|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2633730..2634741- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_007064-T1 ID=KYF_007064-T1|Name=KYF_007064-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1012bp|location=Sequence derived from alignment at ch5:2633730..2634741- (Aspergillus niger KYF3)
ATGGGTGTCACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGC
CATCCTCAATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCC
AGGACTATGTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCC
AACCTGGCCTTGCTGAAGTTGTGAGTTCATGCGCCTTTCTATCCAGTTCA
AAACACTTTCAGCCGAAACATAAAGAGCTCCGACGCGGGGAACCATTTTG
GTTTTATGTGATGAAGAATCTTATATCATTATCACGTTTCCTATTACCTG
ACACCCTACTTTGGGGGATGTCGAGACTCCAATTCTCCTGAAACAAAACC
ATGATCTCAACTTTTATTCTATCGCATGTACATCATACCTGAATAGCGAT
GCTAACCCCTTCACGCCCTCTGACAGGTACCAGTTCAACCCCCACCTTCT
CCAGGCGGAGACCGTCACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCC
CCTCTCCCGCTTTCTCCCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAG
CCCTTCCAGGCCTCCGACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGA
CTTCGTCGAGTCGATCCAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGT
CTGCCCAGTACACCCAGTTCTGGTCCACCCTGAACTCGGACGACCTGTAC
GCTGACCTTGTTGCCGACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCG
CATTGCCGTCGAGGTCGGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTC
TGGAGCAGTGGCTCGACCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTC
GCCGAGGTCTGCAGCTGGGAGGTTGACAAGTCTGGCGCCAACACCGTGAT
CAAGGTGCCCACCAACAAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCG
AGCGCGTCGGCGTCGACATGTTCGGCCGTGTCATCCGCCGTGGTTTCGAG
CAGGCTGCATGA back to topCoding sequence (CDS) from alignment at ch5:2633730..2634741- >KYF_007064-T1 ID=KYF_007064-T1|Name=KYF_007064-T1|organism=Aspergillus niger KYF3|type=CDS|length=1512bp|location=Sequence derived from alignment at ch5:2633730..2634741- (Aspergillus niger KYF3)
GTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCAACGTCC
TCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTCTGCCTT
GCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGCTGAGGC
CCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGAAGCTCG
CCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTCTGGTCC
ACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGTTGCCGG
ATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCAAGACCT
TCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTGCGCAGC
CGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGAGGTTGA
CAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGGAGAACG
AGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATGTTCGGC
CGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGTCACCTT
CGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCAATGGCC
TCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTATGTCGCC
CAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGCCTTGCT
GAAGTTGTACCAGTTCAACCCCCACCTTCTCCAGGCGGAGACCGTCACCA
ACGTCCTCGTCAAGGCCCTGACTGTCTTCCCCTCTCCCGCTTTCTCCCTC
TGCCTTGCTCTTCTCCCCGCCCACACTCAGCCCTTCCAGGCCTCCGACGC
TGAGGCCCAGGCCGCCGCCCAGACCTCCGACTTCGTCGAGTCGATCCAGA
AGCTCGCCCGCCTCTCCACCCTCCTCGAGTCTGCCCAGTACACCCAGTTC
TGGTCCACCCTGAACTCGGACGACCTGTACGCTGACCTTGTTGCCGACGT
TGCCGGATTCGAGGAGCTCGTGCGCATCCGCATTGCCGTCGAGGTCGGCA
AGACCTTCCGTGAGATCCCTGCCGAGGTTCTGGAGCAGTGGCTCGACCTG
CGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGCCGAGGTCTGCAGCTGGGA
GGTTGACAAGTCTGGCGCCAACACCGTGATCAAGGTGCCCACCAACAAGG
AGAACGAGGCCCGCAGCGAGGTCAAGAGCGAGCGCGTCGGCGTCGACATG
TTCGGCCGTGTCATCCGCCGTGGTTTCGAGCAGGCTGCATGAATGGGTGT
CACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGCCATCCTCA
ATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCCAGGACTAT
GTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCCAACCTGGC
CTTGCTGAAGTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005852 | eukaryotic translation initiation factor 3 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006446 | regulation of translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043022 | ribosome binding |
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR000717 |
| DBxref | InterPro:IPR009374 |
| DBxref | InterPro:IPR016020 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR033464 |
| DBxref | PFAM:PF10075 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2633730..2634741 - |
|
