You are here

Home

KYF_005315-T1, KYF_005315-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005315-T1
Unique NameKYF_005315-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3305092..3306731+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005315-T1 ID=KYF_005315-T1|Name=KYF_005315-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1640bp|location=Sequence derived from alignment at ch4:3305092..3306731+ (Aspergillus niger KYF3)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGTATGTGCTA
CTAAAACATCTTTTGCTTTATGCTTTTTTTTCTTTTCCTACAAAAGCGAG
TTTGTGGTTTTTATCGATCACTTTGCTGGAGATTGGGGCTCGCTCCCAAG
TCAGCAGAGGAAAGAGAGATAACCGCCACATTCCATCATCGGAACATCTT
TAAAAGAAACAAGCTGACCAGAAACTTCACCTCAATAGGACAGATCGAGA
CTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCC
GAGCTGCTTCGCGGTATGTGATACAAATTTTATCATCGCCCTGGTGGGGT
CTGTGCCAACATGTTCTGACGACGTCCAGGTGTCTACGCCTACGGTTTTG
AGCGTCCCTCCGCTATCCAGCAGCGTGCCATCAAGCCCATCATTGCCGGT
ACGTCTCCCCCCGGCGCGATCGCCCATAATCTATGATGCTAACTAGAGCA
TCCCAGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACT
GCCACTTTCTCCATCTCCGCTCTCCAGAAGATCGACCAGGAGCTCAAGGC
TTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCC
AGAAGGTCGTTGTCGCCATTGGTGACTTCATGAACATTGAGTGCCACGCC
TGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGG
CCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGC
GCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCT
GATGAGATGCTTTCTGTAAGTCCATACCAGATCTGGGCCCAGGGAAGACG
TGCCTTTGCTAATAAATGTGATTAGCGTGGTTTCACCGAGCAAATCTACG
ACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCGCT
ACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGACCC
CATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAAGC
AGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCTCC
GATCTCTACGAGACCGTCACCATCACCCAGGCCGTCATCTTCTGTAACAC
CCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACTTCA
CCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTTATC
ATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGACCT
TCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACTACG
ACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGTGGT
CGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGATGT
CCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGGAGA
TGCCCATGAACGTTGCTGGTAAGCTAGCCTTCACCCACACTCTGATTATC
GTATCTTCCATGCTGATTTTTGGTTCTAGACCTCATCTAA
back to top

Coding sequence (CDS) from alignment at ch4:3305092..3306731+

>KYF_005315-T1 ID=KYF_005315-T1|Name=KYF_005315-T1|organism=Aspergillus niger KYF3|type=CDS|length=7182bp|location=Sequence derived from alignment at ch4:3305092..3306731+ (Aspergillus niger KYF3)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGA
GACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGC
CCGAGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCT
ATCCAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGC
TCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTC
TCCAGAAGATCGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCT
CCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGG
TGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCC
GTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACC
CCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCA
GATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTT
TCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAG
GTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCAC
CAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTA
CCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGG
AAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATCACCCAGGC
CGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGC
TCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAG
GGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGT
CCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCT
CCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCAC
CGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTT
CGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACA
GCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATG
GCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGAC
TAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCG
AGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATC
CAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCA
GGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCC
AGAAGATCGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCC
ACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGGTGA
CTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTG
ACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCC
GGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGAT
GAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCA
CCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTC
ACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAA
GTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCC
TTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAG
CTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATCACCCAGGCCGT
CATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCA
CTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGC
CAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCT
GATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCC
TGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGT
ATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGT
CACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCA
CCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCT
TCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAA
CTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGC
TGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAG
CAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGC
TCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGA
AGATCGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACC
CGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGGTGACTT
CATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACG
ACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGT
CGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAA
GCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCG
AGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACC
CTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTT
CATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTG
AGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTC
GACACCCTCTCCGATCTCTACGAGACCGTCACCATCACCCAGGCCGTCAT
CTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTG
CCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAG
CGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGAT
CGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGG
TCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATC
GGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCAC
CGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCC
AGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCT
AACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTA
CGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGC
TTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAG
CGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCA
GTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGA
TCGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGT
GAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGGTGACTTCAT
GAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACA
TGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGT
ATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCT
CTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGC
AAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTG
CTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCAT
GCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGG
GTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGAC
ACCCTCTCCGATCTCTACGAGACCGTCACCATCACCCAGGCCGTCATCTT
CTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCC
GTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGT
GATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGC
CACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCA
TCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGT
CGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGC
TGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGA
TCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAAC
GACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGA
TGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTC
GCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGT
GCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTC
TGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATCG
ACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAG
TTGGCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGGTGACTTCATGAA
CATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGA
ACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATC
CACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTT
CATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAA
TCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTG
TCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCG
TGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTA
TCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACC
CTCTCCGATCTCTACGAGACCGTCACCATCACCCAGGCCGTCATCTTCTG
TAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTG
ACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGAT
GTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCAC
TGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCA
ACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGT
GGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGA
CGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCG
AGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAACGAC
AAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGATGA
GGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCG
GTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCC
ATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTCTGG
TACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATCGACC
AGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTG
GCTCAGCAGATCCAGAAGGTCGTTGTCGCCATTGGTGACTTCATGAACAT
TGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACG
CCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCAC
GATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCAT
CCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATCACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGACCTCATCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF1KYF_005315Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005315-T1KYF_005315-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005315-T1.exon1KYF_005315-T1.exon1Aspergillus niger KYF3exon
KYF_005315-T1.exon2KYF_005315-T1.exon2Aspergillus niger KYF3exon
KYF_005315-T1.exon3KYF_005315-T1.exon3Aspergillus niger KYF3exon
KYF_005315-T1.exon4KYF_005315-T1.exon4Aspergillus niger KYF3exon
KYF_005315-T1.exon5KYF_005315-T1.exon5Aspergillus niger KYF3exon
KYF_005315-T1.exon6KYF_005315-T1.exon6Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005315-T1.cdsKYF_005315-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producttranslation initiation factor eIF4A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3305092..3306731 +
Powered by Drupal