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KYF_005848-T1, KYF_005848-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005848-T1
Unique NameKYF_005848-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5020680..5021913-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005848-T1 ID=KYF_005848-T1|Name=KYF_005848-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1234bp|location=Sequence derived from alignment at ch4:5020680..5021913- (Aspergillus niger KYF3)
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCT
GGCCGCCGCTGCTCCTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCT
CTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGG
TACCACCGTACGTCTTCTCTAGCTCCCATAGTACTCTTCCTACTCCGATT
GGACCAACTAACTCTCTTCCCTCACAGGTCATCTTCGAGGGTGAGACCAC
CTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCG
ACATCACCGTCAAGCAGGCCTCCGGTGCCAAGATCAACTGCGACGGTGCT
CGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAGCCCAAGTT
CTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCT
ACAACACCCCTGTCCAGGGTTTCAGCATTCTGGCCGACCACCTGACCATC
ACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGTCACAACAC
CGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGACGGTGCCA
CCGTCTACAACCAGGATGACTGCCTGGCCATCAACTCGGGTGAGGTATGT
ATATGTCTTGCCCCATCGCGCTGCCACTGTCCCGTAGCCACACGTGATTA
GAGACTGACTAGAACACAGCACATCACCTTCACCAACGGCTACTGTGATG
GTGGCCACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGTGACAACACC
GTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGG
TGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCA
AGTTTGAGGACATCACCCTGTCCGACATCAGCAAGTACGGTATTGTCGTT
GAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAACGGTGT
CAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCT
CTGGTACTGACATCTACATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGG
ACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAA
GAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAA
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Coding sequence (CDS) from alignment at ch4:5020680..5021913-

>KYF_005848-T1 ID=KYF_005848-T1|Name=KYF_005848-T1|organism=Aspergillus niger KYF3|type=CDS|length=3267bp|location=Sequence derived from alignment at ch4:5020680..5021913- (Aspergillus niger KYF3)
CACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCCAT
CGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCATCT
CCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCGCATCAAGACCATC
TACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACCCT
GTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAACG
GCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGTTGAGGACATCACT
TTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTACAT
CCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGATG
TGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGGGCGCT
TCCTGCAGCGATTAAGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAA
GGAATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCA
AGCAGGCCTCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGAC
GGCAAGGGTAGCAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCA
CAAGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTG
TCCAGGGTTTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACC
ATCGACAACTCCGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGA
CATTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACC
AGGATGACTGCCTGGCCATCAACTCGGGTGAGATGCATTTCCTCCAGAAC
GCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCT
CGAGAAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCA
AGTCCTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCCCGCTGGT
GAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCCACATCACCTT
CACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCCATCGGTTCCATCG
GTGGCCGCAGTGACAACACCGTCAACGACGTGACCATCTCCAACTCCAAG
GTGCTCAACTCCCAGAACGGTGTCCGCATCAAGACCATCTACGGCAAGAC
TGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACCCTGTCCGACATCA
GCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAACGGCAGCCCCACC
GGCACGCCCACCAACGGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGT
CACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTACATCCTGTGCGGTT
CCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGC
AAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGA
TTAAGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGAAGG
GTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCCTCC
GGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAG
CAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCGACC
AGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGTTTC
AGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTC
CGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGACATTGGCCAGA
GTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGACTGC
CTGGCCATCAACTCGGGTGAGATGCATTTCCTCCAGAACGCCGTTGTGGC
CGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAGAAGCGCT
CCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTCCTCTTGC
TCCACCATCACCCTCGACAACATCGCGGTCCCCGCTGGTGAGACTCTTGA
CTTGACTGGCCTCAAGAAGGGTACCACCCACATCACCTTCACCAACGGCT
ACTGTGATGGTGGCCACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGT
GACAACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTC
CCAGAACGGTGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCG
AGAACGTCAAGTTTGAGGACATCACCCTGTCCGACATCAGCAAGTACGGT
ATTGTCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCAC
CAACGGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCG
TCAAGAGCTCTGGTACTGACATCTACATCCTGTGCGGTTCCGGCAGCTGC
TCGAACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAG
CAAGTGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAAGTCATCT
TCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTGATC
TCCATGTCCGGTACCGACATCACCGTCAAGCAGGCCTCCGGTGCCAAGAT
CAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCA
AGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGCATC
ACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGTTTCAGCATTCTGGC
CGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCA
GCAAGGGTCACAACACCGATGCCTTTGACATTGGCCAGAGTACCTACATC
ACCATTGACGGTGCCACCGTCTACAACCAGGATGACTGCCTGGCCATCAA
CTCGGGTGAGATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGG
GCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAGAAGCGCTCCTGCACTTTC
ACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCAC
CCTCGACAACATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCC
TCAAGAAGGGTACCACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005848KYF_005848Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005848-T1KYF_005848-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005848-T1.cdsKYF_005848-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005848-T1.exon3KYF_005848-T1.exon3Aspergillus niger KYF3exon
KYF_005848-T1.exon2KYF_005848-T1.exon2Aspergillus niger KYF3exon
KYF_005848-T1.exon1KYF_005848-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5020680..5021913 -
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