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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2517947..2518767- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008040-T1 ID=KYF_008040-T1|Name=KYF_008040-T1|organism=Aspergillus niger KYF3|type=mRNA|length=821bp|location=Sequence derived from alignment at ch6:2517947..2518767- (Aspergillus niger KYF3)
ATGGTATGTGTGCTGCGTGACCCTCACCTCTCCCTCGAACCAACCTAGCT
GACAGACCTCCTCCACAGAGTTCCCCTTTCGATATCAGTATGTACTAGCT
TCGCACAGCTTACCATCATGACTATTAACTCTCGGATGAACAGATGGCGG
TGCCTGCGTCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGATC
TCCGGTTGGGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGATC
TTCAACTACGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCGA
CGTGTCGACTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGCC
TCCGCGAGGAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAGT
TCGTCGTTATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCAT
TGCCGGAATCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGACA
GTATCGGGTGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGCC
AGTGAGCAGCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGGT
AAGACTACTCCCTTTTGGAGAAAAAAAAATAACTGAAGATGGTGATGTAT
CGAGTCTGTACTAACATTCTGATGTAGTCCCCCGAGGACCTGTTCGAGAC
CATCTCGCAAGCCTTGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTT
GGGGTGCACAGGTGTATATCATAGAAAAGGACAAGGTGACCAAGCGTCTA
CTGAAGGGAAGGCAAGATTAG back to topCoding sequence (CDS) from alignment at ch6:2517947..2518767- >KYF_008040-T1 ID=KYF_008040-T1|Name=KYF_008040-T1|organism=Aspergillus niger KYF3|type=CDS|length=2484bp|location=Sequence derived from alignment at ch6:2517947..2518767- (Aspergillus niger KYF3)
TCCCCCGAGGACCTGTTCGAGACCATCTCGCAAGCCTTGCTCAGCGCCGT
CGATCGAGACGCCCTTTCCGGTTGGGGTGCACAGGTGTATATCATAGAAA
AGGACAAGGTGACCAAGCGTCTACTGAAGGGAAGGCAAGATTAGATGGCG
GTGCCTGCGTCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGAT
CTCCGGTTGGGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGAT
CTTCAACTACGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCG
ACGTGTCGACTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGC
CTCCGCGAGGAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAG
TTCGTCGTTATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCA
TTGCCGGAATCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGAC
AGTATCGGGTGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGC
CAGTGAGCAGCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGA
GTTCCCCTTTCGATATCAATGTCCCCCGAGGACCTGTTCGAGACCATCTC
GCAAGCCTTGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTTGGGGTG
CACAGGTGTATATCATAGAAAAGGACAAGGTGACCAAGCGTCTACTGAAG
GGAAGGCAAGATTAGATGGCGGTGCCTGCGTCGCCATGGTGGGCAAGGAC
TGCGTCGCAATCGCCTGTGATCTCCGGTTGGGTATGCAGGCCCTGACTGT
CTCCAACAACTTCCCCAAGATCTTCAACTACGGCCCCTCCACCTTCCTCG
GTCTGACCGGCCTGGCCACCGACGTGTCGACTGTGTCCGACCTTTTCCGG
TACAAGGTCAACATGTACCGCCTCCGCGAGGAACGGAACATTGCCCCCCA
GACTCTCGCCAACCTGGTCAGTTCGTCGTTATACGAGAAACGGTTCGGTC
CTTTCTTCGTCAGCCCCGTCATTGCCGGAATCAACAGCACAACGGGGAAG
CCTTTCATCTGCGGATTTGACAGTATCGGGTGTATCGATTTTGCGAAGGA
CTTCATTGTTAGCGGAACTGCCAGTGAGCAGCTGTTTGGTACCTGCGAGG
GTCTGTGGGAGCCGGACTTGAGTTCCCCTTTCGATATCAATGTCCCCCGA
GGACCTGTTCGAGACCATCTCGCAAGCCTTGCTCAGCGCCGTCGATCGAG
ACGCCCTTTCCGGTTGGGGTGCACAGGTGTATATCATAGAAAAGGACAAG
GTGACCAAGCGTCTACTGAAGGGAAGGCAAGATTAGATGGCGGTGCCTGC
GTCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGATCTCCGGTT
GGGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGATCTTCAACT
ACGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCGACGTGTCG
ACTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGCCTCCGCGA
GGAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAGTTCGTCGT
TATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCATTGCCGGA
ATCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGACAGTATCGG
GTGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGCCAGTGAGC
AGCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGAGTTCCCCT
TTCGATATCAATGTCCCCCGAGGACCTGTTCGAGACCATCTCGCAAGCCT
TGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTTGGGGTGCACAGGTG
TATATCATAGAAAAGGACAAGGTGACCAAGCGTCTACTGAAGGGAAGGCA
AGATTAGATGGCGGTGCCTGCGTCGCCATGGTGGGCAAGGACTGCGTCGC
AATCGCCTGTGATCTCCGGTTGGGTATGCAGGCCCTGACTGTCTCCAACA
ACTTCCCCAAGATCTTCAACTACGGCCCCTCCACCTTCCTCGGTCTGACC
GGCCTGGCCACCGACGTGTCGACTGTGTCCGACCTTTTCCGGTACAAGGT
CAACATGTACCGCCTCCGCGAGGAACGGAACATTGCCCCCCAGACTCTCG
CCAACCTGGTCAGTTCGTCGTTATACGAGAAACGGTTCGGTCCTTTCTTC
GTCAGCCCCGTCATTGCCGGAATCAACAGCACAACGGGGAAGCCTTTCAT
CTGCGGATTTGACAGTATCGGGTGTATCGATTTTGCGAAGGACTTCATTG
TTAGCGGAACTGCCAGTGAGCAGCTGTTTGGTACCTGCGAGGGTCTGTGG
GAGCCGGACTTGAGTTCCCCTTTCGATATCAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0019774 | proteasome core complex, beta-subunit complex |
| GO:0005839 | proteasome core complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004175 | endopeptidase activity |
| GO:0004298 | threonine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G4X |
| Note | MEROPS:MER0001710 |
| DBxref | InterPro:IPR033811 |
| DBxref | InterPro:IPR023333 |
| DBxref | InterPro:IPR016050 |
| DBxref | InterPro:IPR029055 |
| DBxref | InterPro:IPR001353 |
| DBxref | PFAM:PF00227 |
| Product | proteasome core particle subunit beta 3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2517947..2518767 - |
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