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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3133173..3134431+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005250-T1 ID=KYF_005250-T1|Name=KYF_005250-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1259bp|location=Sequence derived from alignment at ch4:3133173..3134431+ (Aspergillus niger KYF3)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTGTACTTCCCCC
TCCCTCCCCCTCAACCCTATCCCCCCCAACCACAATACTAACAAGTAAAC
CCAGATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTC
TCGCGGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAA
TCATCCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAA
GGGCACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACT
CGACCGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCC
TGCGCCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAA
CACATACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGG
ATCGGTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGG
CCAGGATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATT
GAGTAGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGGTGTTTTTGT
TCGAGGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTC
TCCTCTTGA back to topCoding sequence (CDS) from alignment at ch4:3133173..3134431+ >KYF_005250-T1 ID=KYF_005250-T1|Name=KYF_005250-T1|organism=Aspergillus niger KYF3|type=CDS|length=2388bp|location=Sequence derived from alignment at ch4:3133173..3134431+ (Aspergillus niger KYF3)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTATCTACATCGG
CAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCAAACCG
ACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCGTC
CTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACAAC
AGTCCGGAACAACTACGGCGTATACATCCACGACTCGACCGTAAACGCAG
CGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCAGA
CCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACATACGAAGACGG
GAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAAAA
ACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACCTC
ACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAGGA
GGAGAGGTATCGGGATCCGAGCAGGGTGTTTTTGTTCGAGGATGGAAGGG
AGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGAATGCTC
CTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTCAGCAGC
CATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCGAGAAAT
GCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCCAACACC
CACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAATGCCCT
CCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCTCCTACA
ATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTGGGCCAG
CAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGTCAACCT
CACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACAACGTCT
GGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTCACCGGC
TCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGGGAACAC
TGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGCCGTACT
CTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGAGGGTTT
TACTACTGCGGGTTCTACTCTTACCAGGATACTATCTACATCGGCAAACT
CGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCAAACCGACTTCC
TATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCGTCCTCCGC
TCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACAACAGTCCG
GAACAACTACGGCGTATACATCCACGACTCGACCGTAAACGCAGCGAACA
CCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCAGACCGTGG
AACTCACTGCACCGATCCATCTTCGCGAACACATACGAAGACGGGAGCAT
CGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAAAAACGAGA
CGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACCTCACAGGG
AGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAGGAGGAGAG
GTATCGGGATCCGAGCAGGGTGTTTTTGTTCGAGGATGGAAGGGAGGGCA
ATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000070 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF01095 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3133173..3134431 + |
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