You are here

Home

KYF_005965-T1, KYF_005965-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_005965-T1
Unique NameKYF_005965-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5357421..5358839+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_005965-T1 ID=KYF_005965-T1|Name=KYF_005965-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1419bp|location=Sequence derived from alignment at ch4:5357421..5358839+ (Aspergillus niger KYF3)
ATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCAC
ATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGC
AATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTC
GTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTATGTGAATT
GCACGCATAGGTAATAGTCTCGCTGACGGATTACCAAGGTGTATCGCCAT
CTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATGTAAGCGC
ACGCTATCTACGTCCACCTACGACATTGCAGACTGCGACTAACACATCTC
ATTTGCTCAGCGCTCCATAATCCGTCTAGGGATTCTACTACTCCTATTTG
ACGTCTACTTGACATGGGCACGGATTGAGAAATCTCCATCACTCGCAACC
ACCTTCCTTTCGCGCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAG
CCTGAATGCGCTGGCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGG
CATCGATCCTGGCCCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCAT
GGCAATGCGACAGAGGCGCCTATCTTCTCCAATCCCTCCACACCCATACT
CCCATCATTCCCGTCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTA
CGCCAGCATCGACACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCC
AACGATGTATCAACAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCT
CCCTCCTACAACCCCACAAGGATCTTTCACCACCCTCCCACCACCTCTCC
GACGTGCCTCCACCGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCC
TCACCAGCCAGCCCAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTG
CGCGAAGCTCTTCCCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCG
GAAATGCGTCCAATGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGT
AGCCAGACAACCGTCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCC
CACGGCGACCCTCACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTC
TGCCTGGTTCGTCCTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAG
TCTGTACCTACCAGCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCT
ACTCTCTCTGGGCGCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCG
AAGCATTGTATATCCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTA
GCAGTGGCAGGGTTGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGG
GGCAGTTGGAGTTGGTTAA
back to top

Coding sequence (CDS) from alignment at ch4:5357421..5358839+

>KYF_005965-T1 ID=KYF_005965-T1|Name=KYF_005965-T1|organism=Aspergillus niger KYF3|type=CDS|length=3906bp|location=Sequence derived from alignment at ch4:5357421..5358839+ (Aspergillus niger KYF3)
ATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCAC
ATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGC
AATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTC
GTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGCCA
TCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTCCA
TAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACATGG
GCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGCGC
GCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGCGA
CTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCCCA
ACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAGGC
GCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTCGC
AGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACACTG
AGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACAGT
AGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCCAC
AAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCGCC
CCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCAAC
CGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCCCA
TCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATGTT
TCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTCAT
GCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCACCG
CAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCTCG
CTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGCTA
TCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGCGG
CGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCCTG
CTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTGGC
TGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGGTT
AAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGC
ACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGAC
GCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATT
TCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGC
CATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTC
CATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACAT
GGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGC
GCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGC
GACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCC
CAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAG
GCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTC
GCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACAC
TGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACA
GTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCC
ACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCG
CCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCA
ACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCC
CATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATG
TTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTC
ATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCAC
CGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCT
CGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGC
TATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGC
GGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCC
TGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTG
GCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGG
TTAAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACA
GCACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTG
ACGCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGA
TTTCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATC
GCCATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGC
TCCATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGAC
ATGGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGC
GCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTG
GCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGC
CCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAG
AGGCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCG
TCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGAC
ACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAA
CAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACC
CCACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCAC
CGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCC
CAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTC
CCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAA
TGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCG
TCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTC
ACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTC
CTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCA
GCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGC
GCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATAT
CCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGT
TGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTT
GGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0032366intracellular sterol transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_005965KYF_005965Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005965-T1.exon1KYF_005965-T1.exon1Aspergillus niger KYF3exon
KYF_005965-T1.exon2KYF_005965-T1.exon2Aspergillus niger KYF3exon
KYF_005965-T1.exon3KYF_005965-T1.exon3Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_005965-T1.cdsKYF_005965-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_005965-T1KYF_005965-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007290
DBxrefPFAM:PF04161
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5357421..5358839 +
Powered by Drupal