|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2561749..2563434+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_008056-T1 ID=KYF_008056-T1|Name=KYF_008056-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1686bp|location=Sequence derived from alignment at ch6:2561749..2563434+ (Aspergillus niger KYF3)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCGTACGTTGAACCTCGGACTCAAGTGT
GGACAAATTCTTCAGTGCTAACTCAGAGACCCAACTTAGTTTCGTCGACT
GCCCCGGTCACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTC
ATGGACGCTGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACC
TCAGACTTCGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACA
TCATCATTTTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTG
CAACATTACCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGG
CTCTCCGATCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTG
TCAACGAATACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACC
GCTTCCCCCCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGG
TGCCGAAATTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGA
CTGGTGTTCTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTC
ACCAAGGACGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGT
CATGTCCCTCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTG
GTTTGATTGGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGAT
CGTCTCGTTGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTA
CACTGAGTTGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCA
AGACTGCCGATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAG
GTTCTCATGGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGG
TGTCAAGGCTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCG
AGGTCGGAGAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGT
CTGATCGGTTGGGCCAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTA
GCTTGCGATTTCTTCCCAGCTCTTGAGAGAATGATGTTACTAATTACGGA
AACAGTGGTAACACCCTTGAGCCCATCCTGAACTAA back to topCoding sequence (CDS) from alignment at ch6:2561749..2563434+ >KYF_008056-T1 ID=KYF_008056-T1|Name=KYF_008056-T1|organism=Aspergillus niger KYF3|type=CDS|length=4626bp|location=Sequence derived from alignment at ch6:2561749..2563434+ (Aspergillus niger KYF3)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATA
TTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTC
CTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCA
CTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAA
ACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCG
ATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCC
CATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGG
TTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATG
ATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGA
GCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGC
AGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAAC
GGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGC
CGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCG
GTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTC
GTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGT
CAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCA
AGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAAC
ATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGC
TGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGA
TTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCC
AACATTGTCGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGC
CAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCG
ATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAG
GCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCC
CAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGT
CCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATC
AACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAA
GGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAA
ACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGAC
AACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAA
GGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGAC
TGTTGAGACATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATG
AGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTAT
TGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTG
CCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTG
GACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAA
GTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTG
CACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCAC
ATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCAT
TCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGG
GTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGAC
GAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGAT
TCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACA
ACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGT
GTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGG
TCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACT
TCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCC
AAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTC
TACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGC
TCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATC
AGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGT
CGCTGGTAACACCCTTGAGCCCATCCTGAACTAAATGGCTGCCAACGGCG
ACTTCTCTGACGACGAGTCCCAGCCTGGATCCCCCATGCTCGATGCGAAC
GGTCACGATGACATCGAAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCC
TCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGC
CAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCTGGACCTGTCCACCCTG
ACTCCTTTGACCCCCGAAATTATTGCGCGCCAAGCCACAATCAACATTGG
CACCATCGGTCACGTCGCTCACGGCAAGTCGACGGTCGTTAAGGCTATCT
CCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTTGGAGCGAAACATTACG
ATCAAGCTGGGTTATGCCAACGCAAAGATCTACAAGTGCGACAACCCCGA
GTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCG
ACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCGCTACAGACTGTTGAGA
CATGTGTCTTTCGTCGACTGCCCCGGTCACGATATTCTGATGAGTACTAT
GTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATTGCCGGAA
ACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGCCATCGAA
ATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGGACTTGAT
GAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAGTTCATCC
GTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGCACAGCTC
AAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACATTCCCGT
CCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATTCGTTCCT
TCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGGTGGTGTT
GCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACGAGATTGA
GATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATTCAGTGCC
GTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAACGACCTC
AAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTGTAGACCC
TACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGTCACCGCG
GACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTTCTTGCTT
CGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCAAGGTTGC
CAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCTACGGCTA
CCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCTCAGCTTG
ACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCAGTCGGAG
AATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTCGCTGGTA
ACACCCTTGAGCCCATCCTGAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261TPN |
| DBxref | InterPro:IPR009001 |
| DBxref | InterPro:IPR009000 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR004161 |
| DBxref | InterPro:IPR015256 |
| DBxref | InterPro:IPR000795 |
| DBxref | PFAM:PF03144 |
| DBxref | PFAM:PF00009 |
| DBxref | PFAM:PF09173 |
| Product | eukaryotic translation initiation factor 2 subunit gamma |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2561749..2563434 + |
|
