You are here

Home

KYF_006818-T1, KYF_006818-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_006818-T1
Unique NameKYF_006818-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1895604..1897265+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_006818-T1 ID=KYF_006818-T1|Name=KYF_006818-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1662bp|location=Sequence derived from alignment at ch5:1895604..1897265+ (Aspergillus niger KYF3)
ATGTCTATCACAAGCCTGCCCGTAGAGATATTGACTCGCATTTGTGAGCA
TCTAGAGCCTCAAGAGTGGGGTGCGCTTCGGATTACATGCCACCAAATAT
ATGGCAATACACTGGAGGCCTATGCGACGCGCTACTTCAAAATTCTCTCA
CTTCTTCTTACTCGTGATAGCCTTGGCCATCTGGTGGAGGTTGCAGCAAG
TGAAACTCTTCGGGATTGGGTTCAAGAAATTTGGATCATTCCTAATTTGT
TTGAGGGTTGGCCACAAAAGGATAAGGAGAATTTCAAAAGCTTGGGTTTG
TCAATGAGGAAACAGAGAAGAATGTTAAGAATGATGCGCGGTGAAAAGGA
GGAATCAACATCAACCAATGCTGAGGCTGAGCTTGACGCTCTATTTGCCG
CTTACGAAGGTACATTAGCAGAGCACCGTGCTATCCTTGACTCAGAACTT
CTTGGGGTCCTTGAAGAATGCCTGCCGCGCCTCAAGAACGTCACCACGGT
CGGATTACGGTCTTACCCCCTTGAATTCCTCCTCTCGAAAGCAAACTATC
GTTCATTTCGCTGCCTTGGCTTACGGGAATTGAAGAAGTTCAGCACCGAT
GATGTACGTGGTCATTTGACATTCGCAAGTTTTCGCAAGGATATGTTGTC
CCCGCCTTTTGGCTTGGCAATCTCACAGGTGCTTCATGCCATAATTAAAT
CCAATCGGAAGGTCCGATCCCTCCATACGTGCGGCAATTACGCTTGCGGG
ATGAACTTGGGGTCCTTGAAATTGCCAGAGTCAAGGTATAGATTACTGTT
GCCACTCTTGAGCGATCTGACGGCTCTTCATATGTGTATCCGCATTAAGG
ATCACGAACAAGATAAATTCGAGGAAGAGACCTTCAAACGTCTTCTCAAT
ATTCTGGTCACAGTTGCACCAAAATTGAAGATACTGACATTTGCCCAATG
GAGCCCCTGGGAAGAATTATCCCCCCTGTACTTTGAGGATCTCTCCGAGA
AGATCCGGTTTTCCCAGCTAGAGGAAATTCATCTCCACTCGATTGAGGTG
ACAGTGGATACGCTTAGACAATTTCTTCAAACAGCAGCGCCAACCTTGAA
ACGGCTGAGTATGAATATGGTCAGCTTGACGGATGCGATAATTGCAGCGC
GAGATCCAGGGCCAATCACTGAAGAGAGAAGTAGTTGGGGCTCTTCATTG
TCCACTGAAGTGATAAACGAGATAAAGATGCTCTGGATGCGGAGCTTTCA
GTTTCTGGCAGATAATCTGGAGCTGCAATTTGTCCAGTTGTCTAAACTTG
GTTACCGTGGAAGAGAGATAAAGCTGCAAGATGACTTATATATGGAACGT
GGGCAGCCGGATGCACAGCCGGATTCATGTGCACGGCCTTCTATCGAACC
GCACGATTTCTATTCTGATCCAAAGGGTGGCCAATCGCTAGATTTCTATT
TTGATGCTGAGAGAGCGAGTATACCTCTCACACGATGGATCATGCAGCTT
CAAATAGAGATGTGCAATCCGTTGAGCCGTGCACCTTGCCGACTCCCAGG
GACCAGCGGTATGAGCTTCAATCGGGAAGGGATGAGGTCCCTTATTATGT
ACCCACCAGGGCATGTGCCAGTGGAAGATCCTGGAAGACGGTCGGCGATT
TTAGAGTTCTAG
back to top

Coding sequence (CDS) from alignment at ch5:1895604..1897265+

>KYF_006818-T1 ID=KYF_006818-T1|Name=KYF_006818-T1|organism=Aspergillus niger KYF3|type=CDS|length=1662bp|location=Sequence derived from alignment at ch5:1895604..1897265+ (Aspergillus niger KYF3)
ATGTCTATCACAAGCCTGCCCGTAGAGATATTGACTCGCATTTGTGAGCA
TCTAGAGCCTCAAGAGTGGGGTGCGCTTCGGATTACATGCCACCAAATAT
ATGGCAATACACTGGAGGCCTATGCGACGCGCTACTTCAAAATTCTCTCA
CTTCTTCTTACTCGTGATAGCCTTGGCCATCTGGTGGAGGTTGCAGCAAG
TGAAACTCTTCGGGATTGGGTTCAAGAAATTTGGATCATTCCTAATTTGT
TTGAGGGTTGGCCACAAAAGGATAAGGAGAATTTCAAAAGCTTGGGTTTG
TCAATGAGGAAACAGAGAAGAATGTTAAGAATGATGCGCGGTGAAAAGGA
GGAATCAACATCAACCAATGCTGAGGCTGAGCTTGACGCTCTATTTGCCG
CTTACGAAGGTACATTAGCAGAGCACCGTGCTATCCTTGACTCAGAACTT
CTTGGGGTCCTTGAAGAATGCCTGCCGCGCCTCAAGAACGTCACCACGGT
CGGATTACGGTCTTACCCCCTTGAATTCCTCCTCTCGAAAGCAAACTATC
GTTCATTTCGCTGCCTTGGCTTACGGGAATTGAAGAAGTTCAGCACCGAT
GATGTACGTGGTCATTTGACATTCGCAAGTTTTCGCAAGGATATGTTGTC
CCCGCCTTTTGGCTTGGCAATCTCACAGGTGCTTCATGCCATAATTAAAT
CCAATCGGAAGGTCCGATCCCTCCATACGTGCGGCAATTACGCTTGCGGG
ATGAACTTGGGGTCCTTGAAATTGCCAGAGTCAAGGTATAGATTACTGTT
GCCACTCTTGAGCGATCTGACGGCTCTTCATATGTGTATCCGCATTAAGG
ATCACGAACAAGATAAATTCGAGGAAGAGACCTTCAAACGTCTTCTCAAT
ATTCTGGTCACAGTTGCACCAAAATTGAAGATACTGACATTTGCCCAATG
GAGCCCCTGGGAAGAATTATCCCCCCTGTACTTTGAGGATCTCTCCGAGA
AGATCCGGTTTTCCCAGCTAGAGGAAATTCATCTCCACTCGATTGAGGTG
ACAGTGGATACGCTTAGACAATTTCTTCAAACAGCAGCGCCAACCTTGAA
ACGGCTGAGTATGAATATGGTCAGCTTGACGGATGCGATAATTGCAGCGC
GAGATCCAGGGCCAATCACTGAAGAGAGAAGTAGTTGGGGCTCTTCATTG
TCCACTGAAGTGATAAACGAGATAAAGATGCTCTGGATGCGGAGCTTTCA
GTTTCTGGCAGATAATCTGGAGCTGCAATTTGTCCAGTTGTCTAAACTTG
GTTACCGTGGAAGAGAGATAAAGCTGCAAGATGACTTATATATGGAACGT
GGGCAGCCGGATGCACAGCCGGATTCATGTGCACGGCCTTCTATCGAACC
GCACGATTTCTATTCTGATCCAAAGGGTGGCCAATCGCTAGATTTCTATT
TTGATGCTGAGAGAGCGAGTATACCTCTCACACGATGGATCATGCAGCTT
CAAATAGAGATGTGCAATCCGTTGAGCCGTGCACCTTGCCGACTCCCAGG
GACCAGCGGTATGAGCTTCAATCGGGAAGGGATGAGGTCCCTTATTATGT
ACCCACCAGGGCATGTGCCAGTGGAAGATCCTGGAAGACGGTCGGCGATT
TTAGAGTTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_006818KYF_006818Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006818-T1.exon1KYF_006818-T1.exon1Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_006818-T1.cdsKYF_006818-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_006818-T1KYF_006818-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001810
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1895604..1897265 +
Powered by Drupal