You are here

Home

KYF_007678-T1, KYF_007678-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_007678-T1
Unique NameKYF_007678-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:1309973..1311059+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_007678-T1 ID=KYF_007678-T1|Name=KYF_007678-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1087bp|location=Sequence derived from alignment at ch6:1309973..1311059+ (Aspergillus niger KYF3)
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGGTGCGTTATACGACTCTCAATATGGCGAAT
AGCCATGGGAAATCATCCATGATCGGTCATTCTTAACACCTTACTCAGCA
CGCCCTTCTCGTGCCCCCCGACGTCCGCGTGGCGACCGCTACTCCCCCTC
TCCCGAACAGTATGTTTATCCAGTGGCGCTTCGGTGAACGAAGCTGACCT
GTACAGACACAGCACTGCATCTAGCGGAGCTAAACTTCGTGTTGAGAACA
TCCATTACGACATTACAGAAACCGATCTCGAGGTAGGCCTCATTCCAGTC
CCCGCGTTTTTTCCTACTGAGCTCTGACATATGCAATGTAAAAGGACCTG
TTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCGTTTACGACCGGGC
AGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACTCATATCGGCGATG
CGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGCCAAAGGCCAGCCT
ATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGACGCGACCGCAACCC
ATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTTGACCGCGTCGAGA
GACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGGTAGTAGGAGCGGC
AGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTCGCGGTGGTGGCGG
CGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCTCCCGAGCACATTG
ACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAACCGCGGCGCTACG
AACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGGGCGACAGCCGTCG
CATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAGCTCGATCAAGAAA
TGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGCCGGCGCAGCTGAT
AAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCACCGGCGTCTGCGGC
CGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
back to top

Coding sequence (CDS) from alignment at ch6:1309973..1311059+

>KYF_007678-T1 ID=KYF_007678-T1|Name=KYF_007678-T1|organism=Aspergillus niger KYF3|type=CDS|length=3600bp|location=Sequence derived from alignment at ch6:1309973..1311059+ (Aspergillus niger KYF3)
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
ATGGGATCGCTGATGCGTTTGTCGACATACAGTGACTGGGTTCATGACAA
GTACGAAGACGACAGAGATGCACGCCCTTCTCGTGCCCCCCGACGTCCGC
GTGGCGACCGCTACTCCCCCTCTCCCGAACAACACAGCACTGCATCTAGC
GGAGCTAAACTTCGTGTTGAGAACATCCATTACGACATTACAGAAACCGA
TCTCGAGGACCTGTTCACCCGCATCGGACCAATCAGTAATGTTTCTCTCG
TTTACGACCGGGCAGGACGTTCCGAAGGAGTCGCCTTTGTGACCTACACT
CATATCGGCGATGCGCGAACCGCGATTAGAGAATTCGACGGCGCAAACGC
CAAAGGCCAGCCTATTCGTTTAACACTGATCTCTACCGGTGCCGGAAGAC
GCGACCGCAACCCATTTGACAACGTGGAACGCTCGAAGGGAAGTCTATTT
GACCGCGTCGAGAGACCCCGTGACCGCGACGCACGGAGTCTCAGCCCCGG
TAGTAGGAGCGGCAGTCCTGATGGAGGTGCACGCCGCCGTCGTGGTCGTC
GCGGTGGTGGCGGCGGCGGGTACCGGCGCAGTGACGTCTCCAAACCGGCT
CCCGAGCACATTGACAGATACATTCCTGGTCAGCGGTCGCCGACTCGCAA
CCGCGGCGCTACGAACGGGCGCCGCCAAGGCGGTGGAGGTGAGAACAAGG
GCGACAGCCGTCGCATGGTTAACGGACGGCCCAGAAAGACACAGGAAGAG
CTCGATCAAGAAATGGACGATTACTGGGGTGGCTCCGGCAACGCTGGTGC
CGGCGCAGCTGATAAAGAAGTTGTCCCTGACGAGCCTCAGCAGATTGCAC
CGGCGTCTGCGGCCGCTGCTGGTGATGATGATATCGACATGATTGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_007678KYF_007678Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007678-T1.exon1KYF_007678-T1.exon1Aspergillus niger KYF3exon
KYF_007678-T1.exon2KYF_007678-T1.exon2Aspergillus niger KYF3exon
KYF_007678-T1.exon3KYF_007678-T1.exon3Aspergillus niger KYF3exon
KYF_007678-T1.exon4KYF_007678-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_007678-T1.cdsKYF_007678-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_007678-T1KYF_007678-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR025715
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:1309973..1311059 +
Powered by Drupal