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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2108061..2108748- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_004944-T1 ID=KYF_004944-T1|Name=KYF_004944-T1|organism=Aspergillus niger KYF3|type=mRNA|length=688bp|location=Sequence derived from alignment at ch4:2108061..2108748- (Aspergillus niger KYF3)
ATGTCCGGTGAAGCCTGGCTCTATCTGTTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGTGATCTGGAAT
GGTATGATCTGGCTCTATCCTCCCTCTTGTCTCGCCGATTTCTGTCGTGT
GCGTGGACGAGCTCTTGTGAGCCGCATGGGAGCTCGCCATGGATTGCGAC
AGCGTGATGGAACCCAACCAGCTAACGAACCCGGTTCGCTCCCGCAGTGA
CTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTC
CCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGC
TACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAA
GAAGTAATGCTGTCTTTTCCAGCTCCGCCATGCTGCAGCCCAACTAACAC
AACCGCCCTTTCTGCAGGATCTACGAGAACCAGCACCTCCTGGATGCGAC
CGAGATCTTCCGCAAGCTGAATGTCCACAAGAAGGTTAGACTGCACTGTC
CCAATCCCGCTACCAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATC
TTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACA
GCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGA back to topCoding sequence (CDS) from alignment at ch4:2108061..2108748- >KYF_004944-T1 ID=KYF_004944-T1|Name=KYF_004944-T1|organism=Aspergillus niger KYF3|type=CDS|length=1668bp|location=Sequence derived from alignment at ch4:2108061..2108748- (Aspergillus niger KYF3)
GAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCT
CTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTAC
GAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAATGT
CCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAAC
GCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTT
CATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGG
CGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGTTGGCGG
TGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATG
TACAGTGATCTGGAATGGAATCTTTCATCAAGCTGGGCTTCCACCTCCTG
ATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATCCGCGACGA
GTCTCACTGAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATC
TTCCGCAAGCTGAATGTCCACAAGAAGTGACTACATCAACCCCATTGATC
TGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCGTTCACGCT
TTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCCATCGTCCT
GAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTG
GCTCTATCTGTTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTGCAGG
TCTTCTTTACTATCATGTACAGTGATCTGGAATGGAATCTTTCATCAAGC
TGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTC
GCCTTGATCCGCGACGAGTCTCACTGAGATCTACGAGAACCAGCACCTCC
TGGATGCGACCGAGATCTTCCGCAAGCTGAATGTCCACAAGAAGTGACTA
CATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCG
AAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTAC
TGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAA
ATGTCCGGTGAAGCCTGGCTCTATCTGTTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGTGATCTGGAAT
GGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACC
TCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTA
CGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAATG
TCCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAA
CGCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGT
TCATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTG
GCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGTTGGCG
GTGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCAT
GTACAGTGATCTGGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033466 |
| DBxref | InterPro:IPR003377 |
| DBxref | PFAM:PF03311 |
| Product | COPII-coated vesicle protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2108061..2108748 - |
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