You are here

KYF_005188-T1, KYF_005188-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005188-T1
Unique NameKYF_005188-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2939487..2940122+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005188-T1 ID=KYF_005188-T1|Name=KYF_005188-T1|organism=Aspergillus niger KYF3|type=mRNA|length=636bp|location=Sequence derived from alignment at ch4:2939487..2940122+ (Aspergillus niger KYF3)
ATGTCCACCCTCGACGACATCTTCGGCTCCTCCCCGCCTCCCACAACCCA CCACGCTCACCCCAACCCGCCCACCACCACCGAACCCTCCGACCTCCCCT CCCTCCGCCGCCAACACGTCACAGCCGGCTACCGCGACGGCATCAGCGCC TCCAAAACCTCCCATGTCCAAGCCGGCTTTGACGCCGGCTTTCCCATCGG CGCACAACTCGGCATGCGCGCTGGTACTATCCTCGGTATTCTCGAGGGTG TGCTGCGCGGTTACGACGAGAGCCAGAAAGCCGTGGTGAAGAAGCTGCCT GCGGGTCGGAAGGGCGCCACCAGCACCAATGGCACCGCCACTCCTACTTC TACAATGACCGACGAGGAACGCCAAGCTAAGCGAGCAGAGATACTAGCAT TGTACCAACAAGCCGTGAAGGAATTGGATGTGCGGAAGGTATTCGAGGGG ATCAGTGAGAAGGAAATCTCAGGGGGAGAAAAGGCCGAGGTTAGACTTGG GAGGCAGGGTGAGGGGGCTATAGGGAAGTGGGAGGAGAAAGTGAGGGTTC CGAGGTGGGAGGAGAATATGGATGCGTTGGAGATGAAGGATACCGTTACT GCTGAGGGGACGGGGGTAGAGGTGGAAGAGAGCTGA
back to top

Coding sequence (CDS) from alignment at ch4:2939487..2940122+

>KYF_005188-T1 ID=KYF_005188-T1|Name=KYF_005188-T1|organism=Aspergillus niger KYF3|type=CDS|length=636bp|location=Sequence derived from alignment at ch4:2939487..2940122+ (Aspergillus niger KYF3)
ATGTCCACCCTCGACGACATCTTCGGCTCCTCCCCGCCTCCCACAACCCA
CCACGCTCACCCCAACCCGCCCACCACCACCGAACCCTCCGACCTCCCCT
CCCTCCGCCGCCAACACGTCACAGCCGGCTACCGCGACGGCATCAGCGCC
TCCAAAACCTCCCATGTCCAAGCCGGCTTTGACGCCGGCTTTCCCATCGG
CGCACAACTCGGCATGCGCGCTGGTACTATCCTCGGTATTCTCGAGGGTG
TGCTGCGCGGTTACGACGAGAGCCAGAAAGCCGTGGTGAAGAAGCTGCCT
GCGGGTCGGAAGGGCGCCACCAGCACCAATGGCACCGCCACTCCTACTTC
TACAATGACCGACGAGGAACGCCAAGCTAAGCGAGCAGAGATACTAGCAT
TGTACCAACAAGCCGTGAAGGAATTGGATGTGCGGAAGGTATTCGAGGGG
ATCAGTGAGAAGGAAATCTCAGGGGGAGAAAAGGCCGAGGTTAGACTTGG
GAGGCAGGGTGAGGGGGCTATAGGGAAGTGGGAGGAGAAAGTGAGGGTTC
CGAGGTGGGAGGAGAATATGGATGCGTTGGAGATGAAGGATACCGTTACT
GCTGAGGGGACGGGGGTAGAGGTGGAAGAGAGCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YAE1KYF_005188Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005188-T1.exon1KYF_005188-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005188-T1.cdsKYF_005188-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005188-T1KYF_005188-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019191
DBxrefPFAM:PF09811
Product N terminal
ProductEssential protein Yae1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2939487..2940122 +