You are here

Home

KYF_004709-T1, KYF_004709-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004709-T1
Unique NameKYF_004709-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1330306..1332043-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004709-T1 ID=KYF_004709-T1|Name=KYF_004709-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1738bp|location=Sequence derived from alignment at ch4:1330306..1332043- (Aspergillus niger KYF3)
ATGGCGGACTCCGAATTGCCCACTCGGCCCAAGCCCGAAGAAACCCCCGC
CGCTGCGGCCGCCCCCGCAGAGGGTGCCGAGACCAGCAAGAGCGCCAGCA
AGAACGCCGCGAAGAAGGCCGCAAAGGAGAAGGCCAAGGCTGAGAAGGCT
GCTGCTCGTGCTGCCCAGGAGAAGGCTCAGGCTGCTGCCGCCGCTGCCGA
CGACACCGCCAAGGACCTGTATGGCAAGCTTCCCGAGTCCGAAGATGTCA
TCGCCGCGACGAGATTCTCCGACATTTCCGACGAGCACTACGAGAAGGAG
GTCACCCTGGTGGCTCGTGTCGACAATGCCCGTGTGCAGAGTGCCAAGCT
GGCTTTCCTGATGCTGAGACAGCAGGGTCAGAAGCTGCAGGCTGTCATTG
CTCTTGCGGAGCCCATCTCCCGTCAGATGATCAAGTACACTGGTGGATTG
AACGTCAACTCCATCGTCCAGGTCACCGGTATCATCAAGAAGCCTGCCGT
GCCTATCTCGTCGGCTACTCTTAGCAACCACGAAATTCACATTCGCAAGG
TCTACATGATCTCCGAGGCCGCCCAGATGCTCCCTATGCAGGTCAAGGAT
GCTGAGAGACCGCCCCCGGAGACCAGCGAGGAGGGATTCGAGGTTGGCGA
GGATGGCGCTCCCATCGTCACTCTCAAGACCCGTCTCGACAACCGGGTCC
TTGATCTCCAGACCGAAACCAGTCAGGCTATCACCTGGATCTCCAGCGGT
GTGGCTGAACTGTTCGCCGAATACATGATCAAGAGCGGTTCGCGGTGGAT
CTTCACCCCCAAGCTGGTGGGTGCGGCTACCGAGGGTGGTAGCAACGTCT
TTGAGGTCAAGTACTTCAAGAAGAACGCCTACCTGGCCCAGAGTCCCCAG
CTGTACAAGCAGATGTGCATTGCTGGTGACATGGAGAGTGTTTTCGAAAT
CGCTCCCGTCTTCCGTGCTGAAGACAGCAACACCCACAGACACTTGACTG
AGGTAGGTCTCAAATACATCACAAAAGCAATAGCTTGCGTACATGTACTG
ATTTCGCTAGTTCGCTGGTCTCGATTTCGAGAAGACGTTCCGCGGCCACT
ACCACGAGGTCTTGGAGTTCGCCGAGAACCTCCTCGTCTTCATCCTTTCC
CAGCTCAAGGAGCGCTACGCTGACAAGATCGCCATTATCCAGAAGTCCTA
CCCCAAGGCGGGTGACTTCAAGCTCCCCAAGGATGGCAAGGCCCTCCGCC
TGAACTACATGGACGGTGTTGCTATGCTGAAGGAGGCTGGTGTTGACGTC
TCCGAGCAGGAGCGCTTCGAGAATGACTTCACCACCGCGATGGAGAAGCA
GCTCGGACAGATCATCCGCGACAAATATGACACCGATTTCTACGTCCTCG
ACAAGTTCCCGATGGCCGTCCGTCCTTTCTACACCAAGGCCTGCCCTCAG
GACCCCCGCTTCTCCAACTCGTATGACTTCTTCATGCGTGGTGAGGAGAT
CATGTCCGGTGCCCAGCGTATCAACGACATCAAGGAGCTGGAGGAGTCGA
TGGTCGCCAAGGGCCTCAACCCCAACCAGGAGGGCTTCGAGGACTACCTG
TCTGCTTTCCGCCAGGGCTGTCCTCCCCACGCCGGTGGTGGTCTGGGTCT
GAACCGCATTGTCATGTTCTTCCTGGGTCTGCCTAACGTTCGTCTGGCGT
CCCTGTTCCCCCGTGACCCCCAGCGTCTCCGCCCTTAA
back to top

Coding sequence (CDS) from alignment at ch4:1330306..1332043-

>KYF_004709-T1 ID=KYF_004709-T1|Name=KYF_004709-T1|organism=Aspergillus niger KYF3|type=CDS|length=3360bp|location=Sequence derived from alignment at ch4:1330306..1332043- (Aspergillus niger KYF3)
TTCGCTGGTCTCGATTTCGAGAAGACGTTCCGCGGCCACTACCACGAGGT
CTTGGAGTTCGCCGAGAACCTCCTCGTCTTCATCCTTTCCCAGCTCAAGG
AGCGCTACGCTGACAAGATCGCCATTATCCAGAAGTCCTACCCCAAGGCG
GGTGACTTCAAGCTCCCCAAGGATGGCAAGGCCCTCCGCCTGAACTACAT
GGACGGTGTTGCTATGCTGAAGGAGGCTGGTGTTGACGTCTCCGAGCAGG
AGCGCTTCGAGAATGACTTCACCACCGCGATGGAGAAGCAGCTCGGACAG
ATCATCCGCGACAAATATGACACCGATTTCTACGTCCTCGACAAGTTCCC
GATGGCCGTCCGTCCTTTCTACACCAAGGCCTGCCCTCAGGACCCCCGCT
TCTCCAACTCGTATGACTTCTTCATGCGTGGTGAGGAGATCATGTCCGGT
GCCCAGCGTATCAACGACATCAAGGAGCTGGAGGAGTCGATGGTCGCCAA
GGGCCTCAACCCCAACCAGGAGGGCTTCGAGGACTACCTGTCTGCTTTCC
GCCAGGGCTGTCCTCCCCACGCCGGTGGTGGTCTGGGTCTGAACCGCATT
GTCATGTTCTTCCTGGGTCTGCCTAACGTTCGTCTGGCGTCCCTGTTCCC
CCGTGACCCCCAGCGTCTCCGCCCTTAAATGGCGGACTCCGAATTGCCCA
CTCGGCCCAAGCCCGAAGAAACCCCCGCCGCTGCGGCCGCCCCCGCAGAG
GGTGCCGAGACCAGCAAGAGCGCCAGCAAGAACGCCGCGAAGAAGGCCGC
AAAGGAGAAGGCCAAGGCTGAGAAGGCTGCTGCTCGTGCTGCCCAGGAGA
AGGCTCAGGCTGCTGCCGCCGCTGCCGACGACACCGCCAAGGACCTGTAT
GGCAAGCTTCCCGAGTCCGAAGATGTCATCGCCGCGACGAGATTCTCCGA
CATTTCCGACGAGCACTACGAGAAGGAGGTCACCCTGGTGGCTCGTGTCG
ACAATGCCCGTGTGCAGAGTGCCAAGCTGGCTTTCCTGATGCTGAGACAG
CAGGGTCAGAAGCTGCAGGCTGTCATTGCTCTTGCGGAGCCCATCTCCCG
TCAGATGATCAAGTACACTGGTGGATTGAACGTCAACTCCATCGTCCAGG
TCACCGGTATCATCAAGAAGCCTGCCGTGCCTATCTCGTCGGCTACTCTT
AGCAACCACGAAATTCACATTCGCAAGGTCTACATGATCTCCGAGGCCGC
CCAGATGCTCCCTATGCAGGTCAAGGATGCTGAGAGACCGCCCCCGGAGA
CCAGCGAGGAGGGATTCGAGGTTGGCGAGGATGGCGCTCCCATCGTCACT
CTCAAGACCCGTCTCGACAACCGGGTCCTTGATCTCCAGACCGAAACCAG
TCAGGCTATCACCTGGATCTCCAGCGGTGTGGCTGAACTGTTCGCCGAAT
ACATGATCAAGAGCGGTTCGCGGTGGATCTTCACCCCCAAGCTGGTGGGT
GCGGCTACCGAGGGTGGTAGCAACGTCTTTGAGGTCAAGTACTTCAAGAA
GAACGCCTACCTGGCCCAGAGTCCCCAGCTGTACAAGCAGATGTGCATTG
CTGGTGACATGGAGAGTGTTTTCGAAATCGCTCCCGTCTTCCGTGCTGAA
GACAGCAACACCCACAGACACTTGACTGAGTTCGCTGGTCTCGATTTCGA
GAAGACGTTCCGCGGCCACTACCACGAGGTCTTGGAGTTCGCCGAGAACC
TCCTCGTCTTCATCCTTTCCCAGCTCAAGGAGCGCTACGCTGACAAGATC
GCCATTATCCAGAAGTCCTACCCCAAGGCGGGTGACTTCAAGCTCCCCAA
GGATGGCAAGGCCCTCCGCCTGAACTACATGGACGGTGTTGCTATGCTGA
AGGAGGCTGGTGTTGACGTCTCCGAGCAGGAGCGCTTCGAGAATGACTTC
ACCACCGCGATGGAGAAGCAGCTCGGACAGATCATCCGCGACAAATATGA
CACCGATTTCTACGTCCTCGACAAGTTCCCGATGGCCGTCCGTCCTTTCT
ACACCAAGGCCTGCCCTCAGGACCCCCGCTTCTCCAACTCGTATGACTTC
TTCATGCGTGGTGAGGAGATCATGTCCGGTGCCCAGCGTATCAACGACAT
CAAGGAGCTGGAGGAGTCGATGGTCGCCAAGGGCCTCAACCCCAACCAGG
AGGGCTTCGAGGACTACCTGTCTGCTTTCCGCCAGGGCTGTCCTCCCCAC
GCCGGTGGTGGTCTGGGTCTGAACCGCATTGTCATGTTCTTCCTGGGTCT
GCCTAACGTTCGTCTGGCGTCCCTGTTCCCCCGTGACCCCCAGCGTCTCC
GCCCTTAAATGGCGGACTCCGAATTGCCCACTCGGCCCAAGCCCGAAGAA
ACCCCCGCCGCTGCGGCCGCCCCCGCAGAGGGTGCCGAGACCAGCAAGAG
CGCCAGCAAGAACGCCGCGAAGAAGGCCGCAAAGGAGAAGGCCAAGGCTG
AGAAGGCTGCTGCTCGTGCTGCCCAGGAGAAGGCTCAGGCTGCTGCCGCC
GCTGCCGACGACACCGCCAAGGACCTGTATGGCAAGCTTCCCGAGTCCGA
AGATGTCATCGCCGCGACGAGATTCTCCGACATTTCCGACGAGCACTACG
AGAAGGAGGTCACCCTGGTGGCTCGTGTCGACAATGCCCGTGTGCAGAGT
GCCAAGCTGGCTTTCCTGATGCTGAGACAGCAGGGTCAGAAGCTGCAGGC
TGTCATTGCTCTTGCGGAGCCCATCTCCCGTCAGATGATCAAGTACACTG
GTGGATTGAACGTCAACTCCATCGTCCAGGTCACCGGTATCATCAAGAAG
CCTGCCGTGCCTATCTCGTCGGCTACTCTTAGCAACCACGAAATTCACAT
TCGCAAGGTCTACATGATCTCCGAGGCCGCCCAGATGCTCCCTATGCAGG
TCAAGGATGCTGAGAGACCGCCCCCGGAGACCAGCGAGGAGGGATTCGAG
GTTGGCGAGGATGGCGCTCCCATCGTCACTCTCAAGACCCGTCTCGACAA
CCGGGTCCTTGATCTCCAGACCGAAACCAGTCAGGCTATCACCTGGATCT
CCAGCGGTGTGGCTGAACTGTTCGCCGAATACATGATCAAGAGCGGTTCG
CGGTGGATCTTCACCCCCAAGCTGGTGGGTGCGGCTACCGAGGGTGGTAG
CAACGTCTTTGAGGTCAAGTACTTCAAGAAGAACGCCTACCTGGCCCAGA
GTCCCCAGCTGTACAAGCAGATGTGCATTGCTGGTGACATGGAGAGTGTT
TTCGAAATCGCTCCCGTCTTCCGTGCTGAAGACAGCAACACCCACAGACA
CTTGACTGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004815aspartate-tRNA ligase activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006422aspartyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004709KYF_004709Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004709-T1KYF_004709-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004709-T1.cdsKYF_004709-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004709-T1.exon2KYF_004709-T1.exon2Aspergillus niger KYF3exon
KYF_004709-T1.exon1KYF_004709-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR004523
DBxrefInterPro:IPR004364
DBxrefInterPro:IPR002312
DBxrefPFAM:PF00152
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1330306..1332043 -
Powered by Drupal