTTAACAGAACGCCATAAGTGG
CATGTCAATAAGTTGGAACTGTTGCTACGGTCGCTGCAGAACGGCAACCT
CGAAGTTGCTCAGGTGCTGGATATCAAGGAAAGCATTAAGTACTATGTGG
AGGATGGGCACAACATTGACTACTCTGGTGAGGATGAAACCTTGTACGAC
GACCTGAACCTGGACAACGAGGCAGAGGTGCAGTTCGGCATGACAGGGGA
CAACGATAAAGTATCCTCGCAAGACACCCAGTCGATCCAAGACGAGGAGC
CGGAAATCAAGCCCAAGGTCAACAAGGGTGAAAGCGCAGGATTACGAAGG
CCATCTGCACAGATGAAGTCCCCTCTACCTGTGTTAGCAACACTTCATCC
GTCGACCTCCACGACTGCCGCCTCAGGCATGAAACCCGCACCACCGCCTA
CCCGCCTCCCCGGAGAAACACTCAAGTACGCGTCCGCTGCCGCTGCTGCT
GCTGCAAGTGACAAGAACGGGGTGGGCATTGCACCACTTCCGCCACCTCC
AGGCGCAAGCCCCGCTTTCCCGCACGCTGTGCCTGCAAACAAAGCTTCAG
CCACTGCCTCGCCGAGCGTTGCATCGGTACAACCTACTACATCCAAGGCC
GCGCCGGTTCTCACGATAGCGGCGGAGGACATCACCGGTGCACGATCAAA
AACACCTTCTGTCAGCCCCAACGTGGCTGCTGCGAGCACATCGTCACATA
CAATGGATAAAGTTGAGGCCCCAGCAGCTGCCAAGGAGCAACCTGCGACG
AACGGTGAGGCGACGAGTAAGCAAGAGGAGCAGGAGCAGGAGCAGGAGCA
GGAGAGCGAGGAATCGATCTTCCACCTCCCTCCCGGCCTGCAGGATCTTA
TTCAGTCGTTCGAGGTCACGAGGTCCCGGGCGTCAGCAAGCGCAGCCAAC
GCCTCCCCGTCAGTGCAGCGCATGCTTGCAACATCCCTCGCGAACTGCCC
GGAGCCTGCCGATGCGGAGAAGCCTCGTCATTACAAGCCTCAAAACCCTT
ACAATACGCCTTTATACTATCCTCAGGAACCGCTCTCCATCTTCGATGAT
CCGCGCTTGTACGAAACCGGGCGCATCGACACGGATACACTGTTCTACCT
GTTCTACTACCGACAAGGCAGTTACCAACAGTATCTCGCGGCCAAGGCGT
TGAAGAACCAGAGCTGGCGCTTCCACAAACAGTATCAAACCTGGTTCCAA
CGTCACGAGGAGCCGAAGACGATCACGGAGGAGTTTGAGCAGGGCACATA
TCGCTTCTTCGATTATGAGAGTACATGGATGAACCGTCGCAAGGCTGACT
TCAAGTTCGTCTACAAATACTTGGAAGATGAACTGTAAATGACGTCCCGG
AAGACGCAGCAGGAGATTGACAAGACCTTCAAGAAGGTCGCTGAAGGCAT
TCAAACATTCGAGGGTATCTATGAGAAGATCCGGTCAACATCAAATATCA
CGCAACGGGATAAGCTCGAGGAGAACCTGAAACGGGAGATCAAGAAGTTA
CAACGATATCGTGACCAAATCAAGTCATGGGCATCAGGAAACGAGGTCAA
GGATAAGGGGCCGCTGCTAGAGCAGCGCAGGGCCATTGAGACTTGCATGG
AACAGTTCAAGGCAGTAGAGAAGGAGATGAAGACAAAGGCATATTCGAAA
GAAGGGTTGTCGGCTGCATCGAGATTAGATCCTAAAGAGAAGGAGAAGGT
CGAGACTTGCGACTTCCTATCGAATATGGTGGACGAGCTGCAACAGAAGA
TCGAGGCCTTCGAAGCGGAAGAGGAAACGCTTCACATGCAAATGAAGAAG
GGCAAGAAGGACGTGGCCAAGACGAATCGCCTATCAGACCTTTCACGCTT
AACAGAACGCCATAAGTGGCATGTCAATAAGTTGGAACTGTTGCTACGGT
CGCTGCAGAACGGCAACCTCGAAGTTGCTCAGGTGCTGGATATCAAGGAA
AGCATTAAGTACTATGTGGAGGATGGGCACAACATTGACTACTCTGGTGA
GGATGAAACCTTGTACGACGACCTGAACCTGGACAACGAGGCAGAGGTGC
AGTTCGGCATGACAGGGGACAACGATAAAGTATCCTCGCAAGACACCCAG
TCGATCCAAGACGAGGAGCCGGAAATCAAGCCCAAGGTCAACAAGGGTGA
AAGCGCAGGATTACGAAGGCCATCTGCACAGATGAAGTCCCCTCTACCTG
TGTTAGCAACACTTCATCCGTCGACCTCCACGACTGCCGCCTCAGGCATG
AAACCCGCACCACCGCCTACCCGCCTCCCCGGAGAAACACTCAAGTACGC
GTCCGCTGCCGCTGCTGCTGCTGCAAGTGACAAGAACGGGGTGGGCATTG
CACCACTTCCGCCACCTCCAGGCGCAAGCCCCGCTTTCCCGCACGCTGTG
CCTGCAAACAAAGCTTCAGCCACTGCCTCGCCGAGCGTTGCATCGGTACA
ACCTACTACATCCAAGGCCGCGCCGGTTCTCACGATAGCGGCGGAGGACA
TCACCGGTGCACGATCAAAAACACCTTCTGTCAGCCCCAACGTGGCTGCT
GCGAGCACATCGTCACATACAATGGATAAAGTTGAGGCCCCAGCAGCTGC
CAAGGAGCAACCTGCGACGAACGGTGAGGCGACGAGTAAGCAAGAGGAGC
AGGAGCAGGAGCAGGAGCAGGAGAGCGAGGAATCGATCTTCCACCTCCCT
CCCGGCCTGCAGGATCTTATTCAGTCGTTCGAGGTCACGAGGTCCCGGGC
GTCAGCAAGCGCAGCCAACGCCTCCCCGTCAGTGCAGCGCATGCTTGCAA
CATCCCTCGCGAACTGCCCGGAGCCTGCCGATGCGGAGAAGCCTCGTCAT
TACAAGCCTCAAAACCCTTACAATACGCCTTTATACTATCCTCAGGAACC
GCTCTCCATCTTCGATGATCCGCGCTTGTACGAAACCGGGCGCATCGACA
CGGATACACTGTTCTACCTGTTCTACTACCGACAAGGCAGTTACCAACAG
TATCTCGCGGCCAAGGCGTTGAAGAACCAGAGCTGGCGCTTCCACAAACA
GTATCAAACCTGGTTCCAACGTCACGAGGAGCCGAAGACGATCACGGAGG
AGTTTGAGCAGGGCACATATCGCTTCTTCGATTATGAGAGTACATGGATG
AACCGTCGCAAGGCTGACTTCAAGTTCGTCTACAAATACTTGGAAGATGA
ACTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030015CCR4-NOT core complex
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004701KYF_004701Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004701-T1.exon1KYF_004701-T1.exon1Aspergillus niger KYF3exon
KYF_004701-T1.exon2KYF_004701-T1.exon2Aspergillus niger KYF3exon
KYF_004701-T1.exon3KYF_004701-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004701-T1.cdsKYF_004701-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004701-T1KYF_004701-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007282
DBxrefInterPro:IPR012270
DBxrefInterPro:IPR038635
DBxrefInterPro:IPR007207
DBxrefPFAM:PF04065
DBxrefPFAM:PF04153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1307674..1309672 +