You are here

Home

KYF_005954-T1, KYF_005954-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005954-T1
Unique NameKYF_005954-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5328461..5329460-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005954-T1 ID=KYF_005954-T1|Name=KYF_005954-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1000bp|location=Sequence derived from alignment at ch4:5328461..5329460- (Aspergillus niger KYF3)
ATGGCCAACGAACGCATCACCTGGATCGGCCTGGGCAACATCGGCCGCGT
AAGTCCCCCATCTGCCCCTCATTGCATCACCACCCTTGCTCCCACCATCA
ACTAGACAACTAACCATCAAATTCAAGGCCATGGCCGCCAACATCGCCCA
AAAAGGACCCCAAACCGCCCCAGTAACCCTCTACAACCGCACTACCAGCA
AAGCCACCGACTTCGCCTCGACCCTCCCCGCCAACAAAGCCACCGTCAGC
ACCTCCCTCTCCGACGCCATCTCCAACTCCACCATAATCTTCATCTGCGT
TGGCGACGACGCCGCCCTCGAAGCCATCATCTCCGGACTCCCCACCGCCT
CCCTCTCCTCCAAGATCATCGTCGACTGCTCCACCGTCCACCCCGACACC
TCCCGCAAGATCCAGCGCCAGCTCGCCTCCCACGGCGCCTCCTTCATCGC
CTGCCCGGTCTTCGGCGCCCCCGCCGCCGCCATTGCCGGCCAACTCGTCG
TCGTCCCCGCCGGTGACGCCGCCACGATCGACCGCATCAAGCCCTTCCTG
GACGGGGTTACTTCCAAGGCGACGATCTCCATGGCGGGAGAGGACGTGGG
CCGCGCCACGACGCTGAAGATTCTCGGAAATACGTTTATCTTGAATACCG
TGGAGACGGTGGCAGAGGGGTTGGTTACGGCGGAGAAGACGGGTTTGGGC
GCGGATGTGTATCAGCAGTTCTTGCATACGTTTTTCCCGGGGCCGTTTGC
GTTGTATGCTGATCGCATGGTTACGGGAGATTATCATACTAGGGAGGAGC
CGTTGTTTGCGGTGGATTTGGCCAGGAAGGATTTGAGACATGCTAGTAGT
TTGGCTGGGGAGGCGGGGGTCAGGTTGAGGAGTGTGGAGGTTACGGATCA
TCATTTGCAGACTGTTAAGGCGGAGAAGGGGGAGAAGGGTGATATTGCGG
CGGTTTATGGATCGGTGAGGAAGGAGTCGGGCTTGCCTTTTGAGAACTAG
back to top

Coding sequence (CDS) from alignment at ch4:5328461..5329460-

>KYF_005954-T1 ID=KYF_005954-T1|Name=KYF_005954-T1|organism=Aspergillus niger KYF3|type=CDS|length=1842bp|location=Sequence derived from alignment at ch4:5328461..5329460- (Aspergillus niger KYF3)
GCCATGGCCGCCAACATCGCCCAAAAAGGACCCCAAACCGCCCCAGTAAC
CCTCTACAACCGCACTACCAGCAAAGCCACCGACTTCGCCTCGACCCTCC
CCGCCAACAAAGCCACCGTCAGCACCTCCCTCTCCGACGCCATCTCCAAC
TCCACCATAATCTTCATCTGCGTTGGCGACGACGCCGCCCTCGAAGCCAT
CATCTCCGGACTCCCCACCGCCTCCCTCTCCTCCAAGATCATCGTCGACT
GCTCCACCGTCCACCCCGACACCTCCCGCAAGATCCAGCGCCAGCTCGCC
TCCCACGGCGCCTCCTTCATCGCCTGCCCGGTCTTCGGCGCCCCCGCCGC
CGCCATTGCCGGCCAACTCGTCGTCGTCCCCGCCGGTGACGCCGCCACGA
TCGACCGCATCAAGCCCTTCCTGGACGGGGTTACTTCCAAGGCGACGATC
TCCATGGCGGGAGAGGACGTGGGCCGCGCCACGACGCTGAAGATTCTCGG
AAATACGTTTATCTTGAATACCGTGGAGACGGTGGCAGAGGGGTTGGTTA
CGGCGGAGAAGACGGGTTTGGGCGCGGATGTGTATCAGCAGTTCTTGCAT
ACGTTTTTCCCGGGGCCGTTTGCGTTGTATGCTGATCGCATGGTTACGGG
AGATTATCATACTAGGGAGGAGCCGTTGTTTGCGGTGGATTTGGCCAGGA
AGGATTTGAGACATGCTAGTAGTTTGGCTGGGGAGGCGGGGGTCAGGTTG
AGGAGTGTGGAGGTTACGGATCATCATTTGCAGACTGTTAAGGCGGAGAA
GGGGGAGAAGGGTGATATTGCGGCGGTTTATGGATCGGTGAGGAAGGAGT
CGGGCTTGCCTTTTGAGAACTAGATGGCCAACGAACGCATCACCTGGATC
GGCCTGGGCAACATCGGCCGCGCCATGGCCGCCAACATCGCCCAAAAAGG
ACCCCAAACCGCCCCAGTAACCCTCTACAACCGCACTACCAGCAAAGCCA
CCGACTTCGCCTCGACCCTCCCCGCCAACAAAGCCACCGTCAGCACCTCC
CTCTCCGACGCCATCTCCAACTCCACCATAATCTTCATCTGCGTTGGCGA
CGACGCCGCCCTCGAAGCCATCATCTCCGGACTCCCCACCGCCTCCCTCT
CCTCCAAGATCATCGTCGACTGCTCCACCGTCCACCCCGACACCTCCCGC
AAGATCCAGCGCCAGCTCGCCTCCCACGGCGCCTCCTTCATCGCCTGCCC
GGTCTTCGGCGCCCCCGCCGCCGCCATTGCCGGCCAACTCGTCGTCGTCC
CCGCCGGTGACGCCGCCACGATCGACCGCATCAAGCCCTTCCTGGACGGG
GTTACTTCCAAGGCGACGATCTCCATGGCGGGAGAGGACGTGGGCCGCGC
CACGACGCTGAAGATTCTCGGAAATACGTTTATCTTGAATACCGTGGAGA
CGGTGGCAGAGGGGTTGGTTACGGCGGAGAAGACGGGTTTGGGCGCGGAT
GTGTATCAGCAGTTCTTGCATACGTTTTTCCCGGGGCCGTTTGCGTTGTA
TGCTGATCGCATGGTTACGGGAGATTATCATACTAGGGAGGAGCCGTTGT
TTGCGGTGGATTTGGCCAGGAAGGATTTGAGACATGCTAGTAGTTTGGCT
GGGGAGGCGGGGGTCAGGTTGAGGAGTGTGGAGGTTACGGATCATCATTT
GCAGACTGTTAAGGCGGAGAAGGGGGAGAAGGGTGATATTGCGGCGGTTT
ATGGATCGGTGAGGAAGGAGTCGGGCTTGCCTTTTGAGAACTAGATGGCC
AACGAACGCATCACCTGGATCGGCCTGGGCAACATCGGCCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0050661NADP binding
GO:0051287NAD binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005954KYF_005954Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005954-T1KYF_005954-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005954-T1.cdsKYF_005954-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005954-T1.exon2KYF_005954-T1.exon2Aspergillus niger KYF3exon
KYF_005954-T1.exon1KYF_005954-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR006115
DBxrefInterPro:IPR029154
DBxrefInterPro:IPR015815
DBxrefPFAM:PF01488
DBxrefPFAM:PF03446
DBxrefPFAM:PF14833
DBxrefPFAM:PF03807
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5328461..5329460 -
Powered by Drupal