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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1878126..1879010+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004887-T1 ID=KYF_004887-T1|Name=KYF_004887-T1|organism=Aspergillus niger KYF3|type=mRNA|length=885bp|location=Sequence derived from alignment at ch4:1878126..1879010+ (Aspergillus niger KYF3)
ATGGCCTACGACCCCCGACTGTCCAGTGCAGGCACTGCGACCGCTCCCTC
CCCTCCACCACCACCCCCACCACCCCCAGAAGCCATGGGATCAACAACTC
AACCTCAACCCACCACGACGAACGAGGACAAAAACACAGTGCCAGAATCG
GAGTCCTCATCATCCTCATCATATAAACTCCGATTCTGCACCGTGTGCGC
CTCCAATCAGAACCGCTCTATGGAAGCCCACCTCCGTCTCTCCACAGCGA
CGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGGCTCTCTAGTCCGGCTG
CCCGGGCCCTCAATCACCCAACCCAACGTCTACAACTTCAACACAACCTC
GTACTCTCAAATGTACGACGAGCTGCTCTCCAAAGACGAGCGTCTCTACC
GCAACAACGGCCTCCTGAACATGCTCGAGCGCAACCGTAACTTGAAATGG
GGCCCAGAGCGCTTCCAGGACTGGGTACCGGGGCAGCCGCGCGTCGAGCA
CGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACTGAAGGCGGCGTTGTCG
ATGTAATCATCACCTGTGAAGAACGGTGCTGGGATGCCGTGGTAGACGAT
CTTATGAATAAGGGATCACCCTTGAACCGGCCCGTGCATGTCTTCAACGT
GGATATTAAGGATAATCACGAAGAGGCATTAGTAGGAGGCAAGGCTATCT
TGGATCTAGCCAATCGGTTAAACGAGGCTGCCTCGCAGGAGAGAAAGACG
AATGGTGCCGATGGATGGGAGAACGGAGTCGGGGAGGCGAGACGGAATTT
CGATGCTCGCGTGCCTGATATCCTGGCTGAGTGGCAGGAGAGATGGCCTC
ATTTGCCGGCTTTGTGGACACTGGCTTGGCTATAG back to topCoding sequence (CDS) from alignment at ch4:1878126..1879010+ >KYF_004887-T1 ID=KYF_004887-T1|Name=KYF_004887-T1|organism=Aspergillus niger KYF3|type=CDS|length=885bp|location=Sequence derived from alignment at ch4:1878126..1879010+ (Aspergillus niger KYF3)
ATGGCCTACGACCCCCGACTGTCCAGTGCAGGCACTGCGACCGCTCCCTC
CCCTCCACCACCACCCCCACCACCCCCAGAAGCCATGGGATCAACAACTC
AACCTCAACCCACCACGACGAACGAGGACAAAAACACAGTGCCAGAATCG
GAGTCCTCATCATCCTCATCATATAAACTCCGATTCTGCACCGTGTGCGC
CTCCAATCAGAACCGCTCTATGGAAGCCCACCTCCGTCTCTCCACAGCGA
CGAGTCCCTTCCCTGTAATTTCCTTCGGGACGGGCTCTCTAGTCCGGCTG
CCCGGGCCCTCAATCACCCAACCCAACGTCTACAACTTCAACACAACCTC
GTACTCTCAAATGTACGACGAGCTGCTCTCCAAAGACGAGCGTCTCTACC
GCAACAACGGCCTCCTGAACATGCTCGAGCGCAACCGTAACTTGAAATGG
GGCCCAGAGCGCTTCCAGGACTGGGTACCGGGGCAGCCGCGCGTCGAGCA
CGTCTCGAAGGGCGATAAGGGCGCCCTAGGTACTGAAGGCGGCGTTGTCG
ATGTAATCATCACCTGTGAAGAACGGTGCTGGGATGCCGTGGTAGACGAT
CTTATGAATAAGGGATCACCCTTGAACCGGCCCGTGCATGTCTTCAACGT
GGATATTAAGGATAATCACGAAGAGGCATTAGTAGGAGGCAAGGCTATCT
TGGATCTAGCCAATCGGTTAAACGAGGCTGCCTCGCAGGAGAGAAAGACG
AATGGTGCCGATGGATGGGAGAACGGAGTCGGGGAGGCGAGACGGAATTT
CGATGCTCGCGTGCCTGATATCCTGGCTGAGTGGCAGGAGAGATGGCCTC
ATTTGCCGGCTTTGTGGACACTGGCTTGGCTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004721 | phosphoprotein phosphatase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JW6 |
| DBxref | InterPro:IPR006811 |
| DBxref | PFAM:PF04722 |
| Product | RNA polymerase II subunit A C-terminal domain phosphatase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1878126..1879010 + |
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