You are here

Home

KYF_005275-T1, KYF_005275-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005275-T1
Unique NameKYF_005275-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3189912..3190982+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005275-T1 ID=KYF_005275-T1|Name=KYF_005275-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch4:3189912..3190982+ (Aspergillus niger KYF3)
ATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCCGTCGA
CCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGGAGCTA
CCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCGGGGTG
GAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCGGCAAA
GACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGTATGGC
AGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACCGGGTG
AACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGAATATG
GAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATTGCAGG
TCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGAAACTA
AGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTATCCAG
CCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCAGCCGT
TGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGCAGTAT
GGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCTGGTCT
TGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGTAAGCC
CTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCTACGAG
CGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCGGAGCA
AGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTCGCATG
GGAAATGTTGGCGGAGTGATGGATATCTAGAGTGAGTGCTGCTCTGCTGG
GATGGTTTCTGCGTGTCTTTGCGGCGTGTTTGCTAATATTAGGGCAGTGA
ATCTGTGGCGTTAACAACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAG
CGTGGACGGAGATCATGAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAG
GAGTCAATCAGGGGGTGGTAA
back to top

Coding sequence (CDS) from alignment at ch4:3189912..3190982+

>KYF_005275-T1 ID=KYF_005275-T1|Name=KYF_005275-T1|organism=Aspergillus niger KYF3|type=CDS|length=2010bp|location=Sequence derived from alignment at ch4:3189912..3190982+ (Aspergillus niger KYF3)
ATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCCGTCGA
CCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGGAGCTA
CCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCGGGGTG
GAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCGGCAAA
GACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGTATGGC
AGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACCGGGTG
AACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGAATATG
GAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATTGCAGG
TCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGAAACTA
AGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTATCCAG
CCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCAGCCGT
TGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGCAGTAT
GGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCTGGTCT
TGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGTAAGCC
CTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCTACGAG
CGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCGGAGCA
AGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTCGCATG
GGAAATGTTGGCGGAGTGATGGATATCTAGATGAATCTGTGGCGTTAACA
ACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAGCGTGGACGGAGATCAT
GAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAGGAGTCAATCAGGGGGT
GGTAAATGGCTAGCCTTCTCCGTTTACTACGCACCCAGTATAACCCGCCC
GTCGACCCCAGTGGGGTTTCATTTGCAGGAAAAACGGTCATTTTGACCGG
AGCTACCTCCGGACTGGGGTTTGAGGCCGCCGTCAAGCTCCTCAATCTCG
GGGTGGAGTCGCTCATTATAGGGAGCCGGAACCTCCAGCGAGGCCAAGCG
GCAAAGACGGAGCTTGAGAAGCTTACAAACAGACAAGGGGTGATTCAAGT
ATGGCAGCTGGAAATGAACAGCTTCCAGAGCGTCAAAAGTTTTGCAAACC
GGGTGAACGAGGAGCTGCGCCAATTGGACATTGCGTTACTGAACGCCGGA
ATATGGAACCGCGATTTCGGCGTATCGCCCGAGGGATGGGAGGAGACATT
GCAGGTCAATACGTTATCTACTTCCCTATTGGCGCTTTTGCTCCTTCCGA
AACTAAGGAGTAGTTCATCCTTGTCCGACCCGGCTCATCTTACGGTCGTA
TCCAGCCAACAGTTCGTGCGCGTCAAAGCCAAGAGTCTCCGAACGGTGCA
GCCGTTGTTAAAGCATCTGAATAGCCCGCAGTCCTTCAAAGGCCCAAGGC
AGTATGGTATCTCGAAGCTTCTCCTGGAATATGTTCTCAAGACAGTAGCT
GGTCTTGTTCGGAATGAGAACGGCACCGTGCCGGTCATCATCAACACTGT
AAGCCCTGGGTTTTGCGTCTCATCTCTTGGACGGCAGTACAGTAGATTCT
ACGAGCGATGGGCGACGTGGTTGGCTTATAAGCTCTTTGCTCGCACGGCG
GAGCAAGGAAGCCGGTCGTTGGTCAGTGCCACTTATCAGGGGGTGGAGTC
GCATGGGAAATGTTGGCGGAGTGATGGATATCTAGATGAATCTGTGGCGT
TAACAACAGGAGCGGAAGGGAAGCAGTTCCAGGCGAGAGCGTGGACGGAG
ATCATGAACGAGCTGGAGGAGCAGTCTGAGGGGCTGAAGGAGTCAATCAG
GGGGTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005275KYF_005275Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005275-T1.exon1KYF_005275-T1.exon1Aspergillus niger KYF3exon
KYF_005275-T1.exon2KYF_005275-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005275-T1.cdsKYF_005275-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005275-T1KYF_005275-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3189912..3190982 +
Powered by Drupal