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KYF_005704-T1, KYF_005704-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005704-T1
Unique NameKYF_005704-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4538405..4540909-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005704-T1 ID=KYF_005704-T1|Name=KYF_005704-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2505bp|location=Sequence derived from alignment at ch4:4538405..4540909- (Aspergillus niger KYF3)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATTCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Coding sequence (CDS) from alignment at ch4:4538405..4540909-

>KYF_005704-T1 ID=KYF_005704-T1|Name=KYF_005704-T1|organism=Aspergillus niger KYF3|type=CDS|length=2505bp|location=Sequence derived from alignment at ch4:4538405..4540909- (Aspergillus niger KYF3)
ATGTCCAGTCCAGCTAAAAAACGCAAGAGGGATGATCCCGGATCTACACC
CCAGCGCTCCCGGAGCATAGCGTCGTTCTTCCAGGGCCAGGCAGCCAAGC
AAGCCGAGAAGACGCAGCAGGCATTTGATGCTGTGCCCGAAGTCCCCACG
GAACAAACTCTGTCAGACGAGGCGCTTGCTCGTAAGCTGCAGGCCGAATG
GGATCAGGAGCATGCGCTTTCAAATCCGCAAGTCGACACGCCTAGTGATG
AGCCTATTTCGGCACAATCAATCACAGGCGATAACGATCGGGAACCGGCC
AAAGTGCAGAAGAAAGGCGTCCTGTCACTGCAGTCATCCACAGGCACGGA
GGACACTGTATCTCTTGCAGTTCCTTTCGATCAGAGTCCTATCACGTTCG
ATGCCTCCAAATATGCGCACGAGCTGCAAGGACACTGGGCTTCGGAAGGT
GGCGACGCTTCATACGCCCTCCTGACCAGAGCTTTTGTGCTCGCAAATGC
CACAACCAGTCGCATCAAGATCGTCGATACATTGGTCAATTTTCTCCGCG
TGTTGATTGAGGCCGACCCGTCCAGTGTGCTTCCCGCTGTATGGCTTGCG
ACTAATTCAATATCCCCACCATACGACGAATTGGAGCTTGGACTTGGCGG
GTCCTCGATATCAAAAGCGCTCAAAAAGGTGTACGGACTGAACAGCCAAG
GCCTTAAAACTCTGTACGACAAGCACGGCGATGCTGGCGACGTAGCATTC
GAGGCCAAGAAGAGACAGTCTTTTACATTGATGAAGCCTAAACCGCTTCG
AATCAAAGGTGTCTACCAGTCGCTCAAGAAGATAGCTATGAGCAAAGGGA
GTGGAAGCCAGGAGACAAAGCAAAGGATCGTCGAGAAACTTCTGCAAGAT
GCCCGTGGTGCGGAAGAGAGTCGGTACATTGTTAGAACTCTGGTCCAAAA
TCTACGCATCGGCGCTGTCAAGACTACCATGCTCATTGCACTGGCTAGAG
CATTCCTTTACTCCAAACCAGAGGGAGCGGGATTCTCAATCTACTCTCAG
CGGGAAATGGCACAGATGAAGAAAGAGGAGCTAGCTGAGATCTACGGCAA
CGCAGAAGAGATCGTTAAGGCGTCGTATGCGAGACACCCGGACTACGATG
ACCTCGTCCCCTGCTTGCTTGAAGTCGGAGCTACAGATGAACTTCTTGTC
CGCTGTGGTCTTCAGATACATATTCCGTTGAGACCCATGCTAGGCAGCAT
CACGCGGGATCTGTCAGATATGCTAACGAAGCTGCAAGGGCGCGATTTCA
GCTGTGAATACAAATATGACGGGCAGCGTGCGCAAGTGCATTGCGATGTA
CAAGGCAAAGTATCAATATTCTCCCGTCACTTGGAGAATATGACGGAGAA
ATACCCAGACCTGGTGTCTCTTGTCCCAGAGATAAGAGGAGAAGGCGTAT
CAAGCTTCATCCTCGAAGGGGAGGTAGTTGCCGTTGATCAAGAAACGGGG
GAACTACAGGCTTTTCAGATCCTGACCAATCGCGCGAAGAAGAACGTCGA
TATCGGAGCAATCAAAGTCAACGTGTGTCTGTTTGCCTTTGACCTAATGT
ACCTGAACGGCCAACCACTACTCGACCGATCATTCCGCGAGCGAAGAGAG
CTGCTACGGAGCTTATTCGTGGAAATTCCCAAACGGTTCACCTGGGTGAA
GAGTCTCGACGCCACCTCAGCCGACTCCGAAGCAGTATTAGAGTTTTTCA
AGAGTGCCACAGACACCAAATGCGAAGGCATCATGGTCAAAGTGCTCGAC
AACATGCCAAAACCTGATCTCGAAGGAATTGACACACCAGCTGTCGACAC
TTCCAACGGAACACCCACCACACCCGGCCAACCAACCACCAACATGACAG
ACAACAAACCCTCCAAAAACACCCGCCGAAAAGCCCTCCTCTCCACCTAC
GAGCCTGACAAGCGCCTCGAATCCTGGCTCAAAGTCAAAAAAGACTACAG
CACTTCATCAGAAACTCTGGACCTAATCCCCATAGCCGGCTGGCACGGCC
AAGGCCGCAAAGCGAAATGGTGGTCACCGATCCTCCTTGCGGTTCGAAAC
CCAGAAACCGGAAGTCTCGAAGCCGTAACGAAGTGCATGTCGGGCTTCAC
GGACAAATTCTACCAAGCCAACAAGGACAAGTACGCGGAGGGTACCCCCA
ACGTCATCTCCCGCCCCAGCTACGTCGAATACTACGGCGAGCCGGACGTG
TGGTTCGAACCGCAGGAAGTTTGGGAGATGGCCTTCGCAGATATCACGCT
GAGTCCTACGTACACGGCCGCTCTGGGATTAGTTAGCGATGAACGGGGTC
TGAGTTTGCGGTTTCCTCGATTTCTCAAAGTCAGAGAGGATAAATCGATC
GATGAGGCGACCACGTCTGACTATCTGGCTTATTTGTGGAGGAAACAGTC
GGAACGGACGAAGCAGGAGGGGGGTGAGCCATTGGCTGAGGAGCAGGAAG
AGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003909DNA ligase activity
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003910DNA ligase (ATP) activity
Vocabulary: Biological Process
TermDefinition
GO:0051103DNA ligation involved in DNA repair
GO:0071897DNA biosynthetic process
GO:0006281DNA repair
GO:0006310DNA recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005704KYF_005704Aspergillus niger KYF3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005704-T1.cdsKYF_005704-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005704-T1.exon1KYF_005704-T1.exon1Aspergillus niger KYF3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005704-T1KYF_005704-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR016059
DBxrefInterPro:IPR000977
DBxrefInterPro:IPR036599
DBxrefInterPro:IPR012310
DBxrefInterPro:IPR012309
DBxrefInterPro:IPR012308
DBxrefPFAM:PF04675
DBxrefPFAM:PF01068
DBxrefPFAM:PF04679
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4538405..4540909 -
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