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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:138844..139950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006313-T1 ID=KYF_006313-T1|Name=KYF_006313-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1107bp|location=Sequence derived from alignment at ch5:138844..139950+ (Aspergillus niger KYF3)
ATGACCATCTCAACTACTACTACCAGCAACCAAGACCCCCTCCCCCTCCC
ACCCCCCTTCAGCACCATCCCCCGACACGTCCTCACCTTCGGCCCCTCCC
CGATCCACGCCCTCCCGCTCATCACCTCCGCCCTCTCCCCCCCAAACCCA
TCAACAACCATCTACGCCAAACGCGACGACCTATCCTCCCCTCTCGCCTC
CGGAGGCGGCAACAAGACCCGCAAACTAGAATACCTGATCCCGGACGCCC
TCTCCAGCGGTTCGACAACCCTAATCTCCATCGGGGGGATCCAATCAAAC
CATACCCGGCAAGTCGCCGCGGCCGCCACAGTGACGGGCTTGAAATGTCG
GGTGATCCAAGAAGACTGGGTTCCCTGGAATGACGCGCACTACAGCAAGG
TGGGGAACATCCAGCTATCGAGACTCATGGGGGCGGATGTACGGCTTGAT
CCATCGGGGTTTGGGATCGAGCATAAGAGTACGTTGAAGAAGCTGGAAGA
GGAGTGTATCGCCGCAGGCGAGAAACCGTATTATATCCCTGCGGGCGCGT
CGGATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTGGGCGTTTGAGGTG
CGGGCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGACGGTGGTGGTTTG
TGCGGTGACGGGGAGTACGATGGCGGGGATGGTGGCGGGGTTTAAGTTGT
TGGAGAAGTTGGATCGGGAGGCAGGGAATGGGAGGGGGAAGACGAGGGTG
GTGGGGATTGATGCGAGTGCGAAGCCGAAGGAGACGAGGGAGCAGGTGTT
GCGGATTGCGAAGGAGACGGCGGAGAGGATTGGGTTGGGGAGGGAGGAGG
TATCGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCATGGGGGTGTGTAT
GGAGTGCCGGATAAGAGGACGTGGGAGGCGATTGAGTTTGCGGCGAAGAC
GGAGGCGTTTATTACGGATCCGGTGTATGAGGGGAAGAGTTTTGCGGGGA
TGATGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAATATTCTGTTTGCG
CATTTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGGATTTGGGGAAGAC
GCAGTAG back to topCoding sequence (CDS) from alignment at ch5:138844..139950+ >KYF_006313-T1 ID=KYF_006313-T1|Name=KYF_006313-T1|organism=Aspergillus niger KYF3|type=CDS|length=1107bp|location=Sequence derived from alignment at ch5:138844..139950+ (Aspergillus niger KYF3)
ATGACCATCTCAACTACTACTACCAGCAACCAAGACCCCCTCCCCCTCCC
ACCCCCCTTCAGCACCATCCCCCGACACGTCCTCACCTTCGGCCCCTCCC
CGATCCACGCCCTCCCGCTCATCACCTCCGCCCTCTCCCCCCCAAACCCA
TCAACAACCATCTACGCCAAACGCGACGACCTATCCTCCCCTCTCGCCTC
CGGAGGCGGCAACAAGACCCGCAAACTAGAATACCTGATCCCGGACGCCC
TCTCCAGCGGTTCGACAACCCTAATCTCCATCGGGGGGATCCAATCAAAC
CATACCCGGCAAGTCGCCGCGGCCGCCACAGTGACGGGCTTGAAATGTCG
GGTGATCCAAGAAGACTGGGTTCCCTGGAATGACGCGCACTACAGCAAGG
TGGGGAACATCCAGCTATCGAGACTCATGGGGGCGGATGTACGGCTTGAT
CCATCGGGGTTTGGGATCGAGCATAAGAGTACGTTGAAGAAGCTGGAAGA
GGAGTGTATCGCCGCAGGCGAGAAACCGTATTATATCCCTGCGGGCGCGT
CGGATCATCCGTTGGGTGGGTTGGGGTTCGCGCGGTGGGCGTTTGAGGTG
CGGGCTCAGGAGAAGGAGTTGGGGGTGGAGTTTGGGACGGTGGTGGTTTG
TGCGGTGACGGGGAGTACGATGGCGGGGATGGTGGCGGGGTTTAAGTTGT
TGGAGAAGTTGGATCGGGAGGCAGGGAATGGGAGGGGGAAGACGAGGGTG
GTGGGGATTGATGCGAGTGCGAAGCCGAAGGAGACGAGGGAGCAGGTGTT
GCGGATTGCGAAGGAGACGGCGGAGAGGATTGGGTTGGGGAGGGAGGAGG
TATCGGAGGAGGATGTGGAGTTGTGGGAGGAGTGGCATGGGGGTGTGTAT
GGAGTGCCGGATAAGAGGACGTGGGAGGCGATTGAGTTTGCGGCGAAGAC
GGAGGCGTTTATTACGGATCCGGTGTATGAGGGGAAGAGTTTTGCGGGGA
TGATGGATTTGGTCAAGAGGGGGGAGATTCAGGGGAATATTCTGTTTGCG
CATTTGGGAGGGCAGTTGGCGTTGAATGCTTATTCGGATTTGGGGAAGAC
GCAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030170 | pyridoxal phosphate binding |
| GO:0008660 | 1-aminocyclopropane-1-carboxylate deaminase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009310 | amine catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR027278 |
| DBxref | InterPro:IPR005965 |
| DBxref | InterPro:IPR001926 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:138844..139950 + |
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