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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:678622..680457- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006467-T1 ID=KYF_006467-T1|Name=KYF_006467-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1836bp|location=Sequence derived from alignment at ch5:678622..680457- (Aspergillus niger KYF3)
ATGGCTGGTGACAACCCCCCCGCTGCTGGGGAGCCGGCCATGCCCACCCG
AATTTCTTACTGGCGCCTTCTGCTCGACCAGGGCGTGCTTACCCAAGAAA
TCCTCGATTATCCATGGGAGGGCTCTGGCACGGAAGACGACCCATACCTC
GTCACCTGGATTCCTAACGATCCTCGCAATCCCATGAATTTCCCCGCCTG
GCGCAAATGGCTGTATACTATAACCGTGGCTTGGGCCACACTCGCTGTGT
CATTGGTCTCGTCAGCGTACAGTGGAGGAGTCGAGCAAATAATGGAAAGT
TTTCATGTGGGCACTGAGGTAGCCACGCTCGGCATTTCGCTCTTCGTGCT
GGGCTTCGCTATCGGCCCTCTGCTCTGGGCCCCCATGAGCGAGCTCTGGG
GCCGTCAATACCTCTTCTTTGTCAGCTATTGTGGGCTGGCGGCGTTCAAC
GCCGGCATCACCGGCTCCAAGAACATCGAGACCCTTATCGTCCTACGCTT
CTTCGCGGGCGCGTTCGGATCGTCGCCCTTGACAAACGCCGGAGGAGTGG
TGGCGGATCTGTTTCCCGCGAAGCAGCGGGGGTTGGCCATGAGTATCTTC
GCAGCGGCACCGTTTATGGGTCCAACCATCGGCCCGGTTTGCGGAGGCTT
CCTGGGGATGAACGCGGGGTGGAAGTGGGTAATGGGCTTCTTGGCTGCTT
TTTCCGGTCTTCTCTGGATCATCGGTAGTCTGGTGGTGCCGGAGACCTAC
GCCCCGGTGTTGTTACAGCAGCGCGCAAAGAAGCTGACCAAGGTGACGGG
AAAGATTCATCGAAGCAAGACGGAGGCGGAGAAGGGGAAGGTGCCCTATT
CCACCGTCTTCAAGACAGCCCTGTCGCGGCCGTGGCTTCTTCTGTTCCGC
GAGCCGATCGTCTTCCTATTATCCATATACATGGCAATTATCTATGGGAC
GTTATACATGATGTTCGCAGCATTCCCAATTGTGTACGAGGAGCTACGCG
GTTGGAACCAGGGCGTCTCGGGTCTATCATTCCTGGGGGTCATGGTAGGC
ATGAACATAGCAGTCCTGTACAGCATCTGGGATAATAAGCGGTATGAAAG
GACTGATGAAGCTCACAAAGGATTTGCACCTCCAGAAGCGCGTCTCCCTC
CATGTCTGATGGCCTCGGTGATGATCCCCTTGGGCCTCTTCTGGTTCGCT
TGGACCAATTACCCTTCGATCCACTTCATGGCGAGTATCGCGGCCTGTGT
GCCTTTCGGGTTCGGAATGGTGCTGGTCTTCCTCAGCTTAATGAACTACC
TTATTGATGCCTACACCATCTTCGCAGCCTCGGTGCTGGCCGCCAATTCA
GTTCTGCGCTCGATCTTTGGCGCCGTCTTCCCGCTCTTCACGACCTACAT
GTACCACAACCTGGGGGTTCACTGGGCCTCCAGCATTCCCGCATTCCTGG
CGCTCGCGTGCGTGCCATTTCCTTTTCTATTTTATAAATATGGCCCGGCG
ATCCGAACTCGGTGCAAATATTCAGCGCAGTCGGATGCCTTTATGAGGAG
GCTGATGGAGCAAAGCACGCGAGACAATCGTCAGCCGGAGCCGGAGAAAG
AAGAAGCTGCGGAGAAAGAGACAGAAGTGTCGCCGGTTCAGGCCTCTTCA
TCTACGCTCGGGGAGAAGTCGCGACTCGGTGATCTCCCTGCCGTGGCAGC
CGAAGACACTGCTCGGACCCACTCGATAGCGTCGCAAGGGTCGCGGCGAC
CGGGCTCTGTGAAGGCAGAGTCTGTGTACGAAGGGAATCCGTATGACGTT
GACCGAGTGAATACTCGTGAGTCTTTCAAAGATTGA back to topCoding sequence (CDS) from alignment at ch5:678622..680457- >KYF_006467-T1 ID=KYF_006467-T1|Name=KYF_006467-T1|organism=Aspergillus niger KYF3|type=CDS|length=1836bp|location=Sequence derived from alignment at ch5:678622..680457- (Aspergillus niger KYF3)
ATGGCTGGTGACAACCCCCCCGCTGCTGGGGAGCCGGCCATGCCCACCCG
AATTTCTTACTGGCGCCTTCTGCTCGACCAGGGCGTGCTTACCCAAGAAA
TCCTCGATTATCCATGGGAGGGCTCTGGCACGGAAGACGACCCATACCTC
GTCACCTGGATTCCTAACGATCCTCGCAATCCCATGAATTTCCCCGCCTG
GCGCAAATGGCTGTATACTATAACCGTGGCTTGGGCCACACTCGCTGTGT
CATTGGTCTCGTCAGCGTACAGTGGAGGAGTCGAGCAAATAATGGAAAGT
TTTCATGTGGGCACTGAGGTAGCCACGCTCGGCATTTCGCTCTTCGTGCT
GGGCTTCGCTATCGGCCCTCTGCTCTGGGCCCCCATGAGCGAGCTCTGGG
GCCGTCAATACCTCTTCTTTGTCAGCTATTGTGGGCTGGCGGCGTTCAAC
GCCGGCATCACCGGCTCCAAGAACATCGAGACCCTTATCGTCCTACGCTT
CTTCGCGGGCGCGTTCGGATCGTCGCCCTTGACAAACGCCGGAGGAGTGG
TGGCGGATCTGTTTCCCGCGAAGCAGCGGGGGTTGGCCATGAGTATCTTC
GCAGCGGCACCGTTTATGGGTCCAACCATCGGCCCGGTTTGCGGAGGCTT
CCTGGGGATGAACGCGGGGTGGAAGTGGGTAATGGGCTTCTTGGCTGCTT
TTTCCGGTCTTCTCTGGATCATCGGTAGTCTGGTGGTGCCGGAGACCTAC
GCCCCGGTGTTGTTACAGCAGCGCGCAAAGAAGCTGACCAAGGTGACGGG
AAAGATTCATCGAAGCAAGACGGAGGCGGAGAAGGGGAAGGTGCCCTATT
CCACCGTCTTCAAGACAGCCCTGTCGCGGCCGTGGCTTCTTCTGTTCCGC
GAGCCGATCGTCTTCCTATTATCCATATACATGGCAATTATCTATGGGAC
GTTATACATGATGTTCGCAGCATTCCCAATTGTGTACGAGGAGCTACGCG
GTTGGAACCAGGGCGTCTCGGGTCTATCATTCCTGGGGGTCATGGTAGGC
ATGAACATAGCAGTCCTGTACAGCATCTGGGATAATAAGCGGTATGAAAG
GACTGATGAAGCTCACAAAGGATTTGCACCTCCAGAAGCGCGTCTCCCTC
CATGTCTGATGGCCTCGGTGATGATCCCCTTGGGCCTCTTCTGGTTCGCT
TGGACCAATTACCCTTCGATCCACTTCATGGCGAGTATCGCGGCCTGTGT
GCCTTTCGGGTTCGGAATGGTGCTGGTCTTCCTCAGCTTAATGAACTACC
TTATTGATGCCTACACCATCTTCGCAGCCTCGGTGCTGGCCGCCAATTCA
GTTCTGCGCTCGATCTTTGGCGCCGTCTTCCCGCTCTTCACGACCTACAT
GTACCACAACCTGGGGGTTCACTGGGCCTCCAGCATTCCCGCATTCCTGG
CGCTCGCGTGCGTGCCATTTCCTTTTCTATTTTATAAATATGGCCCGGCG
ATCCGAACTCGGTGCAAATATTCAGCGCAGTCGGATGCCTTTATGAGGAG
GCTGATGGAGCAAAGCACGCGAGACAATCGTCAGCCGGAGCCGGAGAAAG
AAGAAGCTGCGGAGAAAGAGACAGAAGTGTCGCCGGTTCAGGCCTCTTCA
TCTACGCTCGGGGAGAAGTCGCGACTCGGTGATCTCCCTGCCGTGGCAGC
CGAAGACACTGCTCGGACCCACTCGATAGCGTCGCAAGGGTCGCGGCGAC
CGGGCTCTGTGAAGGCAGAGTCTGTGTACGAAGGGAATCCGTATGACGTT
GACCGAGTGAATACTCGTGAGTCTTTCAAAGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:678622..680457 - |
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