You are here

Home

KYF_005895-T1, KYF_005895-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005895-T1
Unique NameKYF_005895-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5145616..5146453-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005895-T1 ID=KYF_005895-T1|Name=KYF_005895-T1|organism=Aspergillus niger KYF3|type=mRNA|length=838bp|location=Sequence derived from alignment at ch4:5145616..5146453- (Aspergillus niger KYF3)
ATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCG
GCCGTCGTGTGAGATTCCCGCAAGCCTCCCCAAGAAAAGTTTTTTATATC
CTGACTTCGATGCCGTACAGTAGGTCTGTCGACGCCATTCACGGCTTTCC
CTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGATTGGCTTACC
CCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCCGCATGTCGC
AACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTGATTATGGCT
TGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCGTTGAAAATT
GCGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTACACATTGTA
CAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCAACGAACAAC
GTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCGAAGGTTGGC
GTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGAAAAGGTCGC
CAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGGTACGTTACATC
CACCTGATGATATTCTCCAATTATCAACATACGGTAAACTAATTATACAA
CGGCTGCAGGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTT
GGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGC
ACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCT
CGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAA
back to top

Coding sequence (CDS) from alignment at ch4:5145616..5146453-

>KYF_005895-T1 ID=KYF_005895-T1|Name=KYF_005895-T1|organism=Aspergillus niger KYF3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch4:5145616..5146453- (Aspergillus niger KYF3)
GCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACG
AAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAG
CCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCTCGACCTCGT
CCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCGACGCCATTCA
CGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGAT
TGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCC
GCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTG
ATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCG
TTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTA
CACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCA
ACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCG
AAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGA
AAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGATG
GGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCGGCC
GTCGTGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGAC
TGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGC
AGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCTCGAC
CTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCGACGCC
ATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCC
TCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGT
CGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTG
GGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTG
CCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGGGTATG
AACTACACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAA
GGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGA
CGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTG
CACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCC
CGATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTC
CGGCCGTCGTGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGT
TGGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCG
CACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACC
TCGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCG
ACGCCATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCC
TGCCCTCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTA
AGGGTCGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTC
GTCTGGGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCC
CGCTGCCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGG
GTATGAACTACACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTAC
ACCAAGGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTA
CTGGACGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTG
ATCTGCACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAG
CTGCCCGATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCT
TCCTCCGGCCGTCGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005895KYF_005895Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005895-T1KYF_005895-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005895-T1.cdsKYF_005895-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005895-T1.exon3KYF_005895-T1.exon3Aspergillus niger KYF3exon
KYF_005895-T1.exon2KYF_005895-T1.exon2Aspergillus niger KYF3exon
KYF_005895-T1.exon1KYF_005895-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264T3S
DBxrefInterPro:IPR020798
DBxrefInterPro:IPR016180
DBxrefInterPro:IPR036920
DBxrefInterPro:IPR000114
DBxrefPFAM:PF00252
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5145616..5146453 -
Powered by Drupal