|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:417783..419232- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_007463-T1 ID=KYF_007463-T1|Name=KYF_007463-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1450bp|location=Sequence derived from alignment at ch6:417783..419232- (Aspergillus niger KYF3) ATGCATCTAGGCAACAGCTTGAGTTTGCTCTGCCTCGCAGCACCCGGCCT
CGTCGCCTCTATTTCTTCCTCTCCTCTATCCACCTCGGGCCGATGGATCG
TCGACACCGACGGAAACAATGTCACCTACGCAGGGGTCAACTGGCCCGGT
GCTGAGGTGGCCATGTTGCCAGAAGGTCTGCAGTATCAGTCCATCGAGTA
TATCGTCGGCAAGATCAAGGATTTGGGTATGAACGTCATCAGGCTTACCT
TTGCCATTGAGATGATCGATGACATCTACGAGACTGGAGCGGACGTACCG
ATTAAGACGTCATTGATTAACGCTCTGGGTGAGACAAATGGAACCAAGAT
CTACGACGATATCGTCAGTAATAACCCGCAATTTGGGGAGAATACTACAC
GACTAGAGGTGAGCCATATATTTCAACGCTTAGTGTCTTGTCTTCAAATA
TTGACGGAGTTTAGGTCTACGATGCAGTAGCCAATGAATGCTACAGTCAG
GGCATTTACGTACATCTGGACAACCACGTCTCCAAAGCAAGTTGGTGTTG
CTCGACCACCGACGGAAATGCCTGGTTCGGAGACACCTACTTCAACGTGA
GCAATTGGCATAGGGGGTGGAAATATATGACTGAGCACGTAAGCAGCGTA
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTCCAATCCTCACAGCTA
ACGTAACTCCAAAACAGGTCAAATCCCTGCCAGCCGTAAAAAGCATCGGT
ATGCGCAATGAACTCCGCAGCCCAGACGACAACACCACACTCGCAGACGA
CACCTACAATTGGGAGACATGGTACAGCAACATGGTCGAGAACGCGAACC
AAGTGCACTCCGTCAATTCAGACCTACTTCTATTCTTCTCAGGTCTCAAC
TACGATGTCACACTCTCACCGATCCCGACAGCCTCAGATTTAGGCGACGG
CACGGTCTTCAAGAAGAGCGATTTTGATTTCGCCGATAAGATCGTACTAG
AGCTTCACAACTATGACTCCTCTGCTACCAGCTGTAGTAGTCTGTCATCT
AGCTTGCTGAGCGACGGCTTCGATGCTCTAGAGACGAATGATTCGAGCAT
TGTAAATGTGCTTCCGGTCGTAATGACCGAGTTCGGATACGCGCAGGATG
ATACCACCTATACAGAAGTTTATGCCTCGTGCTTGAGGGAATGGTTGCCT
AGTGTGCATGCTGGATGGATGATTTGGGTGCTTTCGGGAAGTTATTATGT
CCGAGAGGGAATACAGGATTATGATGAGACTTGGGGTAAATTTACCTGTT
CTGGTCCTTGAAGTGCAGAGTTATGCAGAGTTCGTGCAAAGCGACTAACT
ATGATTACTAGGCCTACTCGATCATACGTGGTCTGGATGGCGATCAACCG
AGGCAATTGATAATGGCATCATTCCTATGGTCAACGCGAGTCTGGGGTAG
back to topCoding sequence (CDS) from alignment at ch6:417783..419232- >KYF_007463-T1 ID=KYF_007463-T1|Name=KYF_007463-T1|organism=Aspergillus niger KYF3|type=CDS|length=4956bp|location=Sequence derived from alignment at ch6:417783..419232- (Aspergillus niger KYF3) GCCTACTCGATCATACGTGGTCTGGATGGCGATCAACCGAGGCAATTGAT AATGGCATCATTCCTATGGTCAACGCGAGTCTGGGGTAGGTCAAATCCCT GCCAGCCGTAAAAAGCATCGGTATGCGCAATGAACTCCGCAGCCCAGACG ACAACACCACACTCGCAGACGACACCTACAATTGGGAGACATGGTACAGC AACATGGTCGAGAACGCGAACCAAGTGCACTCCGTCAATTCAGACCTACT TCTATTCTTCTCAGGTCTCAACTACGATGTCACACTCTCACCGATCCCGA CAGCCTCAGATTTAGGCGACGGCACGGTCTTCAAGAAGAGCGATTTTGAT TTCGCCGATAAGATCGTACTAGAGCTTCACAACTATGACTCCTCTGCTAC CAGCTGTAGTAGTCTGTCATCTAGCTTGCTGAGCGACGGCTTCGATGCTC TAGAGACGAATGATTCGAGCATTGTAAATGTGCTTCCGGTCGTAATGACC GAGTTCGGATACGCGCAGGATGATACCACCTATACAGAAGTTTATGCCTC GTGCTTGAGGGAATGGTTGCCTAGTGTGCATGCTGGATGGATGATTTGGG TGCTTTCGGGAAGTTATTATGTCCGAGAGGGAATACAGGATTATGATGAG ACTTGGGGTCTACGATGCAGTAGCCAATGAATGCTACAGTCAGGGCATTT ACGTACATCTGGACAACCACGTCTCCAAAGCAAGTTGGTGTTGCTCGACC ACCGACGGAAATGCCTGGTTCGGAGACACCTACTTCAACGTGAGCAATTG GCATAGGGGGTGGAAATATATGACTGAGCACATGCATCTAGGCAACAGCT TGAGTTTGCTCTGCCTCGCAGCACCCGGCCTCGTCGCCTCTATTTCTTCC TCTCCTCTATCCACCTCGGGCCGATGGATCGTCGACACCGACGGAAACAA TGTCACCTACGCAGGGGTCAACTGGCCCGGTGCTGAGGTGGCCATGTTGC CAGAAGGTCTGCAGTATCAGTCCATCGAGTATATCGTCGGCAAGATCAAG GATTTGGGTATGAACGTCATCAGGCTTACCTTTGCCATTGAGATGATCGA TGACATCTACGAGACTGGAGCGGACGTACCGATTAAGACGTCATTGATTA ACGCTCTGGGTGAGACAAATGGAACCAAGATCTACGACGATATCGTCAGT AATAACCCGCAATTTGGGGAGAATACTACACGACTAGAGGCCTACTCGAT CATACGTGGTCTGGATGGCGATCAACCGAGGCAATTGATAATGGCATCAT TCCTATGGTCAACGCGAGTCTGGGGTAGGTCAAATCCCTGCCAGCCGTAA AAAGCATCGGTATGCGCAATGAACTCCGCAGCCCAGACGACAACACCACA CTCGCAGACGACACCTACAATTGGGAGACATGGTACAGCAACATGGTCGA GAACGCGAACCAAGTGCACTCCGTCAATTCAGACCTACTTCTATTCTTCT CAGGTCTCAACTACGATGTCACACTCTCACCGATCCCGACAGCCTCAGAT TTAGGCGACGGCACGGTCTTCAAGAAGAGCGATTTTGATTTCGCCGATAA GATCGTACTAGAGCTTCACAACTATGACTCCTCTGCTACCAGCTGTAGTA GTCTGTCATCTAGCTTGCTGAGCGACGGCTTCGATGCTCTAGAGACGAAT GATTCGAGCATTGTAAATGTGCTTCCGGTCGTAATGACCGAGTTCGGATA CGCGCAGGATGATACCACCTATACAGAAGTTTATGCCTCGTGCTTGAGGG AATGGTTGCCTAGTGTGCATGCTGGATGGATGATTTGGGTGCTTTCGGGA AGTTATTATGTCCGAGAGGGAATACAGGATTATGATGAGACTTGGGGTCT ACGATGCAGTAGCCAATGAATGCTACAGTCAGGGCATTTACGTACATCTG GACAACCACGTCTCCAAAGCAAGTTGGTGTTGCTCGACCACCGACGGAAA TGCCTGGTTCGGAGACACCTACTTCAACGTGAGCAATTGGCATAGGGGGT GGAAATATATGACTGAGCACATGCATCTAGGCAACAGCTTGAGTTTGCTC TGCCTCGCAGCACCCGGCCTCGTCGCCTCTATTTCTTCCTCTCCTCTATC CACCTCGGGCCGATGGATCGTCGACACCGACGGAAACAATGTCACCTACG CAGGGGTCAACTGGCCCGGTGCTGAGGTGGCCATGTTGCCAGAAGGTCTG CAGTATCAGTCCATCGAGTATATCGTCGGCAAGATCAAGGATTTGGGTAT GAACGTCATCAGGCTTACCTTTGCCATTGAGATGATCGATGACATCTACG AGACTGGAGCGGACGTACCGATTAAGACGTCATTGATTAACGCTCTGGGT GAGACAAATGGAACCAAGATCTACGACGATATCGTCAGTAATAACCCGCA ATTTGGGGAGAATACTACACGACTAGAGGCCTACTCGATCATACGTGGTC TGGATGGCGATCAACCGAGGCAATTGATAATGGCATCATTCCTATGGTCA ACGCGAGTCTGGGGTAGGTCAAATCCCTGCCAGCCGTAAAAAGCATCGGT ATGCGCAATGAACTCCGCAGCCCAGACGACAACACCACACTCGCAGACGA CACCTACAATTGGGAGACATGGTACAGCAACATGGTCGAGAACGCGAACC AAGTGCACTCCGTCAATTCAGACCTACTTCTATTCTTCTCAGGTCTCAAC TACGATGTCACACTCTCACCGATCCCGACAGCCTCAGATTTAGGCGACGG CACGGTCTTCAAGAAGAGCGATTTTGATTTCGCCGATAAGATCGTACTAG AGCTTCACAACTATGACTCCTCTGCTACCAGCTGTAGTAGTCTGTCATCT AGCTTGCTGAGCGACGGCTTCGATGCTCTAGAGACGAATGATTCGAGCAT TGTAAATGTGCTTCCGGTCGTAATGACCGAGTTCGGATACGCGCAGGATG ATACCACCTATACAGAAGTTTATGCCTCGTGCTTGAGGGAATGGTTGCCT AGTGTGCATGCTGGATGGATGATTTGGGTGCTTTCGGGAAGTTATTATGT CCGAGAGGGAATACAGGATTATGATGAGACTTGGGGTCTACGATGCAGTA GCCAATGAATGCTACAGTCAGGGCATTTACGTACATCTGGACAACCACGT CTCCAAAGCAAGTTGGTGTTGCTCGACCACCGACGGAAATGCCTGGTTCG GAGACACCTACTTCAACGTGAGCAATTGGCATAGGGGGTGGAAATATATG ACTGAGCACATGCATCTAGGCAACAGCTTGAGTTTGCTCTGCCTCGCAGC ACCCGGCCTCGTCGCCTCTATTTCTTCCTCTCCTCTATCCACCTCGGGCC GATGGATCGTCGACACCGACGGAAACAATGTCACCTACGCAGGGGTCAAC TGGCCCGGTGCTGAGGTGGCCATGTTGCCAGAAGGTCTGCAGTATCAGTC CATCGAGTATATCGTCGGCAAGATCAAGGATTTGGGTATGAACGTCATCA GGCTTACCTTTGCCATTGAGATGATCGATGACATCTACGAGACTGGAGCG GACGTACCGATTAAGACGTCATTGATTAACGCTCTGGGTGAGACAAATGG AACCAAGATCTACGACGATATCGTCAGTAATAACCCGCAATTTGGGGAGA ATACTACACGACTAGAGGCCTACTCGATCATACGTGGTCTGGATGGCGAT CAACCGAGGCAATTGATAATGGCATCATTCCTATGGTCAACGCGAGTCTG GGGTAGGTCAAATCCCTGCCAGCCGTAAAAAGCATCGGTATGCGCAATGA ACTCCGCAGCCCAGACGACAACACCACACTCGCAGACGACACCTACAATT GGGAGACATGGTACAGCAACATGGTCGAGAACGCGAACCAAGTGCACTCC GTCAATTCAGACCTACTTCTATTCTTCTCAGGTCTCAACTACGATGTCAC ACTCTCACCGATCCCGACAGCCTCAGATTTAGGCGACGGCACGGTCTTCA AGAAGAGCGATTTTGATTTCGCCGATAAGATCGTACTAGAGCTTCACAAC TATGACTCCTCTGCTACCAGCTGTAGTAGTCTGTCATCTAGCTTGCTGAG CGACGGCTTCGATGCTCTAGAGACGAATGATTCGAGCATTGTAAATGTGC TTCCGGTCGTAATGACCGAGTTCGGATACGCGCAGGATGATACCACCTAT ACAGAAGTTTATGCCTCGTGCTTGAGGGAATGGTTGCCTAGTGTGCATGC TGGATGGATGATTTGGGTGCTTTCGGGAAGTTATTATGTCCGAGAGGGAA TACAGGATTATGATGAGACTTGGGGTCTACGATGCAGTAGCCAATGAATG CTACAGTCAGGGCATTTACGTACATCTGGACAACCACGTCTCCAAAGCAA GTTGGTGTTGCTCGACCACCGACGGAAATGCCTGGTTCGGAGACACCTAC TTCAACGTGAGCAATTGGCATAGGGGGTGGAAATATATGACTGAGCACAT GCATCTAGGCAACAGCTTGAGTTTGCTCTGCCTCGCAGCACCCGGCCTCG TCGCCTCTATTTCTTCCTCTCCTCTATCCACCTCGGGCCGATGGATCGTC GACACCGACGGAAACAATGTCACCTACGCAGGGGTCAACTGGCCCGGTGC TGAGGTGGCCATGTTGCCAGAAGGTCTGCAGTATCAGTCCATCGAGTATA TCGTCGGCAAGATCAAGGATTTGGGTATGAACGTCATCAGGCTTACCTTT GCCATTGAGATGATCGATGACATCTACGAGACTGGAGCGGACGTACCGAT TAAGACGTCATTGATTAACGCTCTGGGTGAGACAAATGGAACCAAGATCT ACGACGATATCGTCAGTAATAACCCGCAATTTGGGGAGAATACTACACGA CTAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
Note | EggNog:ENOG41 |
Note | SECRETED:SignalP(1-23) |
Note | CAZy:GH5_51 |
Note | CAZy:GH5_24 |
Note | CAZy:GH5 |
Note | CAZy:GH5_11 |
Note | CAZy:GH5_16 |
DBxref | InterPro:IPR017853 |
DBxref | InterPro:IPR001547 |
DBxref | PFAM:PF00150 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:417783..419232 - |
|