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KYF_005379-T1, KYF_005379-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005379-T1
Unique NameKYF_005379-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3495264..3496370-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005379-T1 ID=KYF_005379-T1|Name=KYF_005379-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1107bp|location=Sequence derived from alignment at ch4:3495264..3496370- (Aspergillus niger KYF3)
ATGTCTGGATATGACCGAGCTCTTTCAGGTAAGACAAGCTAGCTACGACC
TTGGCTACGGGCCTGGTTGCTGAAGGGATTCCCCATTCTAACCTCTTTGC
AGTCTTCAGGTATGAATCTTTAGCTTCATGAAGCTCTAGCAAACACACCC
TAACCCGCTCCCAGCCCCGATGGGCACGTCTTCCAGGTGGAATACGCCAT
GGAAGCCGTCAAGCGAGGTTCGTCCAACCCCTCCCTCCCTCCGACACCAA
GGGAATCTCCATCCATCGCATCATACTCACTCATTTCCCTTTCAACCTAT
TAGGAACCTGCGCCGTCGGAGTAAAAGGCAAGGACGTGGTCGTTCTCGGC
TGCGAGAAGCGCTCCGCACTGAAGCTCCAAGATACCCGCATCACACCGTC
CAAGATCGCCATGGTGGATAACCACGCCGTCCTGGCTTTCGCCGGCCTGA
ACGCCGACGCCCGCATCCTTATCGACAAAGCCCGTCTAGAAGCTCAGTCC
CACCGTCTGACCGTCGAAGACCCCGTCACTATCGAATACATCACGAAGTA
CATTGCCGGTGTGCAGCAGCGGTACACGCAGAGTGGTGGTGTTAGACCCT
TCGGTATCAGTACCCTGGTCGTGGGTTTCGACCCCAATGATAAGACGCCG
AGGTTATATCAGACTGAGCCTTCGGGGATTTATTCCGCTTGGTGGGTTTA
TTCTCCCTCTCTTGTGTCTTGTGTTGATAGTATGGGGATGGTTTTAAAGC
TGACGATGGTCTGGATATAGGAAAGCAAATGCCATCGGACGCTCCAGCAA
GACTGTGCGCGAGTTCCTCGAACGCAACCACCAGGAGGATATGGATCGCG
AACAGACCATTCAGCTCACCATCAAGTCGCTGTTGGAGGTGGTGCAGACT
GGTGCGAAGAACATCGAGGTGGCTATCATGTCGCCCGGAAAGTCGATCGA
GATGCTCCCGGATGACCAGATCGAGTCGTACGTTAAAAGCATAGAGACGG
AGAAGCAGGAGGAGGCGGCTAAGAAGAAGACGGGTCGCGGCGGCACCACG
ACGGCTGCTATTCTAACACGGCCTGGTGGCGGCGAGGGCAGCGAGAGCCG
GGAGTAG
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Coding sequence (CDS) from alignment at ch4:3495264..3496370-

>KYF_005379-T1 ID=KYF_005379-T1|Name=KYF_005379-T1|organism=Aspergillus niger KYF3|type=CDS|length=4065bp|location=Sequence derived from alignment at ch4:3495264..3496370- (Aspergillus niger KYF3)
GAAAGCAAATGCCATCGGACGCTCCAGCAAGACTGTGCGCGAGTTCCTCG
AACGCAACCACCAGGAGGATATGGATCGCGAACAGACCATTCAGCTCACC
ATCAAGTCGCTGTTGGAGGTGGTGCAGACTGGTGCGAAGAACATCGAGGT
GGCTATCATGTCGCCCGGAAAGTCGATCGAGATGCTCCCGGATGACCAGA
TCGAGTCGTACGTTAAAAGCATAGAGACGGAGAAGCAGGAGGAGGCGGCT
AAGAAGAAGACGGGTCGCGGCGGCACCACGACGGCTGCTATTCTAACACG
GCCTGGTGGCGGCGAGGGCAGCGAGAGCCGGGAGTAGGAACCTGCGCCGT
CGGAGTAAAAGGCAAGGACGTGGTCGTTCTCGGCTGCGAGAAGCGCTCCG
CACTGAAGCTCCAAGATACCCGCATCACACCGTCCAAGATCGCCATGGTG
GATAACCACGCCGTCCTGGCTTTCGCCGGCCTGAACGCCGACGCCCGCAT
CCTTATCGACAAAGCCCGTCTAGAAGCTCAGTCCCACCGTCTGACCGTCG
AAGACCCCGTCACTATCGAATACATCACGAAGTACATTGCCGGTGTGCAG
CAGCGGTACACGCAGAGTGGTGGTGTTAGACCCTTCGGTATCAGTACCCT
GGTCGTGGGTTTCGACCCCAATGATAAGACGCCGAGGTTATATCAGACTG
AGCCTTCGGGGATTTATTCCGCTTGCCCCGATGGGCACGTCTTCCAGGTG
GAATACGCCATGGAAGCCGTCAAGCGAGTCTTCAGATGTCTGGATATGAC
CGAGCTCTTTCAGGAAAGCAAATGCCATCGGACGCTCCAGCAAGACTGTG
CGCGAGTTCCTCGAACGCAACCACCAGGAGGATATGGATCGCGAACAGAC
CATTCAGCTCACCATCAAGTCGCTGTTGGAGGTGGTGCAGACTGGTGCGA
AGAACATCGAGGTGGCTATCATGTCGCCCGGAAAGTCGATCGAGATGCTC
CCGGATGACCAGATCGAGTCGTACGTTAAAAGCATAGAGACGGAGAAGCA
GGAGGAGGCGGCTAAGAAGAAGACGGGTCGCGGCGGCACCACGACGGCTG
CTATTCTAACACGGCCTGGTGGCGGCGAGGGCAGCGAGAGCCGGGAGTAG
GAACCTGCGCCGTCGGAGTAAAAGGCAAGGACGTGGTCGTTCTCGGCTGC
GAGAAGCGCTCCGCACTGAAGCTCCAAGATACCCGCATCACACCGTCCAA
GATCGCCATGGTGGATAACCACGCCGTCCTGGCTTTCGCCGGCCTGAACG
CCGACGCCCGCATCCTTATCGACAAAGCCCGTCTAGAAGCTCAGTCCCAC
CGTCTGACCGTCGAAGACCCCGTCACTATCGAATACATCACGAAGTACAT
TGCCGGTGTGCAGCAGCGGTACACGCAGAGTGGTGGTGTTAGACCCTTCG
GTATCAGTACCCTGGTCGTGGGTTTCGACCCCAATGATAAGACGCCGAGG
TTATATCAGACTGAGCCTTCGGGGATTTATTCCGCTTGCCCCGATGGGCA
CGTCTTCCAGGTGGAATACGCCATGGAAGCCGTCAAGCGAGTCTTCAGAT
GTCTGGATATGACCGAGCTCTTTCAGGAAAGCAAATGCCATCGGACGCTC
CAGCAAGACTGTGCGCGAGTTCCTCGAACGCAACCACCAGGAGGATATGG
ATCGCGAACAGACCATTCAGCTCACCATCAAGTCGCTGTTGGAGGTGGTG
CAGACTGGTGCGAAGAACATCGAGGTGGCTATCATGTCGCCCGGAAAGTC
GATCGAGATGCTCCCGGATGACCAGATCGAGTCGTACGTTAAAAGCATAG
AGACGGAGAAGCAGGAGGAGGCGGCTAAGAAGAAGACGGGTCGCGGCGGC
ACCACGACGGCTGCTATTCTAACACGGCCTGGTGGCGGCGAGGGCAGCGA
GAGCCGGGAGTAGGAACCTGCGCCGTCGGAGTAAAAGGCAAGGACGTGGT
CGTTCTCGGCTGCGAGAAGCGCTCCGCACTGAAGCTCCAAGATACCCGCA
TCACACCGTCCAAGATCGCCATGGTGGATAACCACGCCGTCCTGGCTTTC
GCCGGCCTGAACGCCGACGCCCGCATCCTTATCGACAAAGCCCGTCTAGA
AGCTCAGTCCCACCGTCTGACCGTCGAAGACCCCGTCACTATCGAATACA
TCACGAAGTACATTGCCGGTGTGCAGCAGCGGTACACGCAGAGTGGTGGT
GTTAGACCCTTCGGTATCAGTACCCTGGTCGTGGGTTTCGACCCCAATGA
TAAGACGCCGAGGTTATATCAGACTGAGCCTTCGGGGATTTATTCCGCTT
GCCCCGATGGGCACGTCTTCCAGGTGGAATACGCCATGGAAGCCGTCAAG
CGAGTCTTCAGATGTCTGGATATGACCGAGCTCTTTCAGGAAAGCAAATG
CCATCGGACGCTCCAGCAAGACTGTGCGCGAGTTCCTCGAACGCAACCAC
CAGGAGGATATGGATCGCGAACAGACCATTCAGCTCACCATCAAGTCGCT
GTTGGAGGTGGTGCAGACTGGTGCGAAGAACATCGAGGTGGCTATCATGT
CGCCCGGAAAGTCGATCGAGATGCTCCCGGATGACCAGATCGAGTCGTAC
GTTAAAAGCATAGAGACGGAGAAGCAGGAGGAGGCGGCTAAGAAGAAGAC
GGGTCGCGGCGGCACCACGACGGCTGCTATTCTAACACGGCCTGGTGGCG
GCGAGGGCAGCGAGAGCCGGGAGTAGGAACCTGCGCCGTCGGAGTAAAAG
GCAAGGACGTGGTCGTTCTCGGCTGCGAGAAGCGCTCCGCACTGAAGCTC
CAAGATACCCGCATCACACCGTCCAAGATCGCCATGGTGGATAACCACGC
CGTCCTGGCTTTCGCCGGCCTGAACGCCGACGCCCGCATCCTTATCGACA
AAGCCCGTCTAGAAGCTCAGTCCCACCGTCTGACCGTCGAAGACCCCGTC
ACTATCGAATACATCACGAAGTACATTGCCGGTGTGCAGCAGCGGTACAC
GCAGAGTGGTGGTGTTAGACCCTTCGGTATCAGTACCCTGGTCGTGGGTT
TCGACCCCAATGATAAGACGCCGAGGTTATATCAGACTGAGCCTTCGGGG
ATTTATTCCGCTTGCCCCGATGGGCACGTCTTCCAGGTGGAATACGCCAT
GGAAGCCGTCAAGCGAGTCTTCAGATGTCTGGATATGACCGAGCTCTTTC
AGGAAAGCAAATGCCATCGGACGCTCCAGCAAGACTGTGCGCGAGTTCCT
CGAACGCAACCACCAGGAGGATATGGATCGCGAACAGACCATTCAGCTCA
CCATCAAGTCGCTGTTGGAGGTGGTGCAGACTGGTGCGAAGAACATCGAG
GTGGCTATCATGTCGCCCGGAAAGTCGATCGAGATGCTCCCGGATGACCA
GATCGAGTCGTACGTTAAAAGCATAGAGACGGAGAAGCAGGAGGAGGCGG
CTAAGAAGAAGACGGGTCGCGGCGGCACCACGACGGCTGCTATTCTAACA
CGGCCTGGTGGCGGCGAGGGCAGCGAGAGCCGGGAGTAGGAACCTGCGCC
GTCGGAGTAAAAGGCAAGGACGTGGTCGTTCTCGGCTGCGAGAAGCGCTC
CGCACTGAAGCTCCAAGATACCCGCATCACACCGTCCAAGATCGCCATGG
TGGATAACCACGCCGTCCTGGCTTTCGCCGGCCTGAACGCCGACGCCCGC
ATCCTTATCGACAAAGCCCGTCTAGAAGCTCAGTCCCACCGTCTGACCGT
CGAAGACCCCGTCACTATCGAATACATCACGAAGTACATTGCCGGTGTGC
AGCAGCGGTACACGCAGAGTGGTGGTGTTAGACCCTTCGGTATCAGTACC
CTGGTCGTGGGTTTCGACCCCAATGATAAGACGCCGAGGTTATATCAGAC
TGAGCCTTCGGGGATTTATTCCGCTTGCCCCGATGGGCACGTCTTCCAGG
TGGAATACGCCATGGAAGCCGTCAAGCGAGTCTTCAGATGTCTGGATATG
ACCGAGCTCTTTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRE6KYF_005379Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005379-T1KYF_005379-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005379-T1.cdsKYF_005379-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005379-T1.exon5KYF_005379-T1.exon5Aspergillus niger KYF3exon
KYF_005379-T1.exon4KYF_005379-T1.exon4Aspergillus niger KYF3exon
KYF_005379-T1.exon3KYF_005379-T1.exon3Aspergillus niger KYF3exon
KYF_005379-T1.exon2KYF_005379-T1.exon2Aspergillus niger KYF3exon
KYF_005379-T1.exon1KYF_005379-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteMEROPS:MER0004372
DBxrefInterPro:IPR023332
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR000426
DBxrefPFAM:PF10584
DBxrefPFAM:PF00227
ProductProteasome subunit alpha type-4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3495264..3496370 -
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