You are here

Home

KYF_006736-T1, KYF_006736-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006736-T1
Unique NameKYF_006736-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1596480..1597539+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006736-T1 ID=KYF_006736-T1|Name=KYF_006736-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1060bp|location=Sequence derived from alignment at ch5:1596480..1597539+ (Aspergillus niger KYF3)
ATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCGGCTCTATT
GTGAGTTTATTGCTCCAGACTGGGCGTGATTTGATGTGAAATGCTGATGT
GATCGACTCGCACCTCTAGCTACTGGATTGTGTTCCCTATCACTGTTGTT
ATGGTATGCGAGCCCTCCTCTACTCTATAAGAGACAGGGATATATGCTAA
TCGTATATTCCACAGATTCTGACAGGTATCCTCCGTCACTATGCCACCGT
CCTGATGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCG
AACGTCTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTG
CTCTCGAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTA
CCAGAGCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTG
CAAATCCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATGATG
AAGGGGAATATGATGATGATGATCCCACAGACGCTGATTATGAGCTGGAT
TAATGCGTTCTTTTCGGGTTTCGTGATTTGTAGGTCTTATCTGATATGTT
TTTGGAAAGGGAGTGAGCTGACAAGAGTGCTAGTGAAATTGCCCTTCCCG
CTTACCATTCGGTTCAAGTCAATGCTGCAGTCTGGTGTTATGACCCGGGA
TTTGGATGTTAGATGGGTGTCCAGTCTTTCGTGGTATTTCTTGAACTTGT
TTGGACTGCAGTCGGTCTTTGGGTTTATTTTGGGCAGTGATAATGGTTAG
TTCACTGTGTTTGCCTCATTATCGTTTCTATTATCTTTGTTTGAGTGTGC
TGACAGTTTGCTTTAGCGGCCAACCACATGGCTTCGCAGATGGCGTCGAT
GAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATA
AGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGC
ATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAA
AAGCTATTAG
back to top

Coding sequence (CDS) from alignment at ch5:1596480..1597539+

>KYF_006736-T1 ID=KYF_006736-T1|Name=KYF_006736-T1|organism=Aspergillus niger KYF3|type=CDS|length=4020bp|location=Sequence derived from alignment at ch5:1596480..1597539+ (Aspergillus niger KYF3)
ATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCGGCTCTATT
CTACTGGATTGTGTTCCCTATCACTGTTGTTATGATTCTGACAGGTATCC
TCCGTCACTATGCCACCGTCCTGATGAACAACCCCCCGAAGCCGGCTTCG
ACGCTGGCCGAATCCCGCGAACGTCTCGGACTCATTCGCGGCGTCAACCT
CCGGAACAACGCCTCCGTGCTCTCGAAGGAGTCCTTCGAGATGCGGAAGA
ACTACCTCGTTTCTGCCTACCAGAGCGGCGCTTTCCTCAAGGACCCTGCT
AGTCGCGGCCAGCCGCCTGCAAATCCAATGACCGATCCTGCTGGCATGGA
GGCCATGATGGGCATGATGAAGGGGAATATGATGATGATGATCCCACAGA
CGCTGATTATGAGCTGGATTAATGCGTTCTTTTCGGGTTTCGTGATTTTG
AAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTGCAGTCTGG
TGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCTTTCGTGGT
ATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTATTTTGGGC
AGTGATAATGCGGCCAACCACATGGCTTCGCAGATGGCGTCGATGAACCC
TGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAGTTGT
ACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCATTCTG
GACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAAGCTA
TTAGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCGGCTC
TATTCTACTGGATTGTGTTCCCTATCACTGTTGTTATGATTCTGACAGGT
ATCCTCCGTCACTATGCCACCGTCCTGATGAACAACCCCCCGAAGCCGGC
TTCGACGCTGGCCGAATCCCGCGAACGTCTCGGACTCATTCGCGGCGTCA
ACCTCCGGAACAACGCCTCCGTGCTCTCGAAGGAGTCCTTCGAGATGCGG
AAGAACTACCTCGTTTCTGCCTACCAGAGCGGCGCTTTCCTCAAGGACCC
TGCTAGTCGCGGCCAGCCGCCTGCAAATCCAATGACCGATCCTGCTGGCA
TGGAGGCCATGATGGGCATGATGAAGGGGAATATGATGATGATGATCCCA
CAGACGCTGATTATGAGCTGGATTAATGCGTTCTTTTCGGGTTTCGTGAT
TTTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTGCAGT
CTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCTTTCG
TGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTATTTT
GGGCAGTGATAATGCGGCCAACCACATGGCTTCGCAGATGGCGTCGATGA
ACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAG
TTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCAT
TCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAA
GCTATTAGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCG
GCTCTATTCTACTGGATTGTGTTCCCTATCACTGTTGTTATGATTCTGAC
AGGTATCCTCCGTCACTATGCCACCGTCCTGATGAACAACCCCCCGAAGC
CGGCTTCGACGCTGGCCGAATCCCGCGAACGTCTCGGACTCATTCGCGGC
GTCAACCTCCGGAACAACGCCTCCGTGCTCTCGAAGGAGTCCTTCGAGAT
GCGGAAGAACTACCTCGTTTCTGCCTACCAGAGCGGCGCTTTCCTCAAGG
ACCCTGCTAGTCGCGGCCAGCCGCCTGCAAATCCAATGACCGATCCTGCT
GGCATGGAGGCCATGATGGGCATGATGAAGGGGAATATGATGATGATGAT
CCCACAGACGCTGATTATGAGCTGGATTAATGCGTTCTTTTCGGGTTTCG
TGATTTTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTG
CAGTCTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCT
TTCGTGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTA
TTTTGGGCAGTGATAATGCGGCCAACCACATGGCTTCGCAGATGGCGTCG
ATGAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGA
TAAGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTT
GCATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGG
AAAAGCTATTAGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGA
TCCGGCTCTATTCTACTGGATTGTGTTCCCTATCACTGTTGTTATGATTC
TGACAGGTATCCTCCGTCACTATGCCACCGTCCTGATGAACAACCCCCCG
AAGCCGGCTTCGACGCTGGCCGAATCCCGCGAACGTCTCGGACTCATTCG
CGGCGTCAACCTCCGGAACAACGCCTCCGTGCTCTCGAAGGAGTCCTTCG
AGATGCGGAAGAACTACCTCGTTTCTGCCTACCAGAGCGGCGCTTTCCTC
AAGGACCCTGCTAGTCGCGGCCAGCCGCCTGCAAATCCAATGACCGATCC
TGCTGGCATGGAGGCCATGATGGGCATGATGAAGGGGAATATGATGATGA
TGATCCCACAGACGCTGATTATGAGCTGGATTAATGCGTTCTTTTCGGGT
TTCGTGATTTTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAAT
GCTGCAGTCTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCA
GTCTTTCGTGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGG
TTTATTTTGGGCAGTGATAATGCGGCCAACCACATGGCTTCGCAGATGGC
GTCGATGAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATC
CCGATAAGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCAC
TTTTGCATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGG
TAGGAAAAGCTATTAGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTC
GGGATCCGGCTCTATTCTACTGGATTGTGTTCCCTATCACTGTTGTTATG
ATTCTGACAGGTATCCTCCGTCACTATGCCACCGTCCTGATGAACAACCC
CCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCGAACGTCTCGGACTCA
TTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTGCTCTCGAAGGAGTCC
TTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTACCAGAGCGGCGCTTT
CCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTGCAAATCCAATGACCG
ATCCTGCTGGCATGGAGGCCATGATGGGCATGATGAAGGGGAATATGATG
ATGATGATCCCACAGACGCTGATTATGAGCTGGATTAATGCGTTCTTTTC
GGGTTTCGTGATTTTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGT
CAATGCTGCAGTCTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTG
TCCAGTCTTTCGTGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTT
TGGGTTTATTTTGGGCAGTGATAATGCGGCCAACCACATGGCTTCGCAGA
TGGCGTCGATGAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAG
GATCCCGATAAGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGA
GCACTTTTGCATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACG
CGGGTAGGAAAAGCTATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006736KYF_006736Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006736-T1KYF_006736-T1-proteinAspergillus niger KYF3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006736-T1.exon1KYF_006736-T1.exon1Aspergillus niger KYF3exon
KYF_006736-T1.exon2KYF_006736-T1.exon2Aspergillus niger KYF3exon
KYF_006736-T1.exon3KYF_006736-T1.exon3Aspergillus niger KYF3exon
KYF_006736-T1.exon4KYF_006736-T1.exon4Aspergillus niger KYF3exon
KYF_006736-T1.exon5KYF_006736-T1.exon5Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006736-T1.cdsKYF_006736-T1.cdsAspergillus niger KYF3CDS


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG0926431P
DBxrefInterPro:IPR008568
DBxrefInterPro:IPR002809
DBxrefPFAM:PF01956
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1596480..1597539 +
Powered by Drupal