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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1480377..1481945+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_006697-T1 ID=KYF_006697-T1|Name=KYF_006697-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1569bp|location=Sequence derived from alignment at ch5:1480377..1481945+ (Aspergillus niger KYF3)
ATGGAAACTAAAAGACGAAGACACTACGCCCCAAGATCCCGCACCGGATG
TCGGACCTGTCGGACGAGAAGAGTCAAATGCGATGAGGCTCCTGGAGCGT
GCAAGAACTGCACCTCCACCGGACGGACTTGTGATGGGTACGACTTGACC
AGACTCCCAAATGTCGCCGGGTATTTGCTCAATGCTAGTCCCCCAAAGTT
TCAGCTTCGAATCAGTCTCCCTGGAATGAGTTCAGATGAGCGCCGGTGCT
TTACCTACTTCCAAACACACACTGTGCCTAGGATGGTGGGGTTCTATGAT
TCGGAGCTTTGGCAGCGACTGGCACTCCAGATGAGCCAAGCCGAAACCGC
TGTCTGCCATGCGGTCGTTGCTCTGGGGGCCCTGCATCAAGACTCAGAAG
CTAGAGGAACGACGCTGCAGAAAGTTGACCTGGATCGTAATGATCACCAT
CGCTTCGCCCTCGAGCAATACAGCAGGGCCATTACTGCCCTACAAAAACG
CCTGCCGTCAAACGATCCGCAGGTGCGCCTGGCTGTGCTAATGTGCTGTG
TCGCGTTCATTTTCTTCGAATACCTTCAAGGCAATCGGGGGAAAGCGTTC
ACTCATCTTCAGAATGGGCTTCATGTTTTGGCGAACCGTAAGGGGGACGA
GGCACGTACCCTTGTACTGTCAAAAGTCCTCCAGCCGGTCCAAGAATCTA
CTGCCGAAAGGGCATTTCTGCGAGCGTTCGCGCAGCTGGATGCTCAATCC
GCGCACTTCAGAGTATCTGGCTCCGTTACTACTTTGGGGGCACAGAATGG
CTATTTGACTACAGACATTCTCAACCAAGAATTCGACTTCCAAAGCTTGG
AGGACGTAAAAGACAAGTTAGATCCCCTGGGAAGTGTCGTCTTCCGCTTT
CGTACCACCTGTCGTCCATTGCTCCGAAATCCAATGGTCGACGTCCTGCA
ACTATCAGTCCAGCACCACAGGATACGGACTCAGCTAATGAAACATATCT
CAGCCTTTGAGACATTCAGCGCACAATTTCATCCATCCAAGATGACCGCC
AAGGAAGCACGCAGCATGGACATGATAAGGCTTCACCATATCGTCTTGAT
GGTGGATCTGGAAACTATGCTCAGCCTGTCAGAGCTCGTATATGACTCTT
ATCTACCACAATTCCGAACATTCGTGAACTTTTGTGAGCGCATCATAAAC
AGCATGAGGGCAGAGTACGGCACGAATCTTACCAAGATAGTGACCGACAT
GGGCGTCATTGCTCCACTAAGCTGGACAAGTCTCCGGTGTCGAGATCTCC
CAACTCGACAGCGAGCATTAAGTCTACTTGATTCTTGGCCCCACTGCGAA
GGGCCGTATGACTCTCGATTCTTCGCTACTCTGGCACGTCAGGTAGTTGC
AATCGAGAGCGAGGGCGAGATAGCCGGCTTCATTCCAGAACATGCTCGTG
TGCGCGATACGTCTCTGGAGATGTTAGGGAATGGACTCCATGCAGTGCTA
TTGTATACGTTATCGGACCCGAACAAGATGAATCTCGAAATGCATCGACG
GCCGTTTCGCTTCCGATGA back to topCoding sequence (CDS) from alignment at ch5:1480377..1481945+ >KYF_006697-T1 ID=KYF_006697-T1|Name=KYF_006697-T1|organism=Aspergillus niger KYF3|type=CDS|length=1569bp|location=Sequence derived from alignment at ch5:1480377..1481945+ (Aspergillus niger KYF3)
ATGGAAACTAAAAGACGAAGACACTACGCCCCAAGATCCCGCACCGGATG
TCGGACCTGTCGGACGAGAAGAGTCAAATGCGATGAGGCTCCTGGAGCGT
GCAAGAACTGCACCTCCACCGGACGGACTTGTGATGGGTACGACTTGACC
AGACTCCCAAATGTCGCCGGGTATTTGCTCAATGCTAGTCCCCCAAAGTT
TCAGCTTCGAATCAGTCTCCCTGGAATGAGTTCAGATGAGCGCCGGTGCT
TTACCTACTTCCAAACACACACTGTGCCTAGGATGGTGGGGTTCTATGAT
TCGGAGCTTTGGCAGCGACTGGCACTCCAGATGAGCCAAGCCGAAACCGC
TGTCTGCCATGCGGTCGTTGCTCTGGGGGCCCTGCATCAAGACTCAGAAG
CTAGAGGAACGACGCTGCAGAAAGTTGACCTGGATCGTAATGATCACCAT
CGCTTCGCCCTCGAGCAATACAGCAGGGCCATTACTGCCCTACAAAAACG
CCTGCCGTCAAACGATCCGCAGGTGCGCCTGGCTGTGCTAATGTGCTGTG
TCGCGTTCATTTTCTTCGAATACCTTCAAGGCAATCGGGGGAAAGCGTTC
ACTCATCTTCAGAATGGGCTTCATGTTTTGGCGAACCGTAAGGGGGACGA
GGCACGTACCCTTGTACTGTCAAAAGTCCTCCAGCCGGTCCAAGAATCTA
CTGCCGAAAGGGCATTTCTGCGAGCGTTCGCGCAGCTGGATGCTCAATCC
GCGCACTTCAGAGTATCTGGCTCCGTTACTACTTTGGGGGCACAGAATGG
CTATTTGACTACAGACATTCTCAACCAAGAATTCGACTTCCAAAGCTTGG
AGGACGTAAAAGACAAGTTAGATCCCCTGGGAAGTGTCGTCTTCCGCTTT
CGTACCACCTGTCGTCCATTGCTCCGAAATCCAATGGTCGACGTCCTGCA
ACTATCAGTCCAGCACCACAGGATACGGACTCAGCTAATGAAACATATCT
CAGCCTTTGAGACATTCAGCGCACAATTTCATCCATCCAAGATGACCGCC
AAGGAAGCACGCAGCATGGACATGATAAGGCTTCACCATATCGTCTTGAT
GGTGGATCTGGAAACTATGCTCAGCCTGTCAGAGCTCGTATATGACTCTT
ATCTACCACAATTCCGAACATTCGTGAACTTTTGTGAGCGCATCATAAAC
AGCATGAGGGCAGAGTACGGCACGAATCTTACCAAGATAGTGACCGACAT
GGGCGTCATTGCTCCACTAAGCTGGACAAGTCTCCGGTGTCGAGATCTCC
CAACTCGACAGCGAGCATTAAGTCTACTTGATTCTTGGCCCCACTGCGAA
GGGCCGTATGACTCTCGATTCTTCGCTACTCTGGCACGTCAGGTAGTTGC
AATCGAGAGCGAGGGCGAGATAGCCGGCTTCATTCCAGAACATGCTCGTG
TGCGCGATACGTCTCTGGAGATGTTAGGGAATGGACTCCATGCAGTGCTA
TTGTATACGTTATCGGACCCGAACAAGATGAATCTCGAAATGCATCGACG
GCCGTTTCGCTTCCGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1480377..1481945 + |
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