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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1332823..1334222- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006648-T1 ID=KYF_006648-T1|Name=KYF_006648-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch5:1332823..1334222- (Aspergillus niger KYF3)
ATGGATCCCAAATATTCCGAAACGGTCGTCGTTGAGAGCCACAATGATAA
GGTCGAAAGCACGCAGGATGTCCAAGGTTACGCGGATCTCGACCCGGAAG
AACTGAAGGCTCTCGAAACCCGCATCCGATGGAAAACCGATTTGCGCCTC
TGCACCATTGCTGGCACTCTTTGCAGTCTCAATCTGCTTGATTCGGGCAT
CTTGTCATCAGCCTCGGTTACCAGCATGCCCGATGACCTGGATCTTATTG
GCACACGATACTCCGTTTCTGTCTTCATCTTCACCATCGCCAGCGTCGTC
TTCCAGCTGCCGTCGACCATCGCAGTCCGCTGGGTCGGCCCACGCATCTG
GTTTGCATGCATCGCCTTCGCCTTCGGACTGATCACAATGTGCACCGCCT
TTATCCACACCTGGAAGGAGATGATCGCCCTCCGCGTGCTCTTGGGTATG
TCCATGTCGGGGATTTACCCAGGTCTGACCTATCTCATTAGCGCCTGGTA
CCCGCGACGGGAGCAGCAGCTGCGGTTCGCTTTGATGCAGTCAGGCGAAG
TCATCGGTCTTGCGACGGGCTACATCGTGAACTATGGCCTCGAACTGTTG
GATGGGAGAGCTGGCATGCAAGGCTGGCGCTGGATGTACCTCGTGCAGGG
CCTCATCAGCTGCGTCATCGGAATAGCCACTTACTGGTGGATCATCGACT
TCCCAGAGAATGCGCATCGCAGTTTCTGCTTCATGTCCGAACTGGAGGCC
CGCGTCGCCGCTCAGCGCATCAAGGCAGACCGTGACGATATCGTTCCGGA
CCCGTTTTCATGGCGCAAGGTTCTCGCACCTTTCGCCGACCCGAAGCTGT
ACGGCTTTGCATGCATGTATTTCCTGCTAAACCTAGTATCAACTGCACTG
AACTATTTCCTTCCAATGATCCTCGAGGACGGCATGGGATTCTCGAGCAA
CGATTCGATTCTCCTATCCACACCGGTAAGCCCCTCACCTTCACATCTTC
TATCTATAGCCCTATACTAACGGCTTAGTAGCCCTACTACTGGGCCGTCA
TCCCAGTCATATTCACCTCCTTCGTCGGAGACAGATACCGCATCCGCGGC
CCACTCATCGCCTTCAACGCCCTCTGCCTCATCGCCGGGTTCCTCATGTT
CGGCCTCCCATCCTCCACCCAAGTCACCGTCCGATACATAGGAACGTTTC
TCGCGACAGGAGCATACGTCTCCAACTGGGCAGCTTTGAATGCCTTTATG
GCCAACAACGTCGTCGGCCAATGGAACCGCGCAACAACGGCGGCGGCAGT
CTCAGCCTGTAACGGCCTGGGCGGCGTTGCGGGTAGCTACATCGTACGAC
AGCAGGAAGCACCGCGCTATGAGACGGCAGTGTGGGTTTCTATCGGGTAA
back to topCoding sequence (CDS) from alignment at ch5:1332823..1334222- >KYF_006648-T1 ID=KYF_006648-T1|Name=KYF_006648-T1|organism=Aspergillus niger KYF3|type=CDS|length=2688bp|location=Sequence derived from alignment at ch5:1332823..1334222- (Aspergillus niger KYF3)
CCCTACTACTGGGCCGTCATCCCAGTCATATTCACCTCCTTCGTCGGAGA
CAGATACCGCATCCGCGGCCCACTCATCGCCTTCAACGCCCTCTGCCTCA
TCGCCGGGTTCCTCATGTTCGGCCTCCCATCCTCCACCCAAGTCACCGTC
CGATACATAGGAACGTTTCTCGCGACAGGAGCATACGTCTCCAACTGGGC
AGCTTTGAATGCCTTTATGGCCAACAACGTCGTCGGCCAATGGAACCGCG
CAACAACGGCGGCGGCAGTCTCAGCCTGTAACGGCCTGGGCGGCGTTGCG
GGTAGCTACATCGTACGACAGCAGGAAGCACCGCGCTATGAGACGGCAGT
GTGGGTTTCTATCGGGTAAATGGATCCCAAATATTCCGAAACGGTCGTCG
TTGAGAGCCACAATGATAAGGTCGAAAGCACGCAGGATGTCCAAGGTTAC
GCGGATCTCGACCCGGAAGAACTGAAGGCTCTCGAAACCCGCATCCGATG
GAAAACCGATTTGCGCCTCTGCACCATTGCTGGCACTCTTTGCAGTCTCA
ATCTGCTTGATTCGGGCATCTTGTCATCAGCCTCGGTTACCAGCATGCCC
GATGACCTGGATCTTATTGGCACACGATACTCCGTTTCTGTCTTCATCTT
CACCATCGCCAGCGTCGTCTTCCAGCTGCCGTCGACCATCGCAGTCCGCT
GGGTCGGCCCACGCATCTGGTTTGCATGCATCGCCTTCGCCTTCGGACTG
ATCACAATGTGCACCGCCTTTATCCACACCTGGAAGGAGATGATCGCCCT
CCGCGTGCTCTTGGGTATGTCCATGTCGGGGATTTACCCAGGTCTGACCT
ATCTCATTAGCGCCTGGTACCCGCGACGGGAGCAGCAGCTGCGGTTCGCT
TTGATGCAGTCAGGCGAAGTCATCGGTCTTGCGACGGGCTACATCGTGAA
CTATGGCCTCGAACTGTTGGATGGGAGAGCTGGCATGCAAGGCTGGCGCT
GGATGTACCTCGTGCAGGGCCTCATCAGCTGCGTCATCGGAATAGCCACT
TACTGGTGGATCATCGACTTCCCAGAGAATGCGCATCGCAGTTTCTGCTT
CATGTCCGAACTGGAGGCCCGCGTCGCCGCTCAGCGCATCAAGGCAGACC
GTGACGATATCGTTCCGGACCCGTTTTCATGGCGCAAGGTTCTCGCACCT
TTCGCCGACCCGAAGCTGTACGGCTTTGCATGCATGTATTTCCTGCTAAA
CCTAGTATCAACTGCACTGAACTATTTCCTTCCAATGATCCTCGAGGACG
GCATGGGATTCTCGAGCAACGATTCGATTCTCCTATCCACACCGCCCTAC
TACTGGGCCGTCATCCCAGTCATATTCACCTCCTTCGTCGGAGACAGATA
CCGCATCCGCGGCCCACTCATCGCCTTCAACGCCCTCTGCCTCATCGCCG
GGTTCCTCATGTTCGGCCTCCCATCCTCCACCCAAGTCACCGTCCGATAC
ATAGGAACGTTTCTCGCGACAGGAGCATACGTCTCCAACTGGGCAGCTTT
GAATGCCTTTATGGCCAACAACGTCGTCGGCCAATGGAACCGCGCAACAA
CGGCGGCGGCAGTCTCAGCCTGTAACGGCCTGGGCGGCGTTGCGGGTAGC
TACATCGTACGACAGCAGGAAGCACCGCGCTATGAGACGGCAGTGTGGGT
TTCTATCGGGTAAATGGATCCCAAATATTCCGAAACGGTCGTCGTTGAGA
GCCACAATGATAAGGTCGAAAGCACGCAGGATGTCCAAGGTTACGCGGAT
CTCGACCCGGAAGAACTGAAGGCTCTCGAAACCCGCATCCGATGGAAAAC
CGATTTGCGCCTCTGCACCATTGCTGGCACTCTTTGCAGTCTCAATCTGC
TTGATTCGGGCATCTTGTCATCAGCCTCGGTTACCAGCATGCCCGATGAC
CTGGATCTTATTGGCACACGATACTCCGTTTCTGTCTTCATCTTCACCAT
CGCCAGCGTCGTCTTCCAGCTGCCGTCGACCATCGCAGTCCGCTGGGTCG
GCCCACGCATCTGGTTTGCATGCATCGCCTTCGCCTTCGGACTGATCACA
ATGTGCACCGCCTTTATCCACACCTGGAAGGAGATGATCGCCCTCCGCGT
GCTCTTGGGTATGTCCATGTCGGGGATTTACCCAGGTCTGACCTATCTCA
TTAGCGCCTGGTACCCGCGACGGGAGCAGCAGCTGCGGTTCGCTTTGATG
CAGTCAGGCGAAGTCATCGGTCTTGCGACGGGCTACATCGTGAACTATGG
CCTCGAACTGTTGGATGGGAGAGCTGGCATGCAAGGCTGGCGCTGGATGT
ACCTCGTGCAGGGCCTCATCAGCTGCGTCATCGGAATAGCCACTTACTGG
TGGATCATCGACTTCCCAGAGAATGCGCATCGCAGTTTCTGCTTCATGTC
CGAACTGGAGGCCCGCGTCGCCGCTCAGCGCATCAAGGCAGACCGTGACG
ATATCGTTCCGGACCCGTTTTCATGGCGCAAGGTTCTCGCACCTTTCGCC
GACCCGAAGCTGTACGGCTTTGCATGCATGTATTTCCTGCTAAACCTAGT
ATCAACTGCACTGAACTATTTCCTTCCAATGATCCTCGAGGACGGCATGG
GATTCTCGAGCAACGATTCGATTCTCCTATCCACACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1332823..1334222 - |
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