You are here

Home

KYF_006239-T1, KYF_006239-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006239-T1
Unique NameKYF_006239-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6182629..6183204+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006239-T1 ID=KYF_006239-T1|Name=KYF_006239-T1|organism=Aspergillus niger KYF3|type=mRNA|length=576bp|location=Sequence derived from alignment at ch4:6182629..6183204+ (Aspergillus niger KYF3)
ATGTCGCCCTCCCTCCATCCTCTCCTCGACAACGGCATCACCAAAGGGGA
CCCTAACTTCCCTGGCGGTAACCTCTACTGCAAATGCTCCTCCGACAAGG
TGGTGGTTAAGCTGGCCAGCAATGTCGCTCACAATCACGCCTGTGGCTGC
TCTAAGTGCTGGAAGCCCGCCGGATCGTTGTTTTCCATCGTCGGAGTAGT
TCCCCGCGACGCCGTCTCCGTCACCGAACACGCAGAGAAGTTGTCCATCG
TGGACGCGTCCGCCGCTATCCAGAGATACGCCTGCAAGGGCTGCGGGGTA
CACATGTTCGGTCGCATCGAGAAAGACCACCCTTTCAAGGGCCTGGACTT
TGTGCACGCCGAGCTGTCCGACCAGAAGGGCTGGCAGGAGCCTCAGTTCG
CGGGATTCGTCTCCTCCATCATCGAGCAGGGCTTCCACCCCAAGGGCATG
GAGGAAGTGCGCTCCAAGTTCCACTCCCTGGGTCTCGAGACATACGACGC
GCTGTCGCCGGCATTGATGGATCTGATTGCCACCTTCACGGCTCAAAGGG
CGGGGGTGTTGTCTGCGAACCTCTAA
back to top

Coding sequence (CDS) from alignment at ch4:6182629..6183204+

>KYF_006239-T1 ID=KYF_006239-T1|Name=KYF_006239-T1|organism=Aspergillus niger KYF3|type=CDS|length=576bp|location=Sequence derived from alignment at ch4:6182629..6183204+ (Aspergillus niger KYF3)
ATGTCGCCCTCCCTCCATCCTCTCCTCGACAACGGCATCACCAAAGGGGA
CCCTAACTTCCCTGGCGGTAACCTCTACTGCAAATGCTCCTCCGACAAGG
TGGTGGTTAAGCTGGCCAGCAATGTCGCTCACAATCACGCCTGTGGCTGC
TCTAAGTGCTGGAAGCCCGCCGGATCGTTGTTTTCCATCGTCGGAGTAGT
TCCCCGCGACGCCGTCTCCGTCACCGAACACGCAGAGAAGTTGTCCATCG
TGGACGCGTCCGCCGCTATCCAGAGATACGCCTGCAAGGGCTGCGGGGTA
CACATGTTCGGTCGCATCGAGAAAGACCACCCTTTCAAGGGCCTGGACTT
TGTGCACGCCGAGCTGTCCGACCAGAAGGGCTGGCAGGAGCCTCAGTTCG
CGGGATTCGTCTCCTCCATCATCGAGCAGGGCTTCCACCCCAAGGGCATG
GAGGAAGTGCGCTCCAAGTTCCACTCCCTGGGTCTCGAGACATACGACGC
GCTGTCGCCGGCATTGATGGATCTGATTGCCACCTTCACGGCTCAAAGGG
CGGGGGTGTTGTCTGCGAACCTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0046294formaldehyde catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0051907S-(hydroxymethyl)glutathione synthase activity
GO:0008270zinc ion binding
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006239KYF_006239Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006239-T1.exon1KYF_006239-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006239-T1.cdsKYF_006239-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006239-T1KYF_006239-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR014185
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6182629..6183204 +
Powered by Drupal