You are here

Home

KYF_004952-T1, KYF_004952-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004952-T1
Unique NameKYF_004952-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2128580..2129668-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004952-T1 ID=KYF_004952-T1|Name=KYF_004952-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1089bp|location=Sequence derived from alignment at ch4:2128580..2129668- (Aspergillus niger KYF3)
ATGTTGAACCGCCTCTTCCGGCCGCAGTCCGCGCTGCGTGCTGCCTCCGC
CTTCTCCCAGGTGAGCTGACCCTGTCCCAATGTCCGGGGTGGGCTCATAG
CTAACCAACCTGACCTCCGCCAGAAGCCCGTCTCCGCGCTCCCACGCTTC
CAGATCCGGAGCCTGCACCGCGTGCCCCAATTGACCAACGATCAGTATTT
CAAAAACAATGGCGTTCCGGAGCTGCTATCGCCCGAGGCGTTCGATTTCG
CCTGGACGCAATACCAGGGTCTGCTCATTGACAAGCTGAACCTGATGACG
CAGGGTTAGTATCCTCGCAGTGCAGCTCAAACTCCGCTGGTATGAGACTA
ACATCATCGTTTTTCTACTGCAACAGACACCGTCGACGCCGACGCAAAGC
CCGGAGAACTGCTGGTCAAGTACTCCCGCCGGCCGGAGATGGCATCCGTG
TTCAACTATGCCTCGATGGCCCACAACAACCACTTCTTCTTCAACTGCCT
GGTGAGTGGTACCAAGGTCAGGTCGAACTGTCGAGCTCAGCATCTAACAA
GCCCTGTCCTATAGTCCCCCCAACAAACCCAGATCCCCGAAAAGTTCGCC
AAAGACATCGTCGACACCTGCTCCTCGATCGAATCCCTGAAACTCGATTT
CCTGGCCACCGCCAACGCCATGTTCGGCCCCGGCTTCGTCTGGCTGGCCA
AGAACCTGGAGCGGGAGGGTCTGATGCACATCTTCTGCACGTATAATGCT
GGCTCGCCCTACCCGGCGGCTCATGCGCGGAGGCAACCGGTCGACATGGC
GACACACTCGCCGGACGCGCCGCTGGGCAACCAGTACGCTGGCGCGATGG
GTGCGCACGCGGCTAACCAGAAGAACATGGCGCCGGGTGCTTTGGATGTG
CAGCCTATTCTGTGTGTTAACACGTGGGAGCATGTGTGGATGATGGACTA
TGGTATTGGCGGTAAGGCGGAGTACTTGGAGCGCTGGTGGGATCGGATTA
ACTGGGAGGTGGTGTTCGACAACTACAATGCGGTTGGGCCGGTTAAGGGC
AATGCGGCTAATGCTGGACGGAACTTGAGCATGCTGTGA
back to top

Coding sequence (CDS) from alignment at ch4:2128580..2129668-

>KYF_004952-T1 ID=KYF_004952-T1|Name=KYF_004952-T1|organism=Aspergillus niger KYF3|type=CDS|length=3564bp|location=Sequence derived from alignment at ch4:2128580..2129668- (Aspergillus niger KYF3)
TCCCCCCAACAAACCCAGATCCCCGAAAAGTTCGCCAAAGACATCGTCGA
CACCTGCTCCTCGATCGAATCCCTGAAACTCGATTTCCTGGCCACCGCCA
ACGCCATGTTCGGCCCCGGCTTCGTCTGGCTGGCCAAGAACCTGGAGCGG
GAGGGTCTGATGCACATCTTCTGCACGTATAATGCTGGCTCGCCCTACCC
GGCGGCTCATGCGCGGAGGCAACCGGTCGACATGGCGACACACTCGCCGG
ACGCGCCGCTGGGCAACCAGTACGCTGGCGCGATGGGTGCGCACGCGGCT
AACCAGAAGAACATGGCGCCGGGTGCTTTGGATGTGCAGCCTATTCTGTG
TGTTAACACGTGGGAGCATGTGTGGATGATGGACTATGGTATTGGCGGTA
AGGCGGAGTACTTGGAGCGCTGGTGGGATCGGATTAACTGGGAGGTGGTG
TTCGACAACTACAATGCGGTTGGGCCGGTTAAGGGCAATGCGGCTAATGC
TGGACGGAACTTGAGCATGCTGTGAACACCGTCGACGCCGACGCAAAGCC
CGGAGAACTGCTGGTCAAGTACTCCCGCCGGCCGGAGATGGCATCCGTGT
TCAACTATGCCTCGATGGCCCACAACAACCACTTCTTCTTCAACTGCCTG
AAGCCCGTCTCCGCGCTCCCACGCTTCCAGATCCGGAGCCTGCACCGCGT
GCCCCAATTGACCAACGATCAGTATTTCAAAAACAATGGCGTTCCGGAGC
TGCTATCGCCCGAGGCGTTCGATTTCGCCTGGACGCAATACCAGGGTCTG
CTCATTGACAAGCTGAACCTGATGACGCAGGATGTTGAACCGCCTCTTCC
GGCCGCAGTCCGCGCTGCGTGCTGCCTCCGCCTTCTCCCAGTCCCCCCAA
CAAACCCAGATCCCCGAAAAGTTCGCCAAAGACATCGTCGACACCTGCTC
CTCGATCGAATCCCTGAAACTCGATTTCCTGGCCACCGCCAACGCCATGT
TCGGCCCCGGCTTCGTCTGGCTGGCCAAGAACCTGGAGCGGGAGGGTCTG
ATGCACATCTTCTGCACGTATAATGCTGGCTCGCCCTACCCGGCGGCTCA
TGCGCGGAGGCAACCGGTCGACATGGCGACACACTCGCCGGACGCGCCGC
TGGGCAACCAGTACGCTGGCGCGATGGGTGCGCACGCGGCTAACCAGAAG
AACATGGCGCCGGGTGCTTTGGATGTGCAGCCTATTCTGTGTGTTAACAC
GTGGGAGCATGTGTGGATGATGGACTATGGTATTGGCGGTAAGGCGGAGT
ACTTGGAGCGCTGGTGGGATCGGATTAACTGGGAGGTGGTGTTCGACAAC
TACAATGCGGTTGGGCCGGTTAAGGGCAATGCGGCTAATGCTGGACGGAA
CTTGAGCATGCTGTGAACACCGTCGACGCCGACGCAAAGCCCGGAGAACT
GCTGGTCAAGTACTCCCGCCGGCCGGAGATGGCATCCGTGTTCAACTATG
CCTCGATGGCCCACAACAACCACTTCTTCTTCAACTGCCTGAAGCCCGTC
TCCGCGCTCCCACGCTTCCAGATCCGGAGCCTGCACCGCGTGCCCCAATT
GACCAACGATCAGTATTTCAAAAACAATGGCGTTCCGGAGCTGCTATCGC
CCGAGGCGTTCGATTTCGCCTGGACGCAATACCAGGGTCTGCTCATTGAC
AAGCTGAACCTGATGACGCAGGATGTTGAACCGCCTCTTCCGGCCGCAGT
CCGCGCTGCGTGCTGCCTCCGCCTTCTCCCAGTCCCCCCAACAAACCCAG
ATCCCCGAAAAGTTCGCCAAAGACATCGTCGACACCTGCTCCTCGATCGA
ATCCCTGAAACTCGATTTCCTGGCCACCGCCAACGCCATGTTCGGCCCCG
GCTTCGTCTGGCTGGCCAAGAACCTGGAGCGGGAGGGTCTGATGCACATC
TTCTGCACGTATAATGCTGGCTCGCCCTACCCGGCGGCTCATGCGCGGAG
GCAACCGGTCGACATGGCGACACACTCGCCGGACGCGCCGCTGGGCAACC
AGTACGCTGGCGCGATGGGTGCGCACGCGGCTAACCAGAAGAACATGGCG
CCGGGTGCTTTGGATGTGCAGCCTATTCTGTGTGTTAACACGTGGGAGCA
TGTGTGGATGATGGACTATGGTATTGGCGGTAAGGCGGAGTACTTGGAGC
GCTGGTGGGATCGGATTAACTGGGAGGTGGTGTTCGACAACTACAATGCG
GTTGGGCCGGTTAAGGGCAATGCGGCTAATGCTGGACGGAACTTGAGCAT
GCTGTGAACACCGTCGACGCCGACGCAAAGCCCGGAGAACTGCTGGTCAA
GTACTCCCGCCGGCCGGAGATGGCATCCGTGTTCAACTATGCCTCGATGG
CCCACAACAACCACTTCTTCTTCAACTGCCTGAAGCCCGTCTCCGCGCTC
CCACGCTTCCAGATCCGGAGCCTGCACCGCGTGCCCCAATTGACCAACGA
TCAGTATTTCAAAAACAATGGCGTTCCGGAGCTGCTATCGCCCGAGGCGT
TCGATTTCGCCTGGACGCAATACCAGGGTCTGCTCATTGACAAGCTGAAC
CTGATGACGCAGGATGTTGAACCGCCTCTTCCGGCCGCAGTCCGCGCTGC
GTGCTGCCTCCGCCTTCTCCCAGTCCCCCCAACAAACCCAGATCCCCGAA
AAGTTCGCCAAAGACATCGTCGACACCTGCTCCTCGATCGAATCCCTGAA
ACTCGATTTCCTGGCCACCGCCAACGCCATGTTCGGCCCCGGCTTCGTCT
GGCTGGCCAAGAACCTGGAGCGGGAGGGTCTGATGCACATCTTCTGCACG
TATAATGCTGGCTCGCCCTACCCGGCGGCTCATGCGCGGAGGCAACCGGT
CGACATGGCGACACACTCGCCGGACGCGCCGCTGGGCAACCAGTACGCTG
GCGCGATGGGTGCGCACGCGGCTAACCAGAAGAACATGGCGCCGGGTGCT
TTGGATGTGCAGCCTATTCTGTGTGTTAACACGTGGGAGCATGTGTGGAT
GATGGACTATGGTATTGGCGGTAAGGCGGAGTACTTGGAGCGCTGGTGGG
ATCGGATTAACTGGGAGGTGGTGTTCGACAACTACAATGCGGTTGGGCCG
GTTAAGGGCAATGCGGCTAATGCTGGACGGAACTTGAGCATGCTGTGAAC
ACCGTCGACGCCGACGCAAAGCCCGGAGAACTGCTGGTCAAGTACTCCCG
CCGGCCGGAGATGGCATCCGTGTTCAACTATGCCTCGATGGCCCACAACA
ACCACTTCTTCTTCAACTGCCTGAAGCCCGTCTCCGCGCTCCCACGCTTC
CAGATCCGGAGCCTGCACCGCGTGCCCCAATTGACCAACGATCAGTATTT
CAAAAACAATGGCGTTCCGGAGCTGCTATCGCCCGAGGCGTTCGATTTCG
CCTGGACGCAATACCAGGGTCTGCTCATTGACAAGCTGAACCTGATGACG
CAGGATGTTGAACCGCCTCTTCCGGCCGCAGTCCGCGCTGCGTGCTGCCT
CCGCCTTCTCCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0004784superoxide dismutase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006801superoxide metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004952KYF_004952Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004952-T1KYF_004952-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004952-T1.cdsKYF_004952-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004952-T1.exon4KYF_004952-T1.exon4Aspergillus niger KYF3exon
KYF_004952-T1.exon3KYF_004952-T1.exon3Aspergillus niger KYF3exon
KYF_004952-T1.exon2KYF_004952-T1.exon2Aspergillus niger KYF3exon
KYF_004952-T1.exon1KYF_004952-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036324
DBxrefInterPro:IPR019832
DBxrefInterPro:IPR036314
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2128580..2129668 -
Powered by Drupal