|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3872837..3873804- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005492-T1 ID=KYF_005492-T1|Name=KYF_005492-T1|organism=Aspergillus niger KYF3|type=mRNA|length=968bp|location=Sequence derived from alignment at ch4:3872837..3873804- (Aspergillus niger KYF3)
ATGGCCCCCTCTCAGCTCCCCCCGATCTTCAACCCCACCTCCCAGGACAT
TGAGATGCTCCTCGCAGCTCAGTGCCACCTCGGGTCCAAGAACCTCCAGT
CTCACATGGAGCCTTACCTCTGGAAGACTCGCCCCGACGGTGTCAATGTC
ATCAACATTGGCAAGACCTGGTATGTTGATCAGGCGATATATTGCGCGCA
ACTCATTTAGGATCGCTGCCTAACACCGCGCGAAAACTTAGGGAGAAGAT
TCTCCTCGCTGCCCGTATCATCGCCGCCATCGACAACCCGGCCGACATCT
GTGTCATCTCCGCTCGTCCCTACGGCCAGCGTGCTGTCCTGAAGTTCGCC
TCCCACACCGGTGCTACCGCCATTGCTGGTCGTTTCACCCCCGGTAACTT
CACCAACTACATCACCCGCTCTTTCAAGGAGCCCCGCCTGATCATCGTCA
CCGACCCTCGCACCGACGCCCAGGCCATCAAGGAGGCCAGCTACGTCAAC
ATCCCCGTCATTGCCCTTTGCGACACTGACTCCCCCACCGACTTCGTTGA
CGTTGCTATCCCCACCAACAACAAGGGTCGCCACGCCATCGGTCTCGTCT
GGTGGCTCCTTGCCCGTGAGGTCCTCCGCCTCCGTGGTACCCTCGCTTCC
CGTGAGGTTGACTGGGACGTCGTTGTCGACCTGTACTTCTACCGTGACCC
CGAGGCTGAGGAGAACAAGGAGGTCGTCGAGGAGAAGGTTGCCAGCGCTG
AGGAGGTCGGTGCTGGTGCCATCGAGTCCGGCTTCGCTGGTGAGAACTGG
GATGTTGCCGGTGCCGGTGCCGGTGTTCCTGGCACTGCTTTCGCTGCTGC
TAGCGCTGCTGCTGGTGCTGCCAGCTGGGAGGCCGAGGGTGGCGACTGGG
CTGCCAGCTCTGCCGCTCCTGCTGGTGAGAGCTGGGCTGAGGCCCAGCCC
ACCGAGGCTAAGTGGTAA back to topCoding sequence (CDS) from alignment at ch4:3872837..3873804- >KYF_005492-T1 ID=KYF_005492-T1|Name=KYF_005492-T1|organism=Aspergillus niger KYF3|type=CDS|length=1794bp|location=Sequence derived from alignment at ch4:3872837..3873804- (Aspergillus niger KYF3)
GGAGAAGATTCTCCTCGCTGCCCGTATCATCGCCGCCATCGACAACCCGG
CCGACATCTGTGTCATCTCCGCTCGTCCCTACGGCCAGCGTGCTGTCCTG
AAGTTCGCCTCCCACACCGGTGCTACCGCCATTGCTGGTCGTTTCACCCC
CGGTAACTTCACCAACTACATCACCCGCTCTTTCAAGGAGCCCCGCCTGA
TCATCGTCACCGACCCTCGCACCGACGCCCAGGCCATCAAGGAGGCCAGC
TACGTCAACATCCCCGTCATTGCCCTTTGCGACACTGACTCCCCCACCGA
CTTCGTTGACGTTGCTATCCCCACCAACAACAAGGGTCGCCACGCCATCG
GTCTCGTCTGGTGGCTCCTTGCCCGTGAGGTCCTCCGCCTCCGTGGTACC
CTCGCTTCCCGTGAGGTTGACTGGGACGTCGTTGTCGACCTGTACTTCTA
CCGTGACCCCGAGGCTGAGGAGAACAAGGAGGTCGTCGAGGAGAAGGTTG
CCAGCGCTGAGGAGGTCGGTGCTGGTGCCATCGAGTCCGGCTTCGCTGGT
GAGAACTGGGATGTTGCCGGTGCCGGTGCCGGTGTTCCTGGCACTGCTTT
CGCTGCTGCTAGCGCTGCTGCTGGTGCTGCCAGCTGGGAGGCCGAGGGTG
GCGACTGGGCTGCCAGCTCTGCCGCTCCTGCTGGTGAGAGCTGGGCTGAG
GCCCAGCCCACCGAGGCTAAGTGGTAAATGGCCCCCTCTCAGCTCCCCCC
GATCTTCAACCCCACCTCCCAGGACATTGAGATGCTCCTCGCAGCTCAGT
GCCACCTCGGGTCCAAGAACCTCCAGTCTCACATGGAGCCTTACCTCTGG
AAGACTCGCCCCGACGGTGTCAATGTCATCAACATTGGCAAGACCTGGGA
GAAGATTCTCCTCGCTGCCCGTATCATCGCCGCCATCGACAACCCGGCCG
ACATCTGTGTCATCTCCGCTCGTCCCTACGGCCAGCGTGCTGTCCTGAAG
TTCGCCTCCCACACCGGTGCTACCGCCATTGCTGGTCGTTTCACCCCCGG
TAACTTCACCAACTACATCACCCGCTCTTTCAAGGAGCCCCGCCTGATCA
TCGTCACCGACCCTCGCACCGACGCCCAGGCCATCAAGGAGGCCAGCTAC
GTCAACATCCCCGTCATTGCCCTTTGCGACACTGACTCCCCCACCGACTT
CGTTGACGTTGCTATCCCCACCAACAACAAGGGTCGCCACGCCATCGGTC
TCGTCTGGTGGCTCCTTGCCCGTGAGGTCCTCCGCCTCCGTGGTACCCTC
GCTTCCCGTGAGGTTGACTGGGACGTCGTTGTCGACCTGTACTTCTACCG
TGACCCCGAGGCTGAGGAGAACAAGGAGGTCGTCGAGGAGAAGGTTGCCA
GCGCTGAGGAGGTCGGTGCTGGTGCCATCGAGTCCGGCTTCGCTGGTGAG
AACTGGGATGTTGCCGGTGCCGGTGCCGGTGTTCCTGGCACTGCTTTCGC
TGCTGCTAGCGCTGCTGCTGGTGCTGCCAGCTGGGAGGCCGAGGGTGGCG
ACTGGGCTGCCAGCTCTGCCGCTCCTGCTGGTGAGAGCTGGGCTGAGGCC
CAGCCCACCGAGGCTAAGTGGTAAATGGCCCCCTCTCAGCTCCCCCCGAT
CTTCAACCCCACCTCCCAGGACATTGAGATGCTCCTCGCAGCTCAGTGCC
ACCTCGGGTCCAAGAACCTCCAGTCTCACATGGAGCCTTACCTCTGGAAG
ACTCGCCCCGACGGTGTCAATGTCATCAACATTGGCAAGACCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0015935 | small ribosomal subunit |
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023591 |
| DBxref | InterPro:IPR027498 |
| DBxref | InterPro:IPR018130 |
| DBxref | InterPro:IPR032281 |
| DBxref | InterPro:IPR005707 |
| DBxref | InterPro:IPR001865 |
| DBxref | PFAM:PF16122 |
| Product | structural constituent of ribosome |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3872837..3873804 - |
|
